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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0135000 |
| Transcript ID | LotjaGi6g1v0135000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triose-phosphate transporter family protein; TAIR: AT3G11320.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320; TrEMBL-Plants: tr|I1KYT8|I1KYT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0135000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:38960351..38964860) extracted from Lotus japonicus Gifu genome v1.2.
CAAACACTTCACCCTCCAAAGAGCTTCTCACTCTGCATCATCCATTTTCATTCTCTCTCCCTGTCACTCCTTCTCCTTCC CAAATCAAAACCCATTTCCTCAATCCACCCTTCATTCCTCCCACATTATCAAAATACTCTCTTTATCCATCAAACTTTCT GACTTCAACTTCATTTTTTTTTTTACCTTTTTTCCTCCCTAATTCTCCTTTAGTTCATCTTAATTCTCCACACCATTTCA AATTTCATTTCAATGAAGATGGCATCAATCTCTGGAAAAGTGTTCACATTGGGGTTGATAAGCTTCTGGTATGCTTCCAA CATTGGAGTTCTGCTATTGAACAAGTACCTGCTGAGCAACTATGGGTTCAGGTATCCAATTTTCCTCACCCTGTGCCACA TGATGGCGTGCTCAATCCTCAGCTACGTTGCCATTTCATGGCTCAAAGTGGTGCCAATGCAGACGGTGCGGTCAAGGGTA CAATTTGTGAAGATATCATCTTTGGGGCTCATTTTCTGCTTGTCTGTGGTAGGAGGGAACATCTCCCTCCGTTACCTCCC GGTGTCGTTCAACCAGGCTGTCGGCGCCACCACGCCTTTTTTCACGGCAGTGTTTGCTTATTTGATGACCCTTAAGAGGG AGGGTTGGCTCACATACATGAGTCTTGTCCCTGTTGTTGCTGGTGTTATGATTGCTAGTGGGGTATGTAACTCTTATCTC CTTTGTTGTGGTGTATGCTTTTGGCGTGTGTTATGTATTGTGCTAGTTACAAAATGTTGTGGAGGATTTTTTGGTGTCCT CCTTCAGAGGCAATCATGTTCGAGCCGGGAACATCCACATCATGATGGGGCTAACTCTCCCAGCGGAGGTTTTTTCCATC CCACAAGACTCGAACCCGAGACCTTGCTTAAGGGGAATCAAGCATGTACCACATAGCAAAAATGGCTGGCCAGTGCATTA GAGCCCCCGTTATGCGTAGGGTCCGGGGAAGGCTCCGAGTCTAACCATTTGGTTTTTTGCATAATAGGCTGTTTCCATGA TTTCCTGACCTTAGTCACATAGCAACGACTTTTTACCATTGCGCCAAGGCTCCCCTTCTTCTTGATTAGTTAGTTGTAAC TTGTAATGGGATTTAAATCATTTGTCTTATTCTCTGTAGAAAAAGACTCATTAGCAAAAACAAGTAATTAGAAAGAGAAT ATTAACTCTTAGAAGAGTGGGGAATTTTTTGTTGTGTTGCTTTTTTATTTAAAGAAACAGGAATGAGACATGTGAAATGA ATAGGTTATTGTAATCAGTAACATTGTTATGCAATTATGTACTAGTATGTTGACAACTCTTAATTTATCGTTTGCTCTTA TAAAACATGAGCATGTGAATATGTGATGCAGAAATTATGCATGTGATGCGTGGTTAACTCTGTAATATGTAATGAGACTT AAGTGCATTACTTTGAGTGTTTATGCGATTTTCTTTTGTTTCTCTGGATTTTCTTTCTAGGTATATTCCTTGAAGTAGTT TTAGCCGGTTAATTTTGGAAATGAGTTAAGTTAGCTCTGCTTGAGATGATCTTTTCTAATGTCAGATTTGCTAGGCCAGT CAATGTCATGTCATTCTTGTGTATGAAAATGGGTTTCTGCTTGGAGTTACAAACTACATTTATTGATTTTTGTTATATTT TTTCTTACATGGATGAAGGGAGAACCAAGTTTTCATCTATTTGGATTTTTAATGTGCATTGGTGCTACAGCAGCCAGGGC ACTCAAAACAGTGCTTCAAGGGGTCTTGCTATCTTCTGAAGCGTAAGGAGCTGAAACTTTCTCCTGTCTATGTATTTGAA AATTGGTGGTTTCTCATCATGCACTGCTCATTGAATTGTTTCTTTGGTCTCTCAGGGAAAAGCTCAATTCTATGAACCTT CTCATGTACATGGCACCAGTGGCTGTTGCATTCCTTCTTCCAGCTTCAATTATTATGGAGGAAGATGTGGTTGGAATTAC AATTGCACTTGCTAGAGACGATTCGAAGATTTTGTGGTTACTTCTCTTCAATTCTTCCCTGGCATATTTTGTCAACTTGA CCAATTTTTTAGTTACAAACCACACCAGTGCATTAACACTTCAGGTATCACCCCTCTCCTTTCCTCCATTGAAATTATAG AAATTTCTCAATCCATCAAAATGAGAATAATAGCCATATATATGGTCATATGGAACTACAATTTCTTCATATTCTCACAT ACTTATTTGATCATTTATTTATTAGACAATAATTTACTAGACAATAATGATATTTTGATTGAATAGCAAAATGGATACAT GATAAAGTTGTTTTGCAAATGGATACATCTATTGAAAAGAGGTTTTGCAAAATTGTTTTGTGATGTGAAATATTACTCAT AAACATAAAAGATAAATAAGGTGATCGAGCTCATATGATGTTTTGCTTACCACTTTGTATTCTGTATTCCATTTATCTAA AAGTCTTACGAAGGTTATAAAGGTTGTCTTGAGTTAAAATAAATACAAACAGACTTTTCCTGTCTCCTTTTATTTTGATA TAAGCCTATTTTACTTGTTTCTGGCCAAACAACAAATTTTTGTGATTTCCTACATACTGCGTAAACAGTAGCATCTACAA CCCTGAACACCACTGCGAATAGGAATTTATGAGTAAATTAGTGAAACTCCTGAGGATATATTTTTCATCTTAATAGTCTG CTTTCAAAGTTGGACTTTTTCATTTGGGATTTTTTACCATGTGAGGTTTCGCATGATGAATCTTGACAAGTTTCTAATAT TTTCAATCTCAAATGAGTTCTTTCCTTAGTAGGGGAGAAAATGTACTAGTCATTTAATTGGTTTCTTTGAGGTAATAATA TACTCAGTATAATCTGTACATTCATATTCATATTGTACACCATTAACATGAAGGCATGACCCCTTTGACAGGTCCTAGGA AATGCGAAAGGAGCTGTGGCAGTTGTTATATCCATTTTGATTTTTCGAAATCCTGTATCAGTTACTGGAATGTTTGGATA TTCCCTCACAGTTATTGGAGTTATCCTGTATAGTGAAGCCAAGAAACGGAGTAAATGAGATATCTGCGTAATTTAACCGA GTTTTTGTCTCATTAGATCAATGTTGCTTCTGCCTTCTAGCCACTTTTTGAACTTCTCATGCGAGCATTGTAAATATTTC CTCATAAAATTCTTTTACAATTTAGTTTTTGAGTCATTGAAGATGTAAAGAATTCTACACCTTAAGCAAGTCACTAACAA ATTTTGAAATTGATCCTATGCAACATTTGCCTTCCTTCTTTGCCTCTTGTGTAGATTGACAGATAAATCTGAAGGAAGCA TGTAAATTTTGCACATTCATGCAATCACTAATTATCTAAACTTAATCTTTTTTATAATTTATTAAATCTGAGGCAGATTA AGTGGAGCTGCCACATCAAATTCTCTACTCTTAATCCATGCCACATAAGCAATTTTAAGCAGTTGGAGAACTCACATTTC TTTATTTCTCAACTTCCAAAGGTTCATTTTTAGTAATATTTCCAATTATACCATTTCAAAAAATAATTAGTGGTTTTATT TGAAAAGTGTTAGAACTGGTGCCGGCCAGAATAAAGGAATGAACACAAAATAGAAGAATGTCTCCAAGAATCAATGGATT CTTGAGAAAAGGTATTATTACTGAGAAAATGATACTAGTTCAGGGAGTTACAACTGAATCCAATATTCAGTTCCACCTAA CCAATAACTTCCCAAAAACTATCTTATCAAGTGTATTGACTTCCATTTATACTATCTAAGCTAACTCAGCTAGTTAGTTC CTAACTAGGAAGACCCTTGTTTCTGATGCCTTTTTAAAGGAGGTTTAACTTTCTGACTAAACCTATCACATATCCATTGG GAAGGGATAGCCCCAAGGTTGTTCTCCCCACTTCTGGATCACCCTAGAACTTGTTAGCTACGAAGAAACTGATGATGAAG GGTGGAAGTGAGGAAATGCAGGAGTCCATGCAAGAGATAGAGATTGTTGTTCCTTAAACAAGACCCTCATGGCTGGGCTA TTCTGAGTAAAGGTTCTCATGTGAAGCTTCTTGGTCAAGGTCAGAGCATGCTTTGTACTGTCAGATTTTGATATTTTGAT ACTTGGGAAGAGAAACCACACCAAGATGTGAGCTTCAATTCAATGAAGCTTTCAAGGTGTTCCATGGGAAATGCAAGATT TAAGATGTTCCTCACAAATGTGAATATAAGGAATCTGCTAACTATACTACTGATATTCTAGCTCACATACCATGCTCAAG TAAGTGTGACCAAGAAATGAAGGGCTTCTGTTAAGTACAGGTGTTACCATGGTTTTGAAGCAAACGATATTGAAGGAAGC TATGTAAATTTTGCACATAGTGCCTAATTATTTACCAACGACTACTCTGAACATATTTTGGCAGCTTCAGACAAACTATT ATGCCTTTGTGCTTTACTATTTCATTAAAG
CDS sequence (LotjaGi6g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATGGCATCAATCTCTGGAAAAGTGTTCACATTGGGGTTGATAAGCTTCTGGTATGCTTCCAACATTGGAGTTCT GCTATTGAACAAGTACCTGCTGAGCAACTATGGGTTCAGGTATCCAATTTTCCTCACCCTGTGCCACATGATGGCGTGCT CAATCCTCAGCTACGTTGCCATTTCATGGCTCAAAGTGGTGCCAATGCAGACGGTGCGGTCAAGGGTACAATTTGTGAAG ATATCATCTTTGGGGCTCATTTTCTGCTTGTCTGTGGTAGGAGGGAACATCTCCCTCCGTTACCTCCCGGTGTCGTTCAA CCAGGCTGTCGGCGCCACCACGCCTTTTTTCACGGCAGTGTTTGCTTATTTGATGACCCTTAAGAGGGAGGGTTGGCTCA CATACATGAGTCTTGTCCCTGTTGTTGCTGGTGTTATGATTGCTAGTGGGGGAGAACCAAGTTTTCATCTATTTGGATTT TTAATGTGCATTGGTGCTACAGCAGCCAGGGCACTCAAAACAGTGCTTCAAGGGGTCTTGCTATCTTCTGAAGCGGAAAA GCTCAATTCTATGAACCTTCTCATGTACATGGCACCAGTGGCTGTTGCATTCCTTCTTCCAGCTTCAATTATTATGGAGG AAGATGTGGTTGGAATTACAATTGCACTTGCTAGAGACGATTCGAAGATTTTGTGGTTACTTCTCTTCAATTCTTCCCTG GCATATTTTGTCAACTTGACCAATTTTTTAGTTACAAACCACACCAGTGCATTAACACTTCAGGTCCTAGGAAATGCGAA AGGAGCTGTGGCAGTTGTTATATCCATTTTGATTTTTCGAAATCCTGTATCAGTTACTGGAATGTTTGGATATTCCCTCA CAGTTATTGGAGTTATCCTGTATAGTGAAGCCAAGAAACGGAGTAAATGA
Protein sequence (LotjaGi6g1v0135000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMASISGKVFTLGLISFWYASNIGVLLLNKYLLSNYGFRYPIFLTLCHMMACSILSYVAISWLKVVPMQTVRSRVQFVK ISSLGLIFCLSVVGGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYMSLVPVVAGVMIASGGEPSFHLFGF LMCIGATAARALKTVLQGVLLSSEAEKLNSMNLLMYMAPVAVAFLLPASIIMEEDVVGITIALARDDSKILWLLLFNSSL AYFVNLTNFLVTNHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMFGYSLTVIGVILYSEAKKRSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 9 | 308 | 300 | 5.5E-182 | – | |
| PANTHER | 9 | 308 | 300 | 5.5E-182 | – | |
| Phobius | 12 | 29 | 18 | - | – | |
| Pfam | 14 | 302 | 289 | 4.8E-47 | ||
| Phobius | 30 | 40 | 11 | - | – | |
| Phobius | 41 | 66 | 26 | - | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| SUPERFAMILY | 51 | 151 | 101 | 3.14E-5 | – | |
| Phobius | 67 | 77 | 11 | - | – | |
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 78 | 99 | 22 | - | – | |
| Phobius | 100 | 104 | 5 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 105 | 125 | 21 | - | – | |
| Phobius | 126 | 131 | 6 | - | – | |
| TMHMM | 131 | 148 | 18 | - | – | |
| Phobius | 132 | 149 | 18 | - | – | |
| Phobius | 150 | 154 | 5 | - | – | |
| Phobius | 155 | 172 | 18 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| Phobius | 193 | 210 | 18 | - | – | |
| TMHMM | 193 | 210 | 18 | - | – | |
| Phobius | 211 | 229 | 19 | - | – | |
| Phobius | 230 | 251 | 22 | - | – | |
| TMHMM | 230 | 252 | 23 | - | – | |
| Phobius | 252 | 257 | 6 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 258 | 279 | 22 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| TMHMM | 283 | 302 | 20 | - | – | |
| Phobius | 285 | 302 | 18 | - | – | |
| Phobius | 303 | 309 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0135000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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