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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0138800 |
| Transcript ID | LotjaGi6g1v0138800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF2431 domain protein; TAIR: AT1G55790.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|I1N071|I1N071_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0138800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40342633..40345835) extracted from Lotus japonicus Gifu genome v1.2.
TATTGCTATAAAATATGCAGTCGAAAGGTTAAATCATTTTGAGACCCTTGTCTTGTCAAAGATGAAAATAGCAGTAGAAA TGAAGAATGAAACTGTGTGCAAGAAGCCAGAGGAAATGGAACATGGAGAAGAAGAAGAAGAACCAGAAGAGAGTATGAAA TGGGTAAAACATTACTCTAGTGATCATCAAATACTGTTGGTGGGTGATGGTGATTTTTCATTCTCCCTTTGCCTCGCCAA CGCTTTTGGTTCCGCTGCCAACATCGTTGCTACCTCTCTTGATTCCTATGGTAACTATTTTTGCATGCCTTTTAACATTG TGCTTGTTGCTTTTTTTTCCCTAAAAAATTTCAACCATATTTCTGATTCTCAACAATATGTAGTGTTTTTATTGAATTTA CAGGACATAGTGTATCAATGAACACATGCATATTGCATTTTTCTCTCTTTTATTTCCTTGATCATTTTTTTAATTTTTTC TCTATTTGTGCCCCAAATTTGAATGTGCTTGCTAGAGTGGAAATGAGAAGGTGCAATTAGTGTTACATAATTTGTTTGTT AGTTATCAAACTACAAATGCTTTGTCAATTGTTGCTCCACTAATTTCTGCCACATGCACCCTAAATTAGTTAGTGACTTA GTGTCATTATGTAATATGAATCTTGTGCTACAACATGCTTTGGTGTGTCTTTTGTAATCAGTGCCCTACCTCTCCATGTA GATGATGTTACCAGGAAGTACAAGCAAGCAAAGTCAAATTTAGATCAATTGCAGAAGCTGGGAGCATGCTTGTTACATGG AGTGGATGCAACCAAAATGAAGCTTCATTCAGACTTAAAAATGCGACGGTTTGATCAAATTATATTCAACTTCCCACATG CTGGCTTTTATGGGAAGGAGGATAACTTGCTAATGATTAAGTGAGTGTTCTTTTAGAGTTTAGTTTGATGACTAGTTACA GTCTTGATCACTTTATAAAGAACAAATTTCATTTGAAATGATAATATTTCTGCTATTCTGCTATTAGGCCAAAACATAGA GTAGATGTAAGTGACGTGAGATTAATTTAATCATTTATGAACTGAGAACATGAATGTGACATTTTATTTTGCACATTACT GGTTTGCATATTCAAGTGTGTTATCCTAAATTACAGGATGCATAAAGACCTTGTGTTTGGTTTCTTCAAGAATGCTAGTT GCATGCTCAGAGCCAATGGTGAAATTCATGTGAATCATAAAACTACAACTCCTTTTAACAACTGGAACATAGAGAAGCTT GCTATGCAAAGCTTTCTGACACTGATTGAATGCTCTGACTTCAAGAAGGAAGACTACCCGGGTTATAACAATAAGCGTGG TGATAGCAATAGATGTGATGAGCCCTTTCCACTTGGTAAGTGCAGCACATTTAAGTTCATTTACAATCCTAAAGCCAGGA GAAACTGGAACAAGATAAGTCATACGATGTTTCCCAAAGAACAAACCAGACTTCCCTTACAAGAGATTCAAGATGCTGCG GAGCAATTTCCAACTCCCATTAATCCCCATTATTATCCTCAAACATGTCACATTCCAAGAATGAATGAAGCAATGACATC AAAACTTGATTTGACATGTGGACAACCTCCAATATCTAGGGACTACTTCAACAATGTGGAAACAGTGCACAAAAGAACTC CTCCTTCTGTTGGTTATCATCCTTATGCACATGGTATCAATTTGGGCTCTCCGAGATCGTTGCAGCCGAGGAACTCATTT CAATCTTTGCAACCGTGGCCAACATCAACTAATGCTAGATATTCTCAGATAGATCATGTTGGGACAATTGATAATGTTCC TTTATCACATACTGCTAGAAATGTAGACTATCAAGTCTTTGGTGGCAGCTCAAACTATTTGCCGGAAGCACCTTGTAGAA GAGCTCAGAGGTCAAGTTACTTTGATGTTGGGACAAGGGACCCTGTTCCTTTATCACATAGTGCTAGAAATGAAGACTAC CATGTCTATGATGGCAGCTCAAACTATTTGCCAGAAGCTCCTTATAGAACAGTTAAGAGTTCTTATTTTGATATTGGAAC AAGGGACACTGTTCCTTTATCATATGGCGCTAGAAATGAAGACTACCAGGCTTTTGGTGGCTGCCCAAATTATTTGCAGG AAGTAGCATCTTGTAGAACAGCTCAGAGGTCAAGTTATTTTGACAGTGTGAGATCTGACTTTGAGAGGTACATTACTGAA CAGATTGGAAGGAGGACTTTGAATGCTGACATCTATAATGAGCCTCACTGAATGAGTGTTTTGATGTCAGAGAGAAGGAT GTTTGTTGGGTCCTGATTACACTGTGAATGGAAGTGCATAGAGGGAGGAATTGTGATACCAGTTGATACCAGGAATGGTG GCATCTATAATAAGTCTCTTCTTGAAGCTTAGTGGTTATATTGTCCAATATAGCGCTGGAGTTGTGAAGCTGGTAATTTG GTAATTAATTATCAGATGTTGATCATTTTGCAGCATGTTATTTTGTGATCAACATTTAGCATATGTTGATCATTTTGCAG CATGTTATTTTGTTCATATGTTGATCATTTTGCAGCATGCTATATTATGCTGTAAAAAAGTTATCCTTTTATTGGTAAAC CTTCTGAAAGAATTGCTCAAGTAGAACAAATTCCTACTTTTTCGTTAAATTCCAGTGCCTTATATAAATCCAAACTAGTT TGGGTTCTTATGGCTATGTGCCTATGTTATTTTTTAAATTTTCAAAGGTGCATTTGGATAAACAACTTAGCGTGTGTTTG GATTTCAGTTTACAAAATAGAGTTTGAGTTAATGTGGGTTTGTAAAACAGAGTTTGGATGAATGTGAGTTTGTTGTAATA TGATTTATGTTTGAATACTTTTATTTTAAAAGTAAGTTTGATAAATTAATTTTGTTTGGATAATATTAACCAAAAGCACT TTCATAGTGTATAATACTGTAAAAGTTCAATATCAATGTACCAACCAACTTTCATCCAAAGTAGAAGTGAGGATTGAGTG GAGTTGAGTGAAAGTGGGTTTATCACACAAAGTGAGTTAAGGTGAATGTGGGTTGGAGCCATCCAAACATAGTGACACAT TGTTCAATACAACTCAAACCCACATTGAGGTGCCCAAACTTAAAAACAAACATAACCTTAATTAAGATAAGTGTGCATTA CAT
CDS sequence (LotjaGi6g1v0138800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATAGCAGTAGAAATGAAGAATGAAACTGTGTGCAAGAAGCCAGAGGAAATGGAACATGGAGAAGAAGAAGAAGA ACCAGAAGAGAGTATGAAATGGGTAAAACATTACTCTAGTGATCATCAAATACTGTTGGTGGGTGATGGTGATTTTTCAT TCTCCCTTTGCCTCGCCAACGCTTTTGGTTCCGCTGCCAACATCGTTGCTACCTCTCTTGATTCCTATGATGATGTTACC AGGAAGTACAAGCAAGCAAAGTCAAATTTAGATCAATTGCAGAAGCTGGGAGCATGCTTGTTACATGGAGTGGATGCAAC CAAAATGAAGCTTCATTCAGACTTAAAAATGCGACGGTTTGATCAAATTATATTCAACTTCCCACATGCTGGCTTTTATG GGAAGGAGGATAACTTGCTAATGATTAAGATGCATAAAGACCTTGTGTTTGGTTTCTTCAAGAATGCTAGTTGCATGCTC AGAGCCAATGGTGAAATTCATGTGAATCATAAAACTACAACTCCTTTTAACAACTGGAACATAGAGAAGCTTGCTATGCA AAGCTTTCTGACACTGATTGAATGCTCTGACTTCAAGAAGGAAGACTACCCGGGTTATAACAATAAGCGTGGTGATAGCA ATAGATGTGATGAGCCCTTTCCACTTGGTAAGTGCAGCACATTTAAGTTCATTTACAATCCTAAAGCCAGGAGAAACTGG AACAAGATAAGTCATACGATGTTTCCCAAAGAACAAACCAGACTTCCCTTACAAGAGATTCAAGATGCTGCGGAGCAATT TCCAACTCCCATTAATCCCCATTATTATCCTCAAACATGTCACATTCCAAGAATGAATGAAGCAATGACATCAAAACTTG ATTTGACATGTGGACAACCTCCAATATCTAGGGACTACTTCAACAATGTGGAAACAGTGCACAAAAGAACTCCTCCTTCT GTTGGTTATCATCCTTATGCACATGGTATCAATTTGGGCTCTCCGAGATCGTTGCAGCCGAGGAACTCATTTCAATCTTT GCAACCGTGGCCAACATCAACTAATGCTAGATATTCTCAGATAGATCATGTTGGGACAATTGATAATGTTCCTTTATCAC ATACTGCTAGAAATGTAGACTATCAAGTCTTTGGTGGCAGCTCAAACTATTTGCCGGAAGCACCTTGTAGAAGAGCTCAG AGGTCAAGTTACTTTGATGTTGGGACAAGGGACCCTGTTCCTTTATCACATAGTGCTAGAAATGAAGACTACCATGTCTA TGATGGCAGCTCAAACTATTTGCCAGAAGCTCCTTATAGAACAGTTAAGAGTTCTTATTTTGATATTGGAACAAGGGACA CTGTTCCTTTATCATATGGCGCTAGAAATGAAGACTACCAGGCTTTTGGTGGCTGCCCAAATTATTTGCAGGAAGTAGCA TCTTGTAGAACAGCTCAGAGGTCAAGTTATTTTGACAGTGTGAGATCTGACTTTGAGAGGTACATTACTGAACAGATTGG AAGGAGGACTTTGAATGCTGACATCTATAATGAGCCTCACTGA
Protein sequence (LotjaGi6g1v0138800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIAVEMKNETVCKKPEEMEHGEEEEEPEESMKWVKHYSSDHQILLVGDGDFSFSLCLANAFGSAANIVATSLDSYDDVT RKYKQAKSNLDQLQKLGACLLHGVDATKMKLHSDLKMRRFDQIIFNFPHAGFYGKEDNLLMIKMHKDLVFGFFKNASCML RANGEIHVNHKTTTPFNNWNIEKLAMQSFLTLIECSDFKKEDYPGYNNKRGDSNRCDEPFPLGKCSTFKFIYNPKARRNW NKISHTMFPKEQTRLPLQEIQDAAEQFPTPINPHYYPQTCHIPRMNEAMTSKLDLTCGQPPISRDYFNNVETVHKRTPPS VGYHPYAHGINLGSPRSLQPRNSFQSLQPWPTSTNARYSQIDHVGTIDNVPLSHTARNVDYQVFGGSSNYLPEAPCRRAQ RSSYFDVGTRDPVPLSHSARNEDYHVYDGSSNYLPEAPYRTVKSSYFDIGTRDTVPLSYGARNEDYQAFGGCPNYLQEVA SCRTAQRSSYFDSVRSDFERYITEQIGRRTLNADIYNEPH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 12 | 31 | 20 | - | – | |
| PANTHER | 23 | 292 | 270 | 2.5E-123 | – | |
| PANTHER | 23 | 292 | 270 | 2.5E-123 | – | |
| Pfam | 45 | 210 | 166 | 2.0E-50 | ||
| Coils | 76 | 96 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0138800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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