Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR019446 is a 25S rRNA (uridine-N(3))-methyltransferase BMT5-like.
<p>This is the N-terminal domain found in proteins from plants, yeast and humans, including 25S rRNA (uridine-N(3))-methyltransferase BMT5 from S. cerevisiae and the poorly characterised Ferredoxin-fold anticodon-binding domain-containing protein 1 from human and Heavy metal-associated isoprenylated plant protein 41 from Arabidopsis. This domain has a characteristic Rossmann-like fold of S-adenosyl-L-methionine (SAM) binding domains [[cite:PUB00075659]]. BTM5 is a SAM-dependent methyltransferase that specifically methylates the N3 position of uridine in 25S rRNA.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RecName: Full=Uncharacterized protein At4g26485] gi|218551767|sp|P0C8L4.1|Y4648_ARATH | 4 | ||
| – | Os09g0479400 [Oryza sativa Japonica Group] gi|115479771|ref|NP_001063479.1| | 4 | ||
| – | Os09g0479400 [Oryza sativa Japonica Group] gi|115479771|ref|NP_001063479.1| | 6 | ||
| – | RecName: Full=Uncharacterized protein At4g26485] gi|218551767|sp|P0C8L4.1|Y4648_ARATH | 4 | ||
| – | Os09g0479300 [Oryza sativa Japonica Group] gi|115479769|ref|NP_001063478.1| | 5 | ||
| – | Os09g0479300 [Oryza sativa Japonica Group] gi|115479769|ref|NP_001063478.1| | 4 | ||
| – | DUF2431 domain protein; TAIR: AT1G55803.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|A0A0S3S6K6|A0A0S3S6K6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0138700_LC | 5 | ||
| – | DUF2431 domain protein; TAIR: AT1G55790.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|I1N071|I1N071_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0138800 | 6 | ||
| – | 30S ribosomal protein S19; TAIR: AT1G55790.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|A0A0B2RIB8|A0A0B2RIB8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0138900_LC | 4 | ||
| – | DUF2431 domain protein; TAIR: AT1G55790.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|I1L063|I1L063_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0280600 | 7 | ||
| – | Sodium/potassium-transporting ATPase subunit alpha-1; TAIR: AT1G55803.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|P0C8L4|Y4648_ARATH Uncharacterized protein At4g26485; TrEMBL-Plants: tr|A0A151T6Y5|A0A151T6Y5_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi6g1v0280700_LC | 4 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR11538:SF63 | PANTHER | 1 | 9.09 |