Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139800 |
| Transcript ID | LotjaGi6g1v0139800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcineurin B-like protein; TAIR: AT4G26570.1 calcineurin B-like 3; Swiss-Prot: sp|Q75LU8|CNBL3_ORYSJ Calcineurin B-like protein 3; TrEMBL-Plants: tr|C6TG22|C6TG22_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0139800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40661984..40668071) extracted from Lotus japonicus Gifu genome v1.2.
GTCGTCAAAGGTGTACATAGGTTGTACTCTATCTGTCATCAACGATATCACTTTCATTCATCACCCTCACCACGCACATA CAGATTCGTCCCAATCACCATTGAGTAGTTGCCTTCATTCACCATTCAAAATTAGCTCTATCTATCATTCATTCAATCTC TCTATTGTGGATTTTCATTTTTGCATCCAAGGTTTGTTTGATTGATTTTTCTCTATACCCACTTCAGCTGATTGCTTGTT AATCTTAGGAGAGACCACGGTTAATGTTTTTATCATAAATTTTGATGTGGGGTTCTTCGGATTTCTGTAAATTTCGTTTC TTTTTTGTTCTTCATCGTCTTGGTTTACTGCTGGTTCATCTAAATCGATGTTTTTCATGCATGAGTTAATGGCCTTGAAT TCAGAACCTTTTTGTTGTTGGATTATTGAATTTTGAATCTGGTATTTGTTCTGGGGGATTTTGATTGGTTTTCTGTGTGT AGCTGGGTTTGGGATCATGGATCCAAGTTTATCAGTGGCTTGGATGCAGAGAAGAGATGTAATTCTTGTGGTTTCTGCAA TTATGGACTTTTGATAATTTGGTATTTGATATGGCCAACGTAGCCTTGCCTCACCTTGTGGAACTATCAAAGCTTGATTG ATGTTGCTAATTGTTGTTGAGTTGTTGTTGTTGTTGCTGTTGTTGTGTGTATGGTTCTATGTGGAGTTCCTTTTTTGTAC TTTTGGATATCTGACAATTCTATGTAGCCAATCCACTGCAACAACATAAAACTTTGAAATATAGTTTTCACTTACCTACA AATTTATATAACCAATTTCATGTGCTTCAAAAGATGAAGGAAGAAAGGAATACACAATTTATTGTTCTTGAATGCTGACA CTTTTTGTATGATGTAATAAGTAATTGCAAATTTATGTGCAATTTCATGGTTAAAATTTGGAACTTGCCATGTCCTGTTT CCGAATTGGGTAGTTTATAATATCATAGGTGGTAGTCTGATAGATCTTTTACTTCAATTCTGAAACAATATTTTGTTCAC ACTGTTGCGGTTCAAATTTTGCAGATATTGTCAGTTGGGATTGGTCACTTGAAGTTGGAAATGGTTAAAAGGTTCGCTTT TCATGTGCAAACTTATAATGACTTTATGAGGGGTGAACTTCATGGAATGTCTGACTAATTTATTCTTTGAACAGTTATGG AGTGTTCTGATTTGCAAAAGATATCATGTTGCAGTGTTTAGAGGGACTTAAGCCTTTACTTGCTTCGCTATTGCGTTGTT GTGACATTGATATATATAACCAGCCAAGAGGCCTTGAAGATCCTGAACTTCTTGCTAGGGAGACAGTGTGTATGTATTAA CCTTAGTTTATGCTTGTGATTCATTAATTGCCACTTCTGTTCTTACAAAAGTATAGTATAAATGAATTTTGATTTTCCAA CTTGCGTCTGATAATTGAGAATATTACTTATAGAATCCTGTATCTTGTGACATTGCTTAGAGAGCATGCAGTTGTCTTGT TATTGCTTGATGCGATTACCTTTCACACTGCTCTTTGGAAATTAATAAACATACTTGTACTGATGATAGTTAACTATTTT ACACATGCCTGCAGTCAGTGTAAGTGAAATAGAAGCACTATATGAACTCTTCAAAAAGATCAGCAGTGCTGTAATTGATG ATGGGCTGATAAACAAGGTTTGTCCTTTTTGTTATTGAACAACTTGTGTTTAAGACATATTGTATAGAAAAATGCTAGCA ACACTCACTTTAGCACTCCTCGTTTGTATAGCATTAATTGAGTTTTTTAAGCTCTGATGAAAGAAAACATGTATATTATA TCATTTGCAGGAAGAGTTTCAATTGGCATTGTTCAAGACGAATAAAAAAGAAAGCTTGTTTGCTGATCGGGTACTGCATT CTTTTCTTTTTATCCTCTTTATCTTATTTTCGTTTCAACTATCATTACTTTGAAGCATGAAAATCTCTTTCTTTGATCAT ATGAATCCACACATACAAAGAAAAAATTGCTGTCCCTGTTTAATGCTAAATGACTGAAGTAGGAATGTCCTCCTTGTTTA TTTTTATTTATTGATTGTTGGCGATCTTGGAAAGAAACTTTGTTAGCATTTTGTCATCTATATCAATCTCCCTGTCTAGT CATTTCAAAATGCTCAGTCTGTTTTCCCACCTATTTTCTCTCTTCATGTTGGTCCAGGAAAAGTTGGAGATTGTGCTATT ACGTTAGTTTAAGTTGTGATTTATACATCTTGAAGATTTCTTTCTTATTACTATGAGGCTTTCTTTTCTATTGTGGTCTT GGATTAAGATCGAGATACGAGAGTGCGATTGAGGCAGGTGCTCTTGTGGGCATTTCAGGAAGAGTTGAAATTTAATATGG GTGCACGTATATGCTGTGCACTAGAGTGTCATGTTTGTTTGTGTATACTAGCTTGAATGGTTCACTAAACATGAAATTAT GAAAATCATGTTTAACTTTTTACACCGGAAGGAATATAATTTCAAAAGCCTTGTAGTCTGTGTGTGTCACGCACGCGCGT GCATGTTTGTGATGTGTAAACTAGAAAGTAAGATGACAATGTATAATATGATTATGAGCCATTTTATTTACATGCAAAAG TAATGTATTTGCACAATGCAAATTATGGTACATTGGTACTAAACCTCTGGCTTAATATACAGAGCATATTTATGCATTTT CTTTCTCAAATCTTCCCTAACTTTTCAAGCAAATGTACTTTCTACTTTCTAGACCAGTTTAAAATCGTTTCTACATTATA TTTTGCTCCGTTTTCTATAACATGTTCAAAGATTGATTTATATTACTCCTAGTTGTTATCTCATATGAGCTTCTCTCTAA TTCTATTAGGTATTTGATTTGTTCGACACAAAGCACAATGGGATACTAGGTTTTGAAGAGTTTGCTCGCGCTCTCTCTGT TTTCCACCCAAATGCCCCTATCGACGATAAGATCGAGTGTATGTTGTGTTTTTTTCCCCTTATGTTTACCATTTAAGATC AATTTTCTATACTCGAGCTTTTAAATTTTGAGACAGATGCACAATCGGAACAATTCTTTAATTTACTTATATTGCCAAAT TTATCTTGTTGCAGTTTCTTTTCAACTGTATGATCTGAAGCAGCAGGGTTTTATTGAAAGGCAGGAGGTACTTACTACTT AGACTCACAGAACCGTTCTAGTTTTTTTCTTTTTACTCCTCATTTGAGACAAACCTGTTTTTTTCTTGTTTTTATATAGG TGAAGCAAATGGTAGTTGCTACCCTGGCAGAATCTGGTATGAATCTATCAGATGATGTTATAGAAAGTATAATTGACAAG GTGCCACCCCATTCTTCTATCACATGCATTCCCAATTATTTACAAGAGTCTTTATTGTCACATATTCTCTTTTTGAAAAT TAACTTGGATAGTTTCAACTTTCAACATTACATTTTGGGTTTCTGCAGACTTTTGAGGAAGCAGATACAAAGCATGATGG CAAGATTGACAAGGAGGAATGGCGGAACCTTGTTTTGCGCCACCCGTCACTTCTGAAGAACATGACCCTTCAATATCTCA AGTAATTTTTAATTTAATTTTTTCTAATCAATTTATGTGGGTACTCTATTCAAAATGGAGAGAACCAAATAACCTTCTCC TTTATAACAGTCTTTGTTAACAGAAACTAGAAAGCAAAGTAGCAGTCCTTCAAAATGAAAAGATTTTTCTTACTCATGCC TTCAGTCTATGTTGATTAATTTACACTAATGCCAAATTCAATTTGAAGGGCTGTTACTTTCTTTCTAGTTTTGAAAATAG TGACTCAAAAATGAAAACTGAACTTTCAATTCAGAAAGGAATTAGCTTGAACCTCTTGATGCATACACACTTGCTGTTAG CATGTTTGGAAATTTTCTATAAATGATTCTGAAGTCATAATCAATTCTGGGAAAAAGTTTGTGAGTAGATTCTGGCTGCC AGAATTGTTTCTGAGGAGAAATAAGCTGATCTAACATGCTATGTGTTTAGGTTTCCCCTCACTTGGTGTGTATTATAGAA GCATTATATGAACTAGTTCCATTTTTACTTTCACTGGCCCTCTGATATTTACTTTCATGTGTTTGAACAGGGACATCACC ACAACATTCCCAAGCTTTGTATTCCATTCACAAGTAGACGATACTTGAAGGCAGGCCTATTATTCAGTTGATAATTTTAT TACCTTTGGTTTCTTTGCCTTTGGGTTGCAGAGCCACCTCTTGTGTAGCATAGCAGATAGCTTGATTTCCTTATATTGGT TATATTTTTTATTAAGATAATTGGTTTTGCGGATTCATCTGCTGTGGTTTATTTTTCTCAAGAGTCAAGACAGACACCTT TGATTTTTTTTTGTTTAAACTTCCAGACAAATTTGTGGTTCCCATTTCTTTCATGTGAGAGTCTCATATAGCATTGTAGA GTGGAAATAGTATATTTCTTTTCTTTCAAAGTTTATTTTACAATTTTTTATTGGGGTTATCTAAATGACCCATGAGAAAG TTTGGGTTAAATAATCCATCATTCAATCACATTGAAGATAAGTGAGTTGAAAATAAATTAATAAATAAAATATAGAAATT TCACATCACTTATCTTCGATGTGATTGGATGATGAGTTATTTAACTCAAACTTTCTCATGGGTCATTTAAGACAACCTCT TTTTTATTGGACTTTACACCACTTTTTTGTGGTGTAAAGTTGCACCACCCCCTTTTTGACCTGCTATTGCAGGTTTTCCC GGTTTTTAAAAAAAAACATATTTATTAATCACAAAAATTAATTTAGGGTTAATTTCTAATCCCTAAATTAAACCCTTCAC CCTAAAAACAACAAACCTAACCAAGAAAGCTTGAATCTTTAAAACGTTTTGCAGATTTTTCCGGCGAGGTTGGCCGGAGA AGATGACGGAGCACAGCAGCCCGTGGCGGCGCTATCGCCGCGGAAGAAAAGGAGTAGATGGTCTTGTTCCTCACTTCGTG TAGAGCACGATGGTGGTGGTTACGTGGCCAATGGAGGCCAGAGATATGGCCAGTTGCAAGTCGGAGGCTCGCCGACGGAG AACGGCGGAACGAAAAATTTCTTGAGGGGTTTTGTTGCGGACGGTGAGGGGAGTGCAGTGGTGGTGTTGGTTTCTCCAAA TGGTGAGTGGTTTGCCGGAGATCAGGGATTGAAGATGGCGACGACTAGGGTTTCGTGGTGGCTCCGTTGTTGCTTCGTGA ATGAGACGTGGAGGTAGTGGTGCTCGCGGCTGGAACAGGGGAAAAGGAAGGAGAAGAGTTTGTGGTGGTGGTGGCTTCCT CGTGGCGGCTGGAGGAAGAAGCCATGGTGGTTTGCCTCTTCTTCTCCTTTCAATTTCCTCTCACAATTCATTCCTTAACT TGTTGCTTCCCAACTTGTAACATAGCCCAGATCTGAAACGCAACAACATAGCAAACAAGCAATATTCAACACCGGGTTCT GTGTTGCTTTGAAATTCATACGCAAGCAAATGCAATCAGAGAACAAGGAATCGATGAATTAGCAATAAAATTAATCAATC AAGCTTAAATTATCACTTCATCTTCTTCTTTTTCATCATCATCAACAGCTTCAAAATCGCTCCAGTTCCAAAAGAACAGT TCATCATCATCAATATCAACAGATCTGAAACGATTTGGTAGTTATTCTCCACCTTCCTCAGCCGCTCATCCAAGCCACTT CTCCATCCCTCTCCTTTCTTCTACTTCGGTACCCATTTGCATCTTCATTCCTCCCTGGAAAGGTGATGACTGTGATTGGG TTTGCGGTGAGCATGAATACACATGAATGCTACAAGGAGACTGTTGGGTTTGCTCAGGTTGAGGGTGGGTTTGTGGGTTT GGCCATTTGCTGGTTTGTGGAAAGAAGATGAGGAGATAGATGAATCTGGAAGGAAAATGAAGGGGAAGGGTGGTTATCAG AAATATGAAGAACATGTTGAATCTGGGTGAATGGGGTTTCAATTCATCTAATTGAGGATTGATGTGTTTGACGATTTAAG TTAAAATC
CDS sequence (LotjaGi6g1v0139800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCAGTGTTTAGAGGGACTTAAGCCTTTACTTGCTTCGCTATTGCGTTGTTGTGACATTGATATATATAACCAGCC AAGAGGCCTTGAAGATCCTGAACTTCTTGCTAGGGAGACAGTGTTCAGTGTAAGTGAAATAGAAGCACTATATGAACTCT TCAAAAAGATCAGCAGTGCTGTAATTGATGATGGGCTGATAAACAAGGAAGAGTTTCAATTGGCATTGTTCAAGACGAAT AAAAAAGAAAGCTTGTTTGCTGATCGGGTATTTGATTTGTTCGACACAAAGCACAATGGGATACTAGGTTTTGAAGAGTT TGCTCGCGCTCTCTCTGTTTTCCACCCAAATGCCCCTATCGACGATAAGATCGAGTTTTCTTTTCAACTGTATGATCTGA AGCAGCAGGGTTTTATTGAAAGGCAGGAGGTGAAGCAAATGGTAGTTGCTACCCTGGCAGAATCTGGTATGAATCTATCA GATGATGTTATAGAAAGTATAATTGACAAGACTTTTGAGGAAGCAGATACAAAGCATGATGGCAAGATTGACAAGGAGGA ATGGCGGAACCTTGTTTTGCGCCACCCGTCACTTCTGAAGAACATGACCCTTCAATATCTCAAGGACATCACCACAACAT TCCCAAGCTTTGTATTCCATTCACAAGTAGACGATACTTGA
Protein sequence (LotjaGi6g1v0139800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQCLEGLKPLLASLLRCCDIDIYNQPRGLEDPELLARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN KKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLS DDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 226 | 226 | 1.2E-152 | – | |
| PANTHER | 1 | 226 | 226 | 1.2E-152 | – | |
| Gene3D | 32 | 226 | 195 | 5.4E-68 | – | |
| SUPERFAMILY | 33 | 218 | 186 | 2.57E-47 | ||
| Pfam | 64 | 109 | 46 | 1.5E-4 | – | |
| ProSiteProfiles | 82 | 117 | 36 | 11.808 | ||
| SMART | 86 | 114 | 29 | 1.6 | ||
| PRINTS | 90 | 111 | 22 | 1.3E-5 | – | |
| ProSiteProfiles | 119 | 154 | 36 | 10.524 | ||
| Pfam | 122 | 189 | 68 | 6.2E-9 | ||
| SMART | 123 | 151 | 29 | 11.0 | ||
| PRINTS | 137 | 155 | 19 | 1.3E-5 | – | |
| ProSiteProfiles | 163 | 198 | 36 | 11.724 | ||
| SMART | 167 | 195 | 29 | 0.53 | ||
| PRINTS | 183 | 203 | 21 | 1.3E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of LotjaGi6g1v0139800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…