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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0145600 |
| Transcript ID | LotjaGi6g1v0145600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450; TAIR: AT3G48270.1 cytochrome P450, family 71, subfamily A, polypeptide 26; Swiss-Prot: sp|O22307|C71DB_LOTJA Cytochrome P450 71D11; TrEMBL-Plants: tr|A0A072TR27|A0A072TR27_MEDTR Cytochrome P450 family 71 protein; Found in the gene: LotjaGi6g1v0145600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:41830173..41832266) extracted from Lotus japonicus Gifu genome v1.2.
AATAAAAAGAGGTGGAAATGAAGTGTTTAAAAAATAAGGTGTGTATATATCTTTACTCTTGATTTAGTCCATCCACTCTT TCATCTCAATGGCTCCTCAAATTCATGACTGGTTAGCCCTTTTCACTTTTTTCCTATCCATGATTGTTGCAATCATGATC ATAAGGAAGAATTTAAAAGAAAAACACACAACTTCAAATGTACTCCCAGGTCCATGGAAGCTACCTATCATAGGAAATAT TCCCCATCTTGTTACATCTCTGCCACATCGAAAATTAACGGACTTGGCCATAACATATGGACCCTTGATGCATCTTCAAC TTGGGGAGATCTTCACCATTGTCGTTTCCTCAGCAGAGTGTGCGATGGAGGTAATGAAAACCCATGATATTATCTTTGCT TCAAGGCCTCATCTTCTAGCCACTGATATAGCTACATATGATTCCACAGACATAGCTTTTTCACCTTATGGTGATTATTG GAGGCAGCTTCGGAAGATCTGTGCCATAGAGCTTTTAAGCACCAAGCGGGTAAGATCTCTTTGGCCAGTCAGAGAGAAAG AGATCACTACTCTTATTAAATGGATTGCTTCAAAAGAAGGATCAGAAATCAATCTGACTCAAGCAGTTCTTTCAGTTATG TATACATTCACTTCAAAAGCTGCATTTGGCAAGAAATATGAGGAACAAGAAGAGTTCATATCAGTGGTAAAACAACTTAT GAAGCTTGCAGGAGGTTTCAACTTAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTTTCTGGGATGAGGCCTA AGCTTGAGAAGTTGCACCAAATTCTAGACAGGATTTTGGATAATATCATGTATGACCATAGAGAAGCAACGTTAAGAGAT ACACAAGCTTTGGTTGATGCAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGACAGTATCACTGACTTGGATTT TAGCTTAACTTCAAATAATTTCAAGGCTATAATCATGGTAAGCATAGGTTCTATCTTCTAGAATAATTCAATCCCCTCAA ATAAACAAACTCCAATTTTTTGAATTCACATGCATGCTTTTATCCTTTCAGGATGTCTTCATTGGCGGGAGTGAGACTGC AGCAAGTACTATTAATTGGGCACTGGCTGAGATGATTAAGGATATTAGAGTATTGGAGAAAGCACAAGTTGAGGTGAGAG AGGTATTCGGTAAGAGAGGAAAAGTTGATGAAAGTGGCATTGAGGAGCTCAAATACTAGAAAGCAATCATCAAAGAGGTT CTCAGGGTACACCCTCCTCTTCCTCTTCTTGTTCCAAGGGAAAGTACACAAGCATGTGAGATTAATGGATATAATATACC TGTTAAAAGCAGGGTAATGGTCAATGTTTGGGCATTTGGAAGAGATCCAAGATATTGGACTAATCCAGATAGGTTTTACC CTGAAAGGTTTATTGATAGAAAAATTGACTACATAGGAACTAATTTTGAGTATATTCCATTTGGTGCTGGAAGGAGAATT TGTCCAGGCATGAATTATGGCATGGCAAATGTTGAGCAGATCCTTGCATTCTTATTGTATAATTTTGATTGGAGGCTACC CAATGGGATGGAAAATGAAAAGTTGGACATGGCAGAGGAATTTGGAGCTACTGTGTCAAGAAAATGTGACCTATACTTGA CTCCTACAATTTTTCCTCCTTTGCGTGCAACTTAGAAAACGCAATACCATCCAACATGCGCCCCATCAGGGGTAGAGGCA TGATTTTCACACTGGGAGATCAAAGATAAAAAAAGAGCATTTAAACGTTCATGTTTGGAATTACTTGTAGAAAATTACTG TGAAGTTAAATCAAAGTGGTTAAAAGCAGTGAAATTGCTTCTATCTACCATAATTTTGCCACACCAGAAGTTAAATCAAA CATTTACTATTACTTAAAATAAAAAATATTCACACAAGCACAACATTATGTTTGGATACGAGTCACATTTTTCAGTAAGT ATGTTAAGGGAGCGAAATGTACTCTTGTTTTGCAAAACAAATGCAAATGTAATTAAGCATGTTATGAGAGTGAAAACGTC AATGAGAAAGTAGG
CDS sequence (LotjaGi6g1v0145600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTCAAATTCATGACTGGTTAGCCCTTTTCACTTTTTTCCTATCCATGATTGTTGCAATCATGATCATAAGGAA GAATTTAAAAGAAAAACACACAACTTCAAATGTACTCCCAGGTCCATGGAAGCTACCTATCATAGGAAATATTCCCCATC TTGTTACATCTCTGCCACATCGAAAATTAACGGACTTGGCCATAACATATGGACCCTTGATGCATCTTCAACTTGGGGAG ATCTTCACCATTGTCGTTTCCTCAGCAGAGTGTGCGATGGAGGTAATGAAAACCCATGATATTATCTTTGCTTCAAGGCC TCATCTTCTAGCCACTGATATAGCTACATATGATTCCACAGACATAGCTTTTTCACCTTATGGTGATTATTGGAGGCAGC TTCGGAAGATCTGTGCCATAGAGCTTTTAAGCACCAAGCGGGTAAGATCTCTTTGGCCAGTCAGAGAGAAAGAGATCACT ACTCTTATTAAATGGATTGCTTCAAAAGAAGGATCAGAAATCAATCTGACTCAAGCAGTTCTTTCAGTTATGTATACATT CACTTCAAAAGCTGCATTTGGCAAGAAATATGAGGAACAAGAAGAGTTCATATCAGTGGTAAAACAACTTATGAAGCTTG CAGGAGGTTTCAACTTAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTTTCTGGGATGAGGCCTAAGCTTGAG AAGTTGCACCAAATTCTAGACAGGATTTTGGATAATATCATGTATGACCATAGAGAAGCAACGTTAAGAGATACACAAGC TTTGGTTGATGCAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGACAGTATCACTGACTTGGATTTTAGCTTAA CTTCAAATAATTTCAAGGCTATAATCATGGATGTCTTCATTGGCGGGAGTGAGACTGCAGCAAGTACTATTAATTGGGCA CTGGCTGAGATGATTAAGGATATTAGAGTATTGGAGAAAGCACAAGTTGAGGTGAGAGAGGTATTCGGTAAGAGAGGAAA AGTTGATGAAAGTGGCATTGAGGAGCTCAAATACTAG
Protein sequence (LotjaGi6g1v0145600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPQIHDWLALFTFFLSMIVAIMIIRKNLKEKHTTSNVLPGPWKLPIIGNIPHLVTSLPHRKLTDLAITYGPLMHLQLGE IFTIVVSSAECAMEVMKTHDIIFASRPHLLATDIATYDSTDIAFSPYGDYWRQLRKICAIELLSTKRVRSLWPVREKEIT TLIKWIASKEGSEINLTQAVLSVMYTFTSKAAFGKKYEEQEEFISVVKQLMKLAGGFNLGDLFPSAKWLQNLSGMRPKLE KLHQILDRILDNIMYDHREATLRDTQALVDAEEDLIDVLLKFEDSITDLDFSLTSNNFKAIIMDVFIGGSETAASTINWA LAEMIKDIRVLEKAQVEVREVFGKRGKVDESGIEELKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| TMHMM | 7 | 25 | 19 | - | – | |
| PANTHER | 13 | 344 | 332 | 5.8E-48 | – | |
| Phobius | 26 | 358 | 333 | - | – | |
| Gene3D | 29 | 358 | 330 | 4.5E-71 | ||
| SUPERFAMILY | 40 | 358 | 319 | 1.57E-59 | ||
| Pfam | 40 | 358 | 319 | 2.7E-44 | ||
| PRINTS | 67 | 86 | 20 | 1.4E-16 | ||
| PRINTS | 91 | 112 | 22 | 1.4E-16 | ||
| PRINTS | 183 | 201 | 19 | 1.4E-16 | ||
| PRINTS | 297 | 314 | 18 | 1.4E-16 | ||
| PRINTS | 317 | 343 | 27 | 1.4E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0145600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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