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LotjaGi6g1v0149300.1

Overview

Field Value
Gene ID LotjaGi6g1v0149300
Transcript ID LotjaGi6g1v0149300.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description WRKY family transcription factor; TAIR: AT4G26640.2 WRKY family transcription factor family protein; Swiss-Prot: sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20; TrEMBL-Plants: tr|A0A151S523|A0A151S523_CAJCA Putative WRKY transcription factor 20; Found in the gene: LotjaGi6g1v0149300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:42493914..42502150) extracted from Lotus japonicus Gifu genome v1.2.

ACCACATTTATTATTTCTTCCTAGTTTAATAGGTACTATAGTAATGACAATGATAATTAAACATACAGACATTTTTTACC CTTTGAAATAAACATTTCAGACACCCTCTACAAACACATTGGGTTTTACATTTGCTATATTGATTTCTTGCTCATTTATC TTTCTTGTCACTCCAATCCAATGTATCTTTTGGATGTCTACACTATAAAAATGCGGGAAATCATTTTAGATAGTTTTATA ATTATAATGTGAGGGAGGTGGTACTGTGGTAGCAAGTACAAACACACATTCAGAGTTCAGAGCAACAAGGGACCTCACCT CACCTCACCTCACCTCAAACTCAGAGAACGTTTAAAATGACAAGCCAATGACACAACACAGAGATCCAACGCTTCAAGTC AACTGCGTCTCACTCTCTGACACAAAGACAACCTTCAATCAACACACAGAAAACAATACATTTTTGAAATGACCCTTCTA CCCTTCCCTCTTCACCTCTCTCTTCTCCCTCACTGACTCAACCACACTCATTCTCTCTATTCCCACAATGGACGCCGGCG AAGCCCACTCCGACCTCCGGCGAAATGGTGACGATCCGACCCGACCCGACTCGCGTTCTGATTCTGCTACCGACGGAGCT GCGGCCACTGGCGGTGCTAGGTACAAGCTGATGATGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCGTCACGATTCC GCCGGGGCTTAGTCCGTCGTCGTTTCTGGAGTCCCCGGTGCTGCTCTCGAACATGAAGGTCAGTGAGCGATTTCTTCACT TTTGGGGTTTTTAGGGTTTTGATTTTGGTGCCTGTGTGAAAATACAGTTTTTATCTGTTTGATTGAAATGGGTCATTGAA TTTGTTAGCAAAATGTGTTTTTTGTTTTTATGTGTTTTTGTTCTGTTTTGGTGTATAGTTTTTCAGCTCAAATTGGTCAA ACATGGTGTTTCTACCTGACCCAAGTGAGTTGAAGTCCACCTGGTGTGAGTGGCATGTAAAAAATTTGTTCTTTTTCAGT GTGATTTTCCTGCTTGCTCAGCATCCAAACAGAGCATATCTTATTATTATGCTTTTGTTGGAATTAATATTATTTTTTGG GAATTAACAGTCACGAGATTTAATTAGTGATGAGTTGAAGATGCTGTTTGTTTCATGGAAAATTCGAAGTTTTCGTCTGA TTATGTGCTTGTTCAATCTGATGGCGAATTTTATTTTACATATTTGTTTTATCTTTTAGTATTCGAGCTGGCCCATTTTT GTGTTTGAACCTTTTTCAATTAGTGGATTTTATTATTTGAGTGGTTTGTGTTGGGACCGTTAGATTCTGATGCTTGCTCT TATTGAATTCTGTTTTGCCTGCTTTATGCTCAATACATTATTCTGTTGGAATATGACGTTCTCTTATGATCGCTCAACGT TCTCATGTTTATGTTTCAGTGTTTGTTTTTCACATAATGAATCTTCCTTTTGTGTTGGTGCTTTCCCTTTTAAAATTTTA ACGGTGCTACATGGCATACAGGACACCCTTTTCCTTCCCATTTATACTTGTGGAACAAACGAATAAATGCATTGCCAAGG ATTAGTGGATCCATTTCTTCATTCTGTATGCCATGACATGGGAATAGTATTAGGAATGCCAGAAAGATTGTGGGTCAAGA TATTTTCTTATAGCGAAAGGACATGATTGTCATGACATGATGTTTAAAGTTTAGGGTCCTCACTTGTACAGAATGTAATG CAAGGTTCATGGGGGAATGGTTTTTCTGTGTTGTGTTTATATAATTCCACACATCATAATGTTCTGGCCTATATTTTCTC CTTAGACCCCAAATCAACAACAACCGATAGTATTGCGAAAATCACAAACTTTCCTTATGCTGAACTATAATTGGGTCTTG CTGCATAGGTAGCTGATAAATCTGCTCATTTGCCTGGTTACTTAGATGATTTTGTATGTGCTTTCTTTCTGTTGTTGTTA TTGATTCATTGGTCCATTCGCTGCTGTTTGGGTTTTAGTCTTTCCAGGTATTCTAGAACTTGGTGTTATTTTGTCCATTC CTTTTCTTTTCTTTCCATTTTTTTTTCCTGAGACATTAAATTTTGTACTTTGGCTTAAATATTTAATTTTATGGTTATTC ACTTGATTCAACAATTGCTGCACTTAGAGGTTGTGGATTATATATTATGTTTTGTCATGCCTTGCAGGTGGAACCTTCAC CTACCACAGGGTCCCTTCCTAGGCTTCAACAAACGGCACATGGTTTTGTGATTTCTGCGGCATTTCCCGTAGCCACTGTA TGCTTCAATACCAATACTGTTGATAACAGAAAATTGAGCTTCTTTGATCTTAAATCACACTGTAGATCAAATATGGTAAT GAATTATTAAATGTTAAACCAAACTGATGAATATAAAGCTTTCAACTAAGATGGTCCCTTGGACTTGACTTGGAAGTATT TTCTCCTAGAATTTTATCTGATCATAACCCGTGTACTAAGTTAACGAGATAGGTTGATCAATTAAAGTATTGCAAACCTT TCACTATTTTAAAGATGTTTTCTGTATTTAGTTTTCAAGTTACAGGCTTTTTAGCTTTGTAAAACATCTCGTTCGAACTA TTTTTCTCTTTTCTTCTTCTGTAAAAAAGGTTTTAAAAATTATTTCCGAAAATAGTTTTAAATTCAGAAAACTGTGAATG GAATCAAACAAACCCTTAATGTTCTGATTAATATTGCTTTGTTGAATATGACTAGTTGTATAGTACTTACACAATGCTAT TCACTTATTTAAGGTTCCTGCAGACTTTGAAGACCATGTAAGTGATAAATCTACTCAAAATGGTCAAGTAAAAGCAGTCA AAAGTGAAATAGCAGTCCCTTCAAATGAAGTAGGTCGATCATCACCTGTTCACATGGTTAGTTCTGGGGCTAGTACTCAT GTTGAAGTCAATTCACATGAATTAAACCCAAGGGGCAACATAGCAACTGGGCCCCAAGCATCACAAATTGAGGGTGGGGC TGGTGGACTTCCAGTTGCTGCTGACAGAGCATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAACTTGTTAAAG GAAGTGAATTTCCCCGCAGTTATTACAAATGTACACATCCTAATTGTGAAGTGAAGAAACTATTTGAACGCTCTCATGAT GGGAAAATCACTGAGATAATTTACAAGGGAACCCATGATCATCCTAAACCTCCACCAAACCGCCGATACTCTACTGGAAC TATTATATCTATGCCAGAAGAGAGATATGATAAGGCTTATTTGACTAGCAGAGATGGTAATATCGACTGGATACTTCTCA TTCATTCCTTTCTATTTTTATTTAGTGTTAAGAAAATAACGTCTCTTTCATTCTCTTCTAATTATTGAATTTTTAGACAA AGGATTCAATAATTATGGCCAGGTGTCTCACACAGCTGAGCCTGACAGTACTCCAGAACTATCACCTTCAGCAACAAATG ATGATAGTGTAGAGGGTATTGGGTTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTTAAAGCGA AGGTTTGTCAATTTAGGCCAAAGTTCTGGGTTTCTTTGTGCTGCTTGTGGTTACTTGCTGATCACTTAATATTTATTGAG CAGAAAAATGGATCTCGGAAATATTGACATCACTCCTGTAGTTAAGCCTATCCGAGAGCCACGGGTCGTTGTACAGACTC TGAGTGAGGTTGATATTTTGGATGATGGTTATCGTTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCT AGGTATGTCCACACATTGATGACTATAATTGATGAAGTCCAATCTACGGTGTGCTAGTTTGGCTTTTTTCTACAAGCTTT TATCAGTAGCTTCTCAAAATAATCCTAACAATAGCTGATAAAGTAACAAGTACTTTCTTAGTTTTATAATTGAGCCAAGC AACTTCTGCATTACATAAAAGTCCTAAAGAAATAAATTACTTTTGAATGTAACCTTAAATTTACTTTTTTTAAGCTTAGA AAATGGCCCCTTAAATTTTGAAATATTCTTTGCATGTATTTTCCTTACTGTCCAGAAGGCTGAGACAACCTCGTCTCACT CACAGAAAGGGTGTGTGATAGATGGTGTATGTTTCATATGGTTTCTAGAATAGGAAAGGGAGTAGTATTCTATGATATAT TCTGATGAGTGTAGTTAGAACCACATGAATTGTGCGATCCATATCGCTATTCGGTACCAAATCAGCAGAGATCGATACAG ATCGGATTCTGACATGCATCACGCAGGGGTCGCGCACTCAGGACGGGGTGAGTTGTGCAATCCAATTATGAAAATACTGC TTTTAGGGTTACATTTCTCTTGCAATTTTTTTTATAAAATTGGAGGCAAAAGGAGAATAAGAGATTGGTGAAGAGGGTGG AGGGAGATGGTGCACCCACTGGTTGCTGATGTCATTGCATAGTGAAACCCACAGCACCTGTACAGGGAGAGGGGTGCCGA AGAAGAGAAATAGCGGGAAAACACTGCTCCGGGAAGAAAGTTTCCTGGGAAACCGCTGGTAAGGATGAAGAAAGGCGAGG TGAAGAGGAGGGGTGAGCTGCCGCTAGAGAGAGGGGTTTTTTTTAGTCAGCAGAGGGGGGGGGGGGGGTACTGCAGGGAA AAAGAGGAAAGGTAGGGTTTGGCTTTTGACACACAGAATCCCTTGTTGCTTATTATGCAATGAGTTCTTCAGTTATTTTA CTTAAAAATACTAATATTTCTATGTTTAAATGTTTATTTATGGTTAAAAGGGAACTGGATTGAATTAATAGTGTTTAAGT AGTAAGGTACTGCAGGGAAAAAGAGGAAAGGTAGGGTTTGGCTTTTGACACACAGAATCCCTTGTTGCTTATTATGCAAT GAGTTCTTCAGTTATTTTACTTAAAAATACTAATATTTCTATGTTTAAATGTTTATTTATGGTTAAAAGGGAACTGGATT GAATTAATAGTGTTTAAGTAGTAATTTGTATGTAACAGCATCTTTACTCAGAATATGCGAAAAAACACAGTCAATGGTAA GGTTCACATGAAAGTAGACTGCTAGCCAAAAATTTAAGTTTTTTTTTCAGGTTTAATGTTTTGAAACTGAAATACTGTGT CATGGCTAAGAACTTGCATTCCGTACAAGTAAGTTGCATCCTTTTCATTTTGATGATTCGCTTTTAGTATTTATTTCCAT GGCACTGACCTGAAATTATGATCACATAGAGAATTTTGGGTGTGTTACAAGTCCCCACATTGACTAGGGATATGGCCAAA CAAGTGTTTATAAAGGGTAGAACAACTCTCAACTCTTGAGCTAGCTTTTGGGTTGAGTTAGGCCTCCCAAATTCTAATAG GGTGTAAGAAACTTTCTATTTGAGTTGAAAGATGCTTGAAATGCATTTTATGTTGCTTTTGCTGCACTAAATATATCTCG AAAGTTCTTTGTCATATTTTACGTTTCTTATGCTCTAAAATAATTTAAAAATTCTGCATGTTTTAGTCTTGTTCAGAATC CTCATTAAATGGGAAGGGAAATTTCTACCTTTCCTGCAAGTTCTCTTCATTAGCACCAAATCATCTGAACTTTTAGTTTT AGGTAGGACTACTGTGTACTTGAGTTTTTCTCGCCTATAAGTTTTCCCTGGTTAACATTTCTCTACCCAAGTGTCAGGAA TTCCAGTTAGTTTTGATTAAGGATTGGTATATTTAATTTGACCCTAACTTTACAATTAAGGCCTGCTGCTGGTGTCATTT TCTGAATTTGTTGGGCACTTAGGAGGAAGTAGCTATAACATTGAGCTTTATTAATCTCAGATGCAATACTAAATACTGGT ACCACTCATTGGATGCATCTGAAACCTCAAGACCTTTCTGTTTTATGATAAGATCATTAATTTGGCTGTCATTTCTGTAA ATGCTAGAATCTGAGCATGTTGCTTCTTCTGTGTTCCTCTGTTGTGTAATTGTATTTTTGTCCTTTGGCAAGAATCATCA CATTCCATTCTTTAAGCACCTCAAAGCATAAGAAGTGAATCAAATGTGTACATAGATCCCTCCATGAGCTTGGCTGGTCT CTCTGATCCATAGTTCCATAATGTGGTGATTAGTTGCATAGTGTTGGTTAACCTTGTTTCTTATCGCGCTCACTTTATTA CACAGGAGTTATTACAAGTGCACGAATGCTGGTTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGC TGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCAATTGCAAGGAACAGTTGCCATGATCACATGGCAGGAC AAGCAACTGCACAGACAAGAATTAGGGCAGAAGAAAGTGATACTATTAGCCTTGATCTTGGTATGGGGATTAGTCAAGCT GCTGAAAATAGATCAAACAATCAAGGGAGGATGGTGCTTTCTGAATTTGGGGACAGTCAAACTCACACCAGCAATTCCAA TTTCAAGTTTGTTCATACTGCCCCTGCTTCAGTATACTTAGGTGTACTAAATAACAATAACTCACATCCATATGGTTCTA AAGAAAATCCAAGTGATAGAAACCATTCTGCTTATCCTTGCCCCCAGAACATGGGAAGAATTCTGATGGGTCCCTGAAAT TGTTTACACCAAAAATCAAACAAAAATGAAAATTACTTTCTTTTTGGCGGGTGAAGCTTCAAAGGCATAGCTCCGTTTTT GTTTGTTTGAAAAAGCTAATTGTTCTTATGTGTTCATATTATTGCTATCTGAGAGGTGCTCTTTGGTAGAAGTAGTAGTA GATGTGTCCATTCTTGTTGAGTTTTAAATCTTATTGTTGTCTGTATAATATAGAAATTCTTCTGTACAAATATGAAGCTG ATACCAAAGTTACTTGGACATAAAACCTTGTAAAAGTGTTGGAACTCGACTATTTATAAGAAGTGTTTAGCTTATTCCTA TTCTGGGTGTAATTACATTCATATTACTCACATATTCATACTAGGTAGCTGCGGTCTCACCCTTGATCACTGTTATTTAT TTATTGATATGCCATGCGCTCATGTGAGGCAGAGAGGAGGATCTCGGGGCCAAGAGGCTCACCGTGAGGGTGACTCCCCA ATTCCCAATGCGTTCTTCGTGTGCAAAACCGAAAAGGGTGCAAGGGCTCCACTAGTGAAGCCTCACGGGCCTGGATTTGG CGGTGGTGCCTGAGTATGGTGGTGGGGCCTATGCCGGTGCTGGTTTCAGAGCAAGATTGCCTCTAGCTTCTGGCGGAGGA TTCCTAGATTGCCTCTAGCTGATGCCAAGACCTCCTACTGGTGGAATGTACCAAGGCATGCACCTGCCTTATTCTAGAGG TATCTTTTTGTGTTTAATTTTCAATTTGACTTAATTGCACTGTCGGTCTCTGATCTATCACGATTATGTGATTTGACTCT TTCATGTTCACAAAAGGTTCGTCCGTCAATTTGTTATCTAATTTCAAACGGAGTTAGTCTATGAGACTTCAAAAATAATG TGGATATGTTAATTTTGCCACTAGGATGTCACTTCATTAAAAAAAGCAAAATTATTTAATTAAAAAAAAAAAAAACCAGA TTCATCCATTCCAAAATTATCATAATCATCTTCTCCAACACGCCTCCTTCAACAATGAAAAATCAATTCAAAATCATCCT AACATTAAAGAGCAAAAATTCCAGATGGTATCCAGAACAGAAATGGTTGGGGCTTTCAGAAAAAAAGTTAATCTCGTTCT CACTCACTCCATTTGTGGTTGGGGCTTAGAAAGAGGTTGTGATGTGAGCAGGACCTGAGGGATGGGTGGAGGTGGAGCAG AGAGAGGTTGAGGGAGATGGAGATTGAAAGAGAGCCTCATACATTCTCGGTTCTAGCACAAGACGTCCAAAGTCCAGGGG AAATGTAAATTTTGGTCACAATACCTAGGGGTGTTCGTGGGACGGGTTGGGATGGGTTATAAACTTTCACTCAACCCTAA ATATTGATCGGGTCATTTTTTAAACCCGAACCTGTCACTACTCACTAGTCACTAGACTTGAAGAAACCCAATGAAGTGCG GGTTTAACATAGACCGGGCCATGAAAGAACCGGTCCGGGTTGGCCAAAAGAAGGGCAAATTGATGTCAATTTTAAAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0149300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGACGCCGGCGAAGCCCACTCCGACCTCCGGCGAAATGGTGACGATCCGACCCGACCCGACTCGCGTTCTGATTCTGC TACCGACGGAGCTGCGGCCACTGGCGGTGCTAGGTACAAGCTGATGATGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGT GCGTCACGATTCCGCCGGGGCTTAGTCCGTCGTCGTTTCTGGAGTCCCCGGTGCTGCTCTCGAACATGAAGGTGGAACCT TCACCTACCACAGGGTCCCTTCCTAGGCTTCAACAAACGGCACATGGTTTTGTGATTTCTGCGGCATTTCCCGTAGCCAC TGTTCCTGCAGACTTTGAAGACCATGTAAGTGATAAATCTACTCAAAATGGTCAAGTAAAAGCAGTCAAAAGTGAAATAG CAGTCCCTTCAAATGAAGTAGGTCGATCATCACCTGTTCACATGGTTAGTTCTGGGGCTAGTACTCATGTTGAAGTCAAT TCACATGAATTAAACCCAAGGGGCAACATAGCAACTGGGCCCCAAGCATCACAAATTGAGGGTGGGGCTGGTGGACTTCC AGTTGCTGCTGACAGAGCATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAACTTGTTAAAGGAAGTGAATTTC CCCGCAGTTATTACAAATGTACACATCCTAATTGTGAAGTGAAGAAACTATTTGAACGCTCTCATGATGGGAAAATCACT GAGATAATTTACAAGGGAACCCATGATCATCCTAAACCTCCACCAAACCGCCGATACTCTACTGGAACTATTATATCTAT GCCAGAAGAGAGATATGATAAGGCTTATTTGACTAGCAGAGATGACAAAGGATTCAATAATTATGGCCAGGTGTCTCACA CAGCTGAGCCTGACAGTACTCCAGAACTATCACCTTCAGCAACAAATGATGATAGTGTAGAGGGTATTGGGTTTTTGTCA AACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTTAAAGCGAAGAAAAATGGATCTCGGAAATATTGACATCAC TCCTGTAGTTAAGCCTATCCGAGAGCCACGGGTCGTTGTACAGACTCTGAGTGAGGTTGATATTTTGGATGATGGTTATC GTTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAGTGCACGAATGCTGGTTGC CCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACCACATATGAGGGTAAGCACAATCATGA TGTACCAATTGCAAGGAACAGTTGCCATGATCACATGGCAGGACAAGCAACTGCACAGACAAGAATTAGGGCAGAAGAAA GTGATACTATTAGCCTTGATCTTGGTATGGGGATTAGTCAAGCTGCTGAAAATAGATCAAACAATCAAGGGAGGATGGTG CTTTCTGAATTTGGGGACAGTCAAACTCACACCAGCAATTCCAATTTCAAGTTTGTTCATACTGCCCCTGCTTCAGTATA CTTAGGTGTACTAAATAACAATAACTCACATCCATATGGTTCTAAAGAAAATCCAAGTGATAGAAACCATTCTGCTTATC CTTGCCCCCAGAACATGGGAAGAATTCTGATGGGTCCCTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0149300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDAGEAHSDLRRNGDDPTRPDSRSDSATDGAAATGGARYKLMMPAKLPISRSPCVTIPPGLSPSSFLESPVLLSNMKVEP SPTTGSLPRLQQTAHGFVISAAFPVATVPADFEDHVSDKSTQNGQVKAVKSEIAVPSNEVGRSSPVHMVSSGASTHVEVN SHELNPRGNIATGPQASQIEGGAGGLPVAADRASDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGKIT EIIYKGTHDHPKPPPNRRYSTGTIISMPEERYDKAYLTSRDDKGFNNYGQVSHTAEPDSTPELSPSATNDDSVEGIGFLS NRNNDEVDDDDPFLKRRKMDLGNIDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGC PVRKHVERASHDPKAVITTYEGKHNHDVPIARNSCHDHMAGQATAQTRIRAEESDTISLDLGMGISQAAENRSNNQGRMV LSEFGDSQTHTSNSNFKFVHTAPASVYLGVLNNNNSHPYGSKENPSDRNHSAYPCPQNMGRILMGP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 23 23 - –
MobiDBLite
mobidb-lite
1 38 38 - –
PANTHER
PTHR31221
25 96 72 2.0E-251 –
PANTHER
PTHR31221:SF156
25 96 72 2.0E-251 –
PANTHER
PTHR31221:SF156
108 535 428 2.0E-251 –
PANTHER
PTHR31221
108 535 428 2.0E-251 –
Gene3D
G3DSA:2.20.25.80
186 254 69 1.3E-27
IPR036576
ProSiteProfiles
PS50811
189 253 65 23.938
IPR003657
SUPERFAMILY
SSF118290
193 253 61 9.68E-25
IPR036576
SMART
SM00774
194 252 59 3.4E-34
IPR003657
Pfam
PF03106
195 251 57 1.1E-24
IPR003657
MobiDBLite
mobidb-lite
279 329 51 - –
MobiDBLite
mobidb-lite
283 319 37 - –
Gene3D
G3DSA:2.20.25.80
355 430 76 3.6E-35
IPR036576
SUPERFAMILY
SSF118290
361 429 69 2.35E-29
IPR036576
ProSiteProfiles
PS50811
364 429 66 38.825
IPR003657
SMART
SM00774
369 428 60 3.1E-39
IPR003657
Pfam
PF03106
370 427 58 7.4E-26
IPR003657
MobiDBLite
mobidb-lite
516 533 18 - –
MobiDBLite
mobidb-lite
516 546 31 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003700
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates
GO:0043565
Molecular function Sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0149300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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