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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0159000 |
| Transcript ID | LotjaGi6g1v0159000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT1G51538.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9LNG5|PPP7L_ARATH Serine/threonine-protein phosphatase 7 long form homolog; TrEMBL-Plants: tr|I1N0S4|I1N0S4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0159000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43986896..43990898) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAATTCATGGTGCAAAATGAGGAGGAGGAGGCTGTGCCTAAGCATCTCCGGTGCAACCGCAGCAACGGCCGGAAATG GCGCTGCCGGCGGAGAGTGATGGCGAACAAGAAGATGTGCGAGATTCACCACCTGCAACGGCGTCATCACAATAACAAGC GCAAGAAGGACTATGAGTACGACGTGGTCGCTGTGCCTGTTTGCAAAATGGCGAGAAAGATGAAGATTAAGCACGTTGCT GTTTGCAGAATGGTGAACAAGATCAACAAGAACCTGAAGCTCTCTTAGGATCAAAATAATCTCAATGACATGGTATGTCA AAGTTCTATATTTTTTTTTTTTGAAAAGAAGTTCTATATTTTAATGCTTACATGACTAGTCATTGTTGCTTCTGATAATT ACTGTTTCTGTTTTTATCAGTTGTTTTTTTCTGTTTTTACTTGACTATGGCTCTTTTTGAGTTAGTTATTTGTTCTCAGA TTACATTCTTTCATCTATTTTTGAAAAAAAAAATAGATTCTGGTTTATGGTATGGGATTTTGGTTTGAAGGGTTTATCAG TTTTGTTTGATTTTGGGTGGGAAGAAAGAACAAGATTAAGAAATTGAAAACTGGAGTGAGATTACTGTGTTCGGTTCTGG TAATGAGTTTTGAAGAATATGAAGATGAACAACACTCTAGTGATTGAAGCATGTAATTTAGAATAAATTTGGGGTCTTTA CACAATTAATAAAATAATAAGGATATATTAGAACAAGAGTAAATTCATCTCAGGTGTCTTAATATTATTAGTACATGTCA CTCCTATACCTACACTCATTTGTAATTGTGGGTACCAGAGCATGCACCGGATTAATGTGGGATGTAGAATAAATGAATTG GAAGCAAGTGGTCGGGTTAGTATACGCGTAGTTAGGCGTTCAAACCTCAACTCATGTGAATGAAAAAGCTTTATTGGCCA TCCTCTATTACTTAGTCCGCTGCCGGCATGATAATAAATTAGTCTCACGACTATGTTGTGGAATATCTAGATCAATAGTA AAAATATTAAGTGAAATGACCCGTTTGGTAGAGCTTACTTCATATAACATAAACGCTTATACAAGTGTATATGAGATGTT ATGTAAATAGTTTATGATTTACCTATAAGCTGTTTTGAGCTTATTTTTATAAGTTGTTTAGAATAACATATGAAAAAGAG CTTATACTTATTTATCACATATTTTCAACTTATTCCAGTAAATTTCTTAAATTAGTTTATGAGTAAGCACTACACAATAA GCACTTAACTAAACTATTTTTCTAAAAGCACCAATATCAATTAAACATAGCAGTGAGGACTTTACCTCTTGTAGCTTTTT TCCTTTTAAAAAAACCTCTGGTAGCCTTGTTCTTTGGAATTGAAACTAAAATGCTTCTGCTAGTTAAATAGTTTGAAGAT TTTTTAGTTAGAGGTTAGTTCTATGGAGTGAGGCTATCTGCATTTCTTTTCTTTATATGTATTGATGCCCCATTTTAGTT ACTTATTAATTTAATTGCTTCATCCTTTTTGTTAACTAATTGTTTCAGTTGTAGTAACTTAATTGCTTCAAATTAATTAC ACCATCATTATCAACTCACACAGTTCCTTTTTGTTTGCATTTTCATGTAGCCACTGTTCATCCAAGCTGAAATTGAAGAA GCTCTTCACTTGCATCAACTCATTCATTTTTCTTGCACTCCAGAATCAGAAGAGGAATCAGAGGAGGAAATTATTGATGT TCGACAAGAGTTGATGATTTCACAGCCATATTCAGCTCAAAACCCAACTACTAGAATTGCTTATTTTCTGAAACCTTGTG CCATCCAAGAGTCACTTTGTGATTTTTCACTTCCTTTTACATCTAACCATGCAGAGGCAATTCAGGAAGTAAGATACAAT GGTTGGCAAAAGCCACCAGAGGAGTGGAAAACATGGGTCCAAAAGATGCAACTCAAGTATGAACATTTGTGGGTAAAAGC TGGAATAGACAATGCAATCCAAGCTTCTACATATGAGTTCAACAGGAATGATGAGTTGATTCATGCTCTTACTCAGCGAT GGTGTTCCAAGACCAAAACGTTCATCTTCCCTTGGGGAGAAGCAACCATCACATTGGAAGATTTGAAGGTTTGTTGGGGT TATTCTGTTATAGGAGCTCCTGTTTCTAGCCCTCTCGAGACGAATGAGCATAAGGAAATAGAAGCAAAATTAATTGAGGT AAGAAGAATGTTTAATAACTCTACAGCCAAAATGATGCTTCATAAGCCATGGATGCTGCATTTTATGAAGAATGAAAGCA GTGTGGAACACGAGGCCTTTCTGGTCTGTTGGTTGTCGAGGTTTGTATTTCCTGCAAATCCATTTGAAACCATTTTGAAG AGCGTCTTTTCTATTGCCATACATTTAGCTCAAGGGACCCGAGTAGCTCTTGCACCTGCTGTTTTAGCGAGCATTTATAG GGATTTGAGTTTGCTGAGCAACAGTGTGAGAAGTTCTGCAACAATGAATTTGAGTGTCACACTATGGGCTCCTTTTCAGC TGGTTCAAGTATGGGCTTTGGAGAGATTTCCAGCACTGCTGCCAATTCCATGTGCAAGTTCATCTGGGCAAGGCCAACCC ATAATGGCTAAATGGCACAATGTGGAAATGCTGAAAAATAACAACTTGAATTTGATTTTGGATGCTGCTGGGAATACAAA TGGTGTTCTGTGGCGCCCATACCAAAATTCTCCACCCTTGTACCTTTACAATGAAAAGGATATGTGGATGTGTCAAAACC CCTGTTTTGATTATGAGTTGCAATCCTTTGGTCGAAGTTTGAGGGTCTCTGAGCTAGTTGGTATGGGGTGTGTGGAGCAA TACCACCCACATAGGGTTGGTATGCAATTCAAGATGGATCAGGATATCCCTGGTGTGGTTTCTCCTTGTAACAAGGATCC TTGGATGAGTTATAGCCAACCAATAATGAATATTAATTTGTGCACTGCATTATGTTCCTCCCAGCCAAAGGTTACTTCTA GGTATAACTGGTGGAAGCAATTGAATTCAGGCAAGGAAGGAGATGCAATGAAAGGCTATGATCGTTGTCTGATAAGCAAA AACAGCTCACAACATATGTCACCAGCTTTAACTAGGGAGGTAAAATGTGAATTATCTTTTGGCCCACTTCCTGATTTTAC TTGCAAGTTTGGAACATGTCAAGTAGGGAATTCTGGGGATAATGCTGATGAATCAAAGATCACTGACAGATTTTATGTTA GAAATAGTGTTAATGATATGGAAGGAGAAGGTGTCAGTTCTTGTACAGTAGGTGAAGCATTTAATCTTAAAAACCGGATT TGTATGCTGGAAAGGTTGATTGCTAAGCTTAAAGCAGCCAAATTCGGGTCTAAGGTTGAAACTATTGTAGCCATAGCCAA TCCATAGTACTTACTGGTTTTAACAATGGAGCAAGAATTGCTCTATTCTTAGAGATCTGGTGCTGCTCTCGGGTCTGTTT TCTTTCTCTGCTACTGCAATATCTGGGTTGCTGAGGCAAGTTGCAAGGCTATGAGCTGGTTCGAATTGGTGATTGGAGCT CCATTGGTCTTGAAGGCTGTTGCTATGGAGTGGTGCTGTTTTGACAAGGTCTGCTGAATTGGAATTTGCTGCGTTTTGCT TGCTGGAGTGCAATTCCTATTTTGTAGCTGCTGCAATTGCTTGCTGTATGCGCATAGAGGTGGGATCACATTCAGTGTTA GGTAGTTGCTGCTGTTTGATTTTAATGTAGTTTGTTGGTGTTGGCTTTTCGCCTCATCTGCCTTGTATTTTTTATGTTCC TTTGGTTGTTTTATGAGATGCACACAACATAATGTTTATCCAATTATCAACTCTTTAGTGCATGAACAATTATGTACTAT ATACTTCTGTCAAATGTTGCTGTTATAGATAGTAGTATTTATATTGGTATCTGAACAAGAACAGAGGGAATAGTTTGGGA AGG
CDS sequence (LotjaGi6g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACTGTTCATCCAAGCTGAAATTGAAGAAGCTCTTCACTTGCATCAACTCATTCATTTTTCTTGCACTCCAGAATC AGAAGAGGAATCAGAGGAGGAAATTATTGATGTTCGACAAGAGTTGATGATTTCACAGCCATATTCAGCTCAAAACCCAA CTACTAGAATTGCTTATTTTCTGAAACCTTGTGCCATCCAAGAGTCACTTTGTGATTTTTCACTTCCTTTTACATCTAAC CATGCAGAGGCAATTCAGGAAGTAAGATACAATGGTTGGCAAAAGCCACCAGAGGAGTGGAAAACATGGGTCCAAAAGAT GCAACTCAAGTATGAACATTTGTGGGTAAAAGCTGGAATAGACAATGCAATCCAAGCTTCTACATATGAGTTCAACAGGA ATGATGAGTTGATTCATGCTCTTACTCAGCGATGGTGTTCCAAGACCAAAACGTTCATCTTCCCTTGGGGAGAAGCAACC ATCACATTGGAAGATTTGAAGGTTTGTTGGGGTTATTCTGTTATAGGAGCTCCTGTTTCTAGCCCTCTCGAGACGAATGA GCATAAGGAAATAGAAGCAAAATTAATTGAGGTAAGAAGAATGTTTAATAACTCTACAGCCAAAATGATGCTTCATAAGC CATGGATGCTGCATTTTATGAAGAATGAAAGCAGTGTGGAACACGAGGCCTTTCTGGTCTGTTGGTTGTCGAGGTTTGTA TTTCCTGCAAATCCATTTGAAACCATTTTGAAGAGCGTCTTTTCTATTGCCATACATTTAGCTCAAGGGACCCGAGTAGC TCTTGCACCTGCTGTTTTAGCGAGCATTTATAGGGATTTGAGTTTGCTGAGCAACAGTGTGAGAAGTTCTGCAACAATGA ATTTGAGTGTCACACTATGGGCTCCTTTTCAGCTGGTTCAAGTATGGGCTTTGGAGAGATTTCCAGCACTGCTGCCAATT CCATGTGCAAGTTCATCTGGGCAAGGCCAACCCATAATGGCTAAATGGCACAATGTGGAAATGCTGAAAAATAACAACTT GAATTTGATTTTGGATGCTGCTGGGAATACAAATGGTGTTCTGTGGCGCCCATACCAAAATTCTCCACCCTTGTACCTTT ACAATGAAAAGGATATGTGGATGTGTCAAAACCCCTGTTTTGATTATGAGTTGCAATCCTTTGGTCGAAGTTTGAGGGTC TCTGAGCTAGTTGGTATGGGGTGTGTGGAGCAATACCACCCACATAGGGTTGGTATGCAATTCAAGATGGATCAGGATAT CCCTGGTGTGGTTTCTCCTTGTAACAAGGATCCTTGGATGAGTTATAGCCAACCAATAATGAATATTAATTTGTGCACTG CATTATGTTCCTCCCAGCCAAAGGTTACTTCTAGGTATAACTGGTGGAAGCAATTGAATTCAGGCAAGGAAGGAGATGCA ATGAAAGGCTATGATCGTTGTCTGATAAGCAAAAACAGCTCACAACATATGTCACCAGCTTTAACTAGGGAGGTAAAATG TGAATTATCTTTTGGCCCACTTCCTGATTTTACTTGCAAGTTTGGAACATGTCAAGTAGGGAATTCTGGGGATAATGCTG ATGAATCAAAGATCACTGACAGATTTTATGTTAGAAATAGTGTTAATGATATGGAAGGAGAAGGTGTCAGTTCTTGTACA GTAGGTGAAGCATTTAATCTTAAAAACCGGATTTGTATGCTGGAAAGGTTGATTGCTAAGCTTAAAGCAGCCAAATTCGG GTCTAAGGTTGAAACTATTGTAGCCATAGCCAATCCATAG
Protein sequence (LotjaGi6g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLFIQAEIEEALHLHQLIHFSCTPESEEESEEEIIDVRQELMISQPYSAQNPTTRIAYFLKPCAIQESLCDFSLPFTSN HAEAIQEVRYNGWQKPPEEWKTWVQKMQLKYEHLWVKAGIDNAIQASTYEFNRNDELIHALTQRWCSKTKTFIFPWGEAT ITLEDLKVCWGYSVIGAPVSSPLETNEHKEIEAKLIEVRRMFNNSTAKMMLHKPWMLHFMKNESSVEHEAFLVCWLSRFV FPANPFETILKSVFSIAIHLAQGTRVALAPAVLASIYRDLSLLSNSVRSSATMNLSVTLWAPFQLVQVWALERFPALLPI PCASSSGQGQPIMAKWHNVEMLKNNNLNLILDAAGNTNGVLWRPYQNSPPLYLYNEKDMWMCQNPCFDYELQSFGRSLRV SELVGMGCVEQYHPHRVGMQFKMDQDIPGVVSPCNKDPWMSYSQPIMNINLCTALCSSQPKVTSRYNWWKQLNSGKEGDA MKGYDRCLISKNSSQHMSPALTREVKCELSFGPLPDFTCKFGTCQVGNSGDNADESKITDRFYVRNSVNDMEGEGVSSCT VGEAFNLKNRICMLERLIAKLKAAKFGSKVETIVAIANP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 43 | 503 | 461 | 5.4E-129 | – | |
| PANTHER | 43 | 503 | 461 | 5.4E-129 | – | |
| Pfam | 119 | 470 | 352 | 2.0E-105 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0159000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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