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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0162900 |
| Transcript ID | LotjaGi6g1v0162900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Smad/FHA domain protein; TAIR: AT3G20550.1 SMAD/FHA domain-containing protein; Swiss-Prot: sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL; TrEMBL-Plants: tr|V7BKB1|V7BKB1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0162900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44656125..44662977) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTTTACATCGTATTAAGAATGATAGCATCGACCCTAATAGGGCCATGGCAGAAGGAGAGTAAAATAAAAATAATTC ACTAGAAAGAAAGAAAATAGTTGGAAATGTTGATAAACCCTAAACCTGACCAGGCTAACCCATCTTCCATTGATTATGCA ATTGAGCATTCACAACTACATAGAGAGAATTACAAACAACACGAACACGTGATGTAATAGTGTTACTTACTTCTGGAACT CTCAATTCTCTACGGGCAGGACCACCATTTTCTACCATGGGTCGTCACTCATCGACCAACCACTCTCCCTCCTCCCGCCG TCACCGGAGCCACCGCAGCATCTCCCCGCCGCCGCAAGAGAAGCATCGGCATTCGAGTCGCGGGGCGGAGGCGGACCGTC CGGGTTCTGGTTCGCCGGATCCTCCTCCTCGCTCCCCCTCTCCACGAACGAAGCGCTTGAAGAGAGCTCAACAACCTGAA CGTGAGCGCGAGAGGAGCAGAGGGAGGGGTTCGGAGAGGGAAGGTGTTGAGAGGAAGAGGGTGGAGAACGACGAGGAGGG GGACGGCGAGAGGAGCAGAGGGAGGGATTCAGAGAGGAAGAGGACGGAGAACGATGATGAGGGTGACGGTGAGAGGAGCA GAGGGAGGGGTTCGGAGAGGGAGGCTGTTGAGAGGAGGGAGAGGAAGAGGACGGAGAATGATGAGGAGGGTAATGGCGGA GGAAGGAACAGCAGGTCGTCAAGGTCGAGGCACGAGAGGTCATCGCCGGAGCGCCACCACAACGGAAGGAGCAGGCACAG GTCTCAGTCGCCGCAGCGTCACGACTACGCCGGGAACACAAAGCCTCGTGATGAGGTGTCCGGTGATATCCAACCCTAGT CCAAACTATTGCTCCAACTTTGAATTTTTTGTTAAATTTTGCTTGTTTATGTTTGATGTTGTTGCTGGAATTGAAGAAAT GGGGTGTGGTTTTTTAAGATATAATGTTATGCTGCTCTCCTTGGATCCTGTTTGAGCGTTTTGGTAGTGAGTTGGTTTGA AATTTAGGTATTGCTAGATGTTGATTGAATATATGGAATATAGAGTTTTGGAGGTAATTTAGGAAACTGTAAAGCTTCTT CAGATTATGAGTAGATCTCAGACTCTTTTCACAAACAAAGTGTTAATGTGATTGGAGGATTTAGTTTTGTTTGGAGGGAA TAGTCTGATGAATGATTTCCTGATGGTGGTTTCAAATCAAATGTTTAATGTGACAACAGAAATGCAATAAAAATTAGGTG ATTGTTATTGAAAGGGAACTATGGAAATTGTGATTGTGAGAGGTCTGCTCCCATTAACTTGTGCATTGACGGTTATTAGA AGCCACTTTGGATTTGGAGTGCATTCTTTTGTGTTTACATCACGAAATTGTGATAGGTAGAGTTGACAGATAATATCCTG GTACTTTTCATTTGATATTCCTTATTTTACTTTTGTAGACGACCATTGCCTGATTCAAGAGTTGCCTTTTTCTTTTTGAG TGCATGTTGATTTGATCTCGCTTACTGTTGTCATAATGTTACTAGACAGACCTATTAGGGAGTGGTGGTGTCATCACAAG ACATTTTCTTCAGTATTGTAGTATTGAAAATTAAGTAAGGTTTAAGGTGAGGATCTGGTACCTTGGGACTTATGGAGGCT ATAAAATGAAGCTTCTAGTACTTAATTTGTAATTTTAGTTAATAGGTTATTGTTGAGTATAAACATGATGGGTAAGTGAT TTACTTTTTGTAATGAAGAAAAATGATGATAAGGACAACAGGTCATCAGGGAAGCCATCATTTAACAAAGTCTATTCATT AACCAGTGATGAACTGATTAAAAGCATGGCGTCTGGGAACATGAGTGCATACTAGTGATTGTTTTCAAAAGATCAAATAT TTAGTTATTTATTTTTGCATCATCTTTTTCGTGTTTTCATCCTTAATTTTCAAAGATTGAGGGAAAAGGGAAATTATGAT TATTGTACTTCATTCCTCGCCTTCATGGTTTTCTTTCTTTTTTAGTCTTCTATGTCTTGGGTGTGCCAGGGCGGGTTGGG GGGAGTCAAGTCAAGTAAACTTATTAGAGATAGCCATCAAGCTTAAATGGGTTACAGTTTTGATAAGCTGTTTTTTAACG TCTTTGACTGCTGAATTTGGTATGGAAGATTCACGTTGGAGCACCTATGCCTAATTTTTCTTCAGTTTTAAAAGTTGTGT TCGATTTTAAAGGAAAATTTTACCACTCGATTGTAAGACCTGCGATGTTGTATAATACTGAATGATGGGCAATTAAGAGT CAACAAGAAATTAAACTCAATGTTGTAGGGACGAGAATATTATGATGATGGATGTGTTGACACACAAGGCATACTAAGTT AAGAACAAATGCATTAAGAAAGAAAGTTGGGATAGCATCTATTGTTGTAAAAATGGTAGAACCTCACCTTAGGCAGTTTG GGCATGTCTGGAGAAGATATTTAGAAACCCCCAGTTGGAGGGTAGTCCCTTAGTTAGAGGTAGGGAGAGGCATAGAAAAA CTTTGTCAAACATTAAGAAGGATTTAGATTTAAATTGTTTGTGTCATCACTCATCACACGAGTTATAATAGGAAATTATG GCTGGTTTGATCCATGTGGTTGACCCCATGGAAAAAGTCTATGATGCTGTTGACTTTTTCTTTAAGAACAAGTTGATTTT GTCCTGTCTCCACTCTCCCCTCTTGGTTCCCACAATTTTGCTTTATTTATTTTCCCTTCGTGCATTTAATTTCCATTTCC CCTTATTTCCTCACATTACTGTGGTCTCTGTATTCCTGTTTTGTACTTCTTTACATGTTAAAGTTTCACATTTCCCTGGA ATTGATTCTGATCTAGATTTCTGTTTAATTTGTGCAGCATACAAACTCAAGAGGTGCTGAACAGATGTAAGCTGCTGTTT CAACTTTGAATTGCATATTCACGTGTTTGCATTGCTGCTTGTTCATATTGACATACTGTTTAATTTTCAGTTTTTGTTTG ATTTAGACCTTTGACAACAGTGCTATATTTGAAGTAATTTTGTCCTTCAACCTGCTGCAAATTTTTTTTGTTCATTTTTG TTTTGTTGTATTTTCCTGAATTGCGTCTAAGAAAAGGTTTCTTTGTTGTTGAGAGTCTTTTGACAATACAAACTTTGATG AAAGCATATCTTCTATTTATTGCTTTGGTGATTGGAATGGAGCAAATGTACTAATGTTATGTATAGAATTTCTGAATTTA GGGCAATTGACCTTTGGATTCAGAAAATACATTTATTGAAAATGTTTGTTTTTTATGGAGCCCAATTGTGTTGACTGATC CTTATAGGTGACTCCATCTAGTAGGATAAGACCTATTTCTGTCTGTTAGTGGTAATATTTGGCTTGAGAGAAGAAAACTC TAGGTGAATACTTGAATTTGTAAAGAGCTCGTCTGGTGTGTATAAAATGATTTATCTGAGAATGGATTTTAGATGAGTAT GGGGATTTGTAATGAGATGATCACATTTACATTATTTAATTTATTAAATTGCCTACTAGCTTAGTAATCTAGTATATGTG CTTCTGTGAAACAAATATTTTGGTGAGAGTCTATGGAGATTAAATGATTCATGTACACTAAATGGCTAAGATGGAAATGA AGAAGGCTGTTGGAAAGTAAGGGCCAATGTGGTGATCATCTAATTGTGGTGTATCGATCAGAATGTTGGCATGCTGAGAG ATAAACTGTCCAGAAAGAACACCTTCTTAAATGATTTTTTTTAAGTAATGACCCAAGACATAGTGAAGACAGAAGCTTGA TGAATTAGGAAGCTGCCATCAAAGATCAAATGATACTGATTGATCCATTTAAATGCTTATGATTTGTAAATGTAATTATA GAGATAGAGATGTAAATCTCAACATGGGAAGAGTGAGTTAGATTAATCAACGAGGATAGGAGTTGAACTAGTTATGGCAC TAACTAAGATTATGAAATGGTTAGTTGGCTTTTGCTATAAGCAGGATTGAAAGGTAAGTTGAAGATTTAGAATTAGTGGG TATAGCTTCTGATAACAGTATAACTGGTCACTTGGTTTCAGACTTCTGCTCCTTTCTTATATTCCCTGCTCCTTTTTCTA TATTAAGTTTGAAAGTTTGTATCCTACGTTTCTGTATGGATTAGAATTAGTTGGTGTAGCTTCTGATGACAGTTTGATTG GGGCTTTGGCAGGAATGACGATGATTCTATCATGAAGATGAAGGCTGCTGAGGAGGCTCTGGAAGAAAAACAGAAGGTAA CAATACGCTTCTTTTAAGATATAGTACCTGCAGTATAATGTAGTCCGCCATATGTCATTTTATGTTGGGATCAGTGTCAG ATAAGTTTAAAGCTACTATTATTATTTTTTTATAATGAGGATGTACTCATAAATTTTCTGAGTGATTTAGTTATGTTGGC ATTTCTGAAATCCTCTGCCATTTGCAGCAAAAACCTTCATTTGAGCTATCAGGAAATCTTGCCGCTGAAACAAACCGATT CAGAGGTATAACTTCATTTTTTAACATGTAGAACTTTCTATTTGATTTATAAGTGAGTTTCTCTTTCAGTTTTAATTCAA TGATAAGCAGTATTTCCTTTTCAGGTGTTACTTTGTTGTTCAATGAACCGCCAGAGGCTCGAAAACCTGATGTTAAATGG AGGCTTTATGTTTTCAGGGGTGGTGAAGTGCTGAATGGTAAAAATAGAGCTCATTTGTATATTCGAAATCAATTATCAGA ATTTACATCCAGACCACTCCATTCATCTTCTCTCTCTCTATATATATACTCTCTCATCCTCGCCTTTTCTCTCACTTTGC CCTAGTCAGTTTCTTACAAGGGGGATGTACTTAACCTACTGCTTAAGCACATTTAATATGTGCAGAAATTAATATCTGCA TTTTACAAGATTCACTAGTATAGACTTGTTAAACCTAGGCCATTTTTTCCTGTGTTACCTAAGCAGAATTTTGCTTTACT GGTAAGAATAAACTTTACTTGCTCAGAGCTTGACTATTTGATATTTGGTTTTACTCTTTCGTATCATGTTGACTAGAAAT TTTTTCATTGTTGTTAATTAGATGAGTTTGTAATACCTTAGCCATTTCGCTGAGCTTATATAATTACATGAGCCATCTGC CTCGCCCCCTCGACCTCCACATTTAGTTGTATTTCTGTTTGATGTTATGCTTTCACGTATACTCAGTTCCTTTTCCTTTC TTTTCTCGTATGTATATTTCCAATAGTCAATTTTAATGATTTAATGCTTTATTTAGATTAAAAATCTTCAAAAACGTTAA TGTAAATGGAATTACAAGTTTTGTGACTTCCAAAGAAATTTCGTATTTCTTTCTTTCTTACTGCTTTTGCTAAAAGAAGT GTATATGGTTGACAGAGCCCCTTTACATTCATCGCCAAAGTTGTTATCTTTTTGGAAGGGAGAGAAGGGTTGCTGATATC CCAACAGATCATCCATCTTGCAGCAAGCAACATGCTGTTATTCAATTCCGGTATTTTCATTGATTTAAAGCAACCCCGAG GGGGTTCCTTTTCTTATTGATGTTTTAAGTTGACACTTGTTGAGTTTCTGAATTTTTAAAATACCTTTTCTTGTTAGGCA AGTTGAAACGGAGCAACCTGATGGTATGTTATCAAAGCAAGTAAGGTAATGCCTGATTCTTTCTTTTGTTAACTTCACAC ATATACAGCCAAAAGTTTCTGTATGTGCAAACCCTAATATCTGTGTGACCTGTGCCAGGCCCTACATAATGGACCTCGGA AGCACAAACAAAACTTTCCTTAATGTGAGTAGTCATTGATTCCGAGTTTCTTCATTTTTTCTGGTAGTAATGAAAGAGCT GTAGTTAGACATGCACTGAATCCATCTATGATCTATCTGATGCTTTCTGTTGCAGGAGAGTCCCATTGAACCTCAACGTT ATTATGAACTGAGGGAAAAGGACACCATTAAATTTGGTAATAGTAGGTAAGTGACAAAAACATATTCGTTGTTTTTCATG ACATTTGAATTTGCGACGTATCGATTTCTTAGATTGTGCCATGCAGGAATATATTTTATTACTTACTACTTTGTTTTATA CAAATAAAACAAATGGTTAAGGCAGTGTTTAGATATTCGTTGGCACCAGTGTAAACGAACATTGATACTCATTTCGAGAT AAAAAGTGAACATAGTAACTACTTTTATTGATTGAGATCAAAGTCTGGACACTTTGCACTCAACTAACATCCAAACATAA ACTAATCTGTTTGCTTTCTAATTGCAGCCGAGAATATGTATTACTACATGAGAACTCTGCTGGATAATGAGCATTAACCT CTCCAAATCCACCCCTCATCAGAAGCGATTGATACATGTACCAGCAGTTTTTCTAATTATGTCCAACTTTTGTGTATTCC ATCTTTTCAGAAGATTATAGGTTAGTTTGTCTCAGTTTCTTGATATCCATACAAGACACTAAGTGGATATTTATTTTATG TTGTAAAGTACTATCTTGTGGGCTTCTGCCAAATGAGAATTTTAGAGCATTGCTTAAGCAAAATGAACCCTTTAAGCTGA TAAGTTTGTGTGGAGTCTAACAGTATGTTTGGGTATGCGAGTTACATCCTCAGAATCGCTTAAATTTTTTCAAAAGCAAC AGAGGATGTCTATGAAAAGTCTTTTACCTAATTCAACTTTTCGTTTACTATGATAGTCCTATTATAAAATTTGATGATTC AAATAGAGATTTCTCACCATTAGTTAAATTCCTTTGGACCGTGAAAATGAAAC
CDS sequence (LotjaGi6g1v0162900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCGTCACTCATCGACCAACCACTCTCCCTCCTCCCGCCGTCACCGGAGCCACCGCAGCATCTCCCCGCCGCCGCA AGAGAAGCATCGGCATTCGAGTCGCGGGGCGGAGGCGGACCGTCCGGGTTCTGGTTCGCCGGATCCTCCTCCTCGCTCCC CCTCTCCACGAACGAAGCGCTTGAAGAGAGCTCAACAACCTGAACGTGAGCGCGAGAGGAGCAGAGGGAGGGGTTCGGAG AGGGAAGGTGTTGAGAGGAAGAGGGTGGAGAACGACGAGGAGGGGGACGGCGAGAGGAGCAGAGGGAGGGATTCAGAGAG GAAGAGGACGGAGAACGATGATGAGGGTGACGGTGAGAGGAGCAGAGGGAGGGGTTCGGAGAGGGAGGCTGTTGAGAGGA GGGAGAGGAAGAGGACGGAGAATGATGAGGAGGGTAATGGCGGAGGAAGGAACAGCAGGTCGTCAAGGTCGAGGCACGAG AGGTCATCGCCGGAGCGCCACCACAACGGAAGGAGCAGGCACAGGTCTCAGTCGCCGCAGCGTCACGACTACGCCGGGAA CACAAAGCCTCGTGATGAGCATACAAACTCAAGAGGTGCTGAACAGATGAATGACGATGATTCTATCATGAAGATGAAGG CTGCTGAGGAGGCTCTGGAAGAAAAACAGAAGCAAAAACCTTCATTTGAGCTATCAGGAAATCTTGCCGCTGAAACAAAC CGATTCAGAGGTGTTACTTTGTTGTTCAATGAACCGCCAGAGGCTCGAAAACCTGATGTTAAATGGAGGCTTTATGTTTT CAGGGGTGGTGAAGTGCTGAATGAGCCCCTTTACATTCATCGCCAAAGTTGTTATCTTTTTGGAAGGGAGAGAAGGGTTG CTGATATCCCAACAGATCATCCATCTTGCAGCAAGCAACATGCTGTTATTCAATTCCGGCAAGTTGAAACGGAGCAACCT GATGGTATGTTATCAAAGCAAGTAAGGCCCTACATAATGGACCTCGGAAGCACAAACAAAACTTTCCTTAATGAGAGTCC CATTGAACCTCAACGTTATTATGAACTGAGGGAAAAGGACACCATTAAATTTGGTAATAGTAGCCGAGAATATGTATTAC TACATGAGAACTCTGCTGGATAA
Protein sequence (LotjaGi6g1v0162900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRHSSTNHSPSSRRHRSHRSISPPPQEKHRHSSRGAEADRPGSGSPDPPPRSPSPRTKRLKRAQQPERERERSRGRGSE REGVERKRVENDEEGDGERSRGRDSERKRTENDDEGDGERSRGRGSEREAVERRERKRTENDEEGNGGGRNSRSSRSRHE RSSPERHHNGRSRHRSQSPQRHDYAGNTKPRDEHTNSRGAEQMNDDDSIMKMKAAEEALEEKQKQKPSFELSGNLAAETN RFRGVTLLFNEPPEARKPDVKWRLYVFRGGEVLNEPLYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVETEQP DGMLSKQVRPYIMDLGSTNKTFLNESPIEPQRYYELREKDTIKFGNSSREYVLLHENSAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 207 | 207 | - | – | |
| MobiDBLite | 21 | 38 | 18 | - | – | |
| PANTHER | 46 | 380 | 335 | 2.3E-99 | – | |
| PANTHER | 46 | 380 | 335 | 2.3E-99 | – | |
| MobiDBLite | 61 | 167 | 107 | - | – | |
| MobiDBLite | 176 | 207 | 32 | - | – | |
| Coils | 212 | 232 | 21 | - | – | |
| Gene3D | 246 | 380 | 135 | 1.7E-53 | – | |
| SUPERFAMILY | 251 | 376 | 126 | 8.42E-25 | ||
| CDD | 261 | 368 | 108 | 5.49905E-24 | ||
| SMART | 284 | 348 | 65 | 1.1E-10 | ||
| ProSiteProfiles | 285 | 348 | 64 | 9.636 | ||
| Pfam | 285 | 365 | 81 | 1.2E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0162900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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