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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0164400 |
| Transcript ID | LotjaGi6g1v0164400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT4G16050.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9LNG5|PPP7L_ARATH Serine/threonine-protein phosphatase 7 long form homolog; TrEMBL-Plants: tr|I1N0S4|I1N0S4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0164400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44863983..44868438) extracted from Lotus japonicus Gifu genome v1.2.
CCATGTAAAAATTGGGGATTTTCACCATCGCTCAAGCTGAAGAAGCTCTTCACTTGCATGCCCTCACTCATTCACTCAGA GACCATAGTAACTTTCAATGACTCAAAAAATGGAGGATGAAGAAGCATCAATGGAGGACATAATCGATAAAAGAGAAGAG TTGATGGTTTCACCAGGTGGAAGCAGCCCAACCAGGAGAATAGCCTATTTTATAAAACCTTGTGCAAGCTCCATCCATGG CTGTGATTTACTACCTCCCTTTACCTCTAACCATGCAAATGTAGCTCAGGAAGTGAGATATCATGGATGGAGAATGCCAC ACAAAAAATGGAAAACATGGGTACAGAACATGCAACTCAGGTATGGACATATATGGATAAAAGCTGGCATACACCATGCA ATCAAAGCCTCTACATATGAGATCAACAGGAATGATGAATTGATTCTTGCTCTTGCACAAAGATGGTGTTCCAAGACCAA CACATTCATCTTCCCTTGGGGAGAAGCAACCTTGACATTGGAAGACATGAAAGCTTGTTGGGGTTACTCTGTCATGGGAG GTTCTGTTTCTAGTCCTCTTGAAACCACTGAGGAGAAGGAAATAGAAGCAAAGCTGATTGCATTGAGAAGCATGTTTATC AAATCTAGAGCTAAAAAGGCAACTCAGACCCAATGGATGAAGCATTTCATGGACAATGAAAGCCAATTGGAGCATGAGGG TTTCTTATCTATGTGGTTGTCAAGGTTTGTTTTTCCTGCTATATCAGAAGACACCATTTTGAAATCTGTTTTTTCTATTG CTGTGCATTTAGCAAGAGGGACTAGAATAGCTCTAGCACCTGCAGTTTTAGCTAGTATTTACAGGGATTTGAGTTTACTG AGCAAAAGTGTGAGAAGTGCTGCAACAATGAAGTTGAGAGTCACACTGTGGGCTCCTTTTCAGCTGGTCCAAGTGTGGGC TTTGGAGAGATTTCCAGCACTGCAGCCAAATCCATGTCCAGTTAGGCAAGGGCAACCCATAATGGCTAAATGGGACAGAG TGAAAATGCTGAAAAAGAACAACTTGAATTTGATTCTTGATGATGCTGGGAGTAGAAATGGCTTTCTGTGGCGTCCATAC CAAAATTCTCCACCCCTTTACCTTTATAATGAAAAGGATATGTGGATGTGTGATAACCCATGTTTTGATGATGAGTTGCA AGCGTTTAGTCGATGTTTGAGGGTTTCTGAACTAGTAGGTATGGGGTGTATAGAGAATTACCGACCAAATCGGGTTGCTA TGCAGTTTGGCATGGATCAAGACATTCCTGGAGTGGTTGATCCTAGTAACAAGGATCCTTGGATGAGCTATAGCCAACCA ATCATGGATATAAATTTGTGCCCTGCATTATGTTCCTCCCAACCAAAGGTTACTTCTAGGTACTACAACTGGTGGAAGCA ATTGAATTCAGGCAAGGAAGGAGATACAATGAAAGGCCATGATCATTGTCTGATAAGCAAAAACAGCTCACAGCATTTGT CACCAGCTTTAACTAGGGAGGTAAAATGTGATTTATCTTTTGGCCCACTTCCTGATTTTACTTGCAAGTTTGGAACATGT CAAGTAGGGAATTCTGGGGATAATTCTGAGGATATTGTTGCTGATATGCAAGGAGAAATTGTGAGTGTAGTACCATTTAA TCTTGAAAACCGGATTTTGAAGCTAGAAACAGTGATTGCTAAGCATAAAGAAGCAAAATTTGGCTCTAAAGGTTGAAATA AATCCATAGTACTTGTTGGTTTTAATTACAGACCAATAATTTTTTGTTGATACAGAACCTACTTCATATTTCTGCTAACT CATTGTCTAGTCACTTTCATCAGTTGTAATCAGCAGTAGGTAAATTAATGTGAAGGTCTGAACTTGAGGCTATTATGCAG ATAATGCAAATTTTGAACTCAATGAAGCTATTGATTTTGTTGTATTGAAGAATGTTGAATACCTATTAAGATATAGTTTA TTATTAGTGTTATCTCATAGAGATATAGTTAAGATTTGTTTATCTATTTTAGATTAGTATCTATTTAAATAGAGATGATA TCTATTTAATTAGAGATAGGTTTAGATAGATTTAGTTTGTTTTAATCTCTTTGTTAATCTATATATATTGTAGTCTAGTC AAGTATTATCAATGAAATATAGATATATTTTATCAAATTCAAGTTGGTATCAGAGCAAGTTTCGATCCTACCGCTGTGAG GGGGCTCCTCCCCCGTGAGCCCCCTCATGGCTACTTTCCAAATCTCTTTGGATATATTTTTCGTACTCTGCTTCCGCGCT TGTTAACTCTAGCCGTTTTCTTACGGCCTCGTTCTTTCTAAAATACACTCCCCTTTGTCTTGAAACCGTAGTTGCTTTCG TGATGTCTCTCTCCGCTATTTGGTTTTTGGGTCCTATGTTTTGGGCCTACTTTGACATCTCCTCATTGTGCACTGTTCAC GCTGGTTAGTCAACCCCTCTTTGATTTCTGGTTGTTTTTTCTATCTTCTCCATGGCTGATGCGTTTTGAAGATCACCTGC TAAAGAGGAATTCGGTGTCCTTTGCTCTTTTTTGGATCGCCTCCTGCCACCACTGACCGTCGCTGCCGCCAATGACGACT CATCTGGTTTTGCTTTCAGATCTGGAAGCGTTTTTCTTGAAATTGTGGCTATGCAACCATATGCCACATTACGACTGTTA TTGGATTTGGCAAGTGTGGTATTTTGAGTTTGGAATTTTCAATTCCATTGGAAGCTGGCTAATGGGAATTGCATCATGGG CTGCTACCTTCACGAAAAAAAAAAAAAAAGTTTCACAAATATAAGGATTTCAAGATTCAGAAGAATCAGAACATTGTTGG CTCATGTGATGTCAAGTTCCCAATACGGCTGGAGGGTCTAGCATATTCCCATGGTTTTGGTTGGCATAGTTGTGGTTTTA GAGTTGGAAAAGATTTTTGGATTGTTTTTGGGAATTTCTCTCTCCGGCAGCAGCGGCTTCTCAAGTTAATTATATTTGTT ACAAGCTATGCATATGACATATATGCTCTAGCTTGAGGGGAGGATCTGGATATTGTTAAATCTTAATTATATTTGTTACA AGCTATGCATATGACATGTATGCTATAGCTTGAGGGGAAGTGTTGGATATTGCTAAATATCCTAATAGAGACCACAGTCA ACCACCGCCGACAATCGTTATCCTTGTTGCTGGTTTGGTGGAGGTTGTATCCAAGAATGATGCTTCTATGGTGATTGTTT AATAGCAGCGTGTTTTGGAGTATCCAACAATCGTTCCTTTGCTTTCCTATTTCTCCATAATCCAGTTTGTGCTAATGTTT TTGGGAGAGGCAGAAGCATCAGGTTGAATCTAATTGTATTGCTCCGCTGCATTGTTCTCGCTGGTCCTATTTGTGTTTCG GCCAGATTTGAATTTTAAGGTCTTCTATTTGACGTGTGTTGTGGCGCCACCGTTAATGGTCGTCCAGTCTTCCTCTTCCA GTTTGGTTCATGGGTCTGGTGTGTTTTTCTCATCTGCGAGCGATGTTTCTTGCTGTTTGAGATCTTAGTTTGTGTCTCAT GGTTCGAGATGCTCTTATTATATTGATCTTGGCTGACTTTATGCAATTTGGTTTTGAAGGTGACAATGTCACCTTCGTTT GTTTAGTCTCGATTGTTTGGTTTTCTGGTTTTAGGGCTTCAGCTGCGAGTTGCGCTGGCCCACTCTCTAGTTGAGAGTTA TTGGTTTTGGTTTTAGGGCTTCAGCTGCGAGTTGCGCTGGCCCACTCTCTAATGTTTGAGAGTTGTCTGTGTCAAAGTTG ACACCATTGTTTGTCTTAGAAGCCATTAATCGATTGACCTCAAGTGTGTTTTATTTCTGTGTGGTTGTTGTTGGTGAGTT GTTGTTTCAGCCTTGTTTTGTTTTCGGGCATATTGTTGCTGGTTTTTCGCCCTTGTTTGCTGGCTCAGCTACCCTACGAC ACTCCAGAAGAATTGGTTTTTGTCTTGCATCAGTTTCAGCCAGATCAAGTATGAGAAGTTGTCTTTTGCCTGCCCATGAA TTTACTAGAAGTTTGAAAGGTTATTCAATTCAGAGATTCGCCAAGACCGTCATTATTAAGGATATCTATTAAGATAATTT TCTTCTTGGGTTAGATTTGTTACAAGCTTAAAGCTAAGTAAGCTTTAGCTTGAGGGGGAGTGTTGAATACCTATTAAGAT ATAGTTTATTATTAGTGTTATCTCATAGAGATATAGTTAAAATTTGTTTATCTATTTTAGATTAGTATCTATTTAAATAG AGATGATATCTATTTAATTAGAGATAGGTTTAGATAGATTTAGTTTGTTTTAATCTCTTTGTTAATCTATATATATTGTA GTCTAGTCAAGTATTATCAATGAAATATAGATATATTTTATCAAATTCAAGTAAGA
CDS sequence (LotjaGi6g1v0164400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCAAAAAATGGAGGATGAAGAAGCATCAATGGAGGACATAATCGATAAAAGAGAAGAGTTGATGGTTTCACCAGG TGGAAGCAGCCCAACCAGGAGAATAGCCTATTTTATAAAACCTTGTGCAAGCTCCATCCATGGCTGTGATTTACTACCTC CCTTTACCTCTAACCATGCAAATGTAGCTCAGGAAGTGAGATATCATGGATGGAGAATGCCACACAAAAAATGGAAAACA TGGGTACAGAACATGCAACTCAGGTATGGACATATATGGATAAAAGCTGGCATACACCATGCAATCAAAGCCTCTACATA TGAGATCAACAGGAATGATGAATTGATTCTTGCTCTTGCACAAAGATGGTGTTCCAAGACCAACACATTCATCTTCCCTT GGGGAGAAGCAACCTTGACATTGGAAGACATGAAAGCTTGTTGGGGTTACTCTGTCATGGGAGGTTCTGTTTCTAGTCCT CTTGAAACCACTGAGGAGAAGGAAATAGAAGCAAAGCTGATTGCATTGAGAAGCATGTTTATCAAATCTAGAGCTAAAAA GGCAACTCAGACCCAATGGATGAAGCATTTCATGGACAATGAAAGCCAATTGGAGCATGAGGGTTTCTTATCTATGTGGT TGTCAAGGTTTGTTTTTCCTGCTATATCAGAAGACACCATTTTGAAATCTGTTTTTTCTATTGCTGTGCATTTAGCAAGA GGGACTAGAATAGCTCTAGCACCTGCAGTTTTAGCTAGTATTTACAGGGATTTGAGTTTACTGAGCAAAAGTGTGAGAAG TGCTGCAACAATGAAGTTGAGAGTCACACTGTGGGCTCCTTTTCAGCTGGTCCAAGTGTGGGCTTTGGAGAGATTTCCAG CACTGCAGCCAAATCCATGTCCAGTTAGGCAAGGGCAACCCATAATGGCTAAATGGGACAGAGTGAAAATGCTGAAAAAG AACAACTTGAATTTGATTCTTGATGATGCTGGGAGTAGAAATGGCTTTCTGTGGCGTCCATACCAAAATTCTCCACCCCT TTACCTTTATAATGAAAAGGATATGTGGATGTGTGATAACCCATGTTTTGATGATGAGTTGCAAGCGTTTAGTCGATGTT TGAGGGTTTCTGAACTAGTAGGTATGGGGTGTATAGAGAATTACCGACCAAATCGGGTTGCTATGCAGTTTGGCATGGAT CAAGACATTCCTGGAGTGGTTGATCCTAGTAACAAGGATCCTTGGATGAGCTATAGCCAACCAATCATGGATATAAATTT GTGCCCTGCATTATGTTCCTCCCAACCAAAGGTTACTTCTAGGTACTACAACTGGTGGAAGCAATTGAATTCAGGCAAGG AAGGAGATACAATGAAAGGCCATGATCATTGTCTGATAAGCAAAAACAGCTCACAGCATTTGTCACCAGCTTTAACTAGG GAGGTAAAATGTGATTTATCTTTTGGCCCACTTCCTGATTTTACTTGCAAGTTTGGAACATGTCAAGTAGGGAATTCTGG GGATAATTCTGAGGATATTGTTGCTGATATGCAAGGAGAAATTGTGAGTGTAGTACCATTTAATCTTGAAAACCGGATTT TGAAGCTAGAAACAGTGATTGCTAAGCATAAAGAAGCAAAATTTGGCTCTAAAGGTTGA
Protein sequence (LotjaGi6g1v0164400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQKMEDEEASMEDIIDKREELMVSPGGSSPTRRIAYFIKPCASSIHGCDLLPPFTSNHANVAQEVRYHGWRMPHKKWKT WVQNMQLRYGHIWIKAGIHHAIKASTYEINRNDELILALAQRWCSKTNTFIFPWGEATLTLEDMKACWGYSVMGGSVSSP LETTEEKEIEAKLIALRSMFIKSRAKKATQTQWMKHFMDNESQLEHEGFLSMWLSRFVFPAISEDTILKSVFSIAVHLAR GTRIALAPAVLASIYRDLSLLSKSVRSAATMKLRVTLWAPFQLVQVWALERFPALQPNPCPVRQGQPIMAKWDRVKMLKK NNLNLILDDAGSRNGFLWRPYQNSPPLYLYNEKDMWMCDNPCFDDELQAFSRCLRVSELVGMGCIENYRPNRVAMQFGMD QDIPGVVDPSNKDPWMSYSQPIMDINLCPALCSSQPKVTSRYYNWWKQLNSGKEGDTMKGHDHCLISKNSSQHLSPALTR EVKCDLSFGPLPDFTCKFGTCQVGNSGDNSEDIVADMQGEIVSVVPFNLENRILKLETVIAKHKEAKFGSKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 456 | 438 | 3.7E-141 | – | |
| PANTHER | 19 | 456 | 438 | 3.7E-141 | – | |
| Pfam | 97 | 447 | 351 | 6.1E-115 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0164400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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