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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0165100 |
| Transcript ID | LotjaGi6g1v0165100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT1G32120.1 serine/threonine-protein phosphatase 7 long form-like protein; Swiss-Prot: sp|Q9LNG5|PPP7L_ARATH Serine/threonine-protein phosphatase 7 long form homolog; TrEMBL-Plants: tr|A0A0S3S7S4|A0A0S3S7S4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0165100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44920583..44922978) extracted from Lotus japonicus Gifu genome v1.2.
TATTACTCTTTTGGTCATACATGAATTGAGACTTGCTTGTTTTATATGTGAAGTTGCAAGAAACAAAAGGGTAAGCTGGG CTTTGCATACAAGCTTCTTCCTTTACAATAAGGGTTTAGTATAATAATGCTTTTCTGGTAATGTTTGCACACAGCTTACT GTCTACGTGATGGTCTAAGTAGAAAAAATCAACTCTTCAACACCAGATTCTCTAAGTACTAGTGGTGATATATAGTGGTT TTCATATGATAGCCATGAATGAACCATTGGAGACCATCATGGAGGCAAGGGAAGATTTCATGGTTTCACCAGCTGGTGAT AGTGAACCAACTTTCAGAACAGCCCATTTTCTGAAACCCTTTGCTACCTCCATTGATGGAAAAGTTTCTGAGGCTCTCTC ATCCTCTTTGCAACTCAGGTTTGAACCAAAGGAGTGCCCTTTGAGAGTCTATTTCAATGGGTGGCGCAACACTCATGAGA GATGGAACAGCTGGGTGGATGCACTTCATCTCAAGTATGAAGCTGTGTGGAAGAAAGTTGGAATCTTTGAAGCTGTCATA AACACCAAGTGCTACATTGTGAGAAATCATGACTTGGCATTTGGGGTTGCAGAAAAATGGTGTTCTAAGACAAACACCTT TGTGTTTCCATGGGGTGAGGCCACAATCACATTGGAGGATGTCATGGTTTTGGGGGGTTACCCTGTTCTTGGTGATCCTG TTTTCACCTCACTTCAGAACCAGGAAATGAAAGAAGCAGAACAAAAATTGATTCTTGCAAGACAAGAACCTTGGATGGGT AAAAAAGGTAAGACCTTCACTTCAACATGGATAGATTTTTTCATGAATAGTGGGAGTGATATTGAGCATGAAGCATTCCT TGCTACTTGGTTGTCAATGTTTGTTTTCCCTCACAAAACATTTGTAAAACGGTCTCTATTCCCTATTGCTATTCTTCTAG CTAGAGGGAGTCCCATAGCTTTGGCACCAGCAGTTTTGGCTAGCATATATAAGGATTTGTGTTTGTTGAAAGAATTAATA GCTGATTTGACAAAAAATCCAGTAGTTGGTGATAAAAAGCACATGGGTTTAGATGTTACTCTTGAGTCACCCTTTTACTT GGTTCAAATTTGGGTGTGGGAAAGGTTCCAAAATTTGCAGCCAGAGCCCAATTTAACCAACAATGTAGACACTGCACTGT TTAGGTGGCACAAGGTGAGGGGCTTGAAAATAGACAATGTGAGGCTGGCACTAGATTCAGCTATTGATGATTTTCTTTGG CGTCCATATGTTAGATTTGCTGGTAAGTACAGGACATTTTATCCAGAAAATGAAACTTTTGTACAATTTGAGGCAGATTT GGACAAAGAACTAGCCTCATTTATTAGATGCACAAGAGTTTCTGAGATTGTTGGAATTGACTCTACCATAATGCAGTACC TCCCACATAGAGTTTCTATGCAATTCGGAATGGATCAAGATGTTCCGGATTCTGTGCCGGTATTCAAAAGGACTAAAGCT ATTGCTTGGGAAAATTACTGCAGGCCCATTTCTGATAGGAATTTGTATTTTCCATCAAGGCTTTTTGAGGCAGATGTTAC CACACGTTATGAAATGTGGTGGAAGCAATCAATATTGCATCAACATGATTTTGCTATGAGAAGTGCAAGGCCATCAAATT GTGGGCCTCATGTAGGAGAAGTAAACAATAGTGGTGATGATCCTGATGTTCCACCTGGAATTCCTCTCAAACAAATTAGC ACAACTATTCTTGGGAAATCCTATGATCCTTCAAACACTGTGAATGGTGAAAATGAAAATGTTGCTGATGTACCTCCTGA GTTTCTTCCTAATCGTTTGAAAAATGTTCCTTCTGGGAATTCTGTTCAAGATGGTTTGAAAGAAAAAGATATAGCTGAAC CTTCATTAAGGAGTTTGAAGAAAGATTCTGAAGGTGCAAAAGGGATTAAAGCATCAAGGATGTCTGGTGACAAAGTAAAG CTATCTGGGATCCAAGGTGAAAGACATAGCTGTGTAAATGTAGTGGACCTTGAAGAGAGAATTAGCAGACTTGAGGGAGT GACTGCAAAGTTAAAGAAAGCAAGGTTTGGTAACATATGAAAAATTATTTGCTCACCGCTTGTAAACATGTGTTGTGTCC TCCTTTTGTGTGCCTTTATTTGTTGGTTTAGCTGATAGGTGTTCTGTAATTTGACTCATTTAGAATCAATATCAAAATCA ATATCAATATCAATATATATTAAAAAAGAACAACTTCTAGCATGACGTGTCGCTCTCACATGCCAAGTTAGTGACGTGTC GCTCCCAGATTAATTCTCACCTAATATTTTACATGTAAGCTCTTTCTCCTTGGCCTCACTTGCCACATGTGCCTTG
CDS sequence (LotjaGi6g1v0165100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGCCATGAATGAACCATTGGAGACCATCATGGAGGCAAGGGAAGATTTCATGGTTTCACCAGCTGGTGATAGTGA ACCAACTTTCAGAACAGCCCATTTTCTGAAACCCTTTGCTACCTCCATTGATGGAAAAGTTTCTGAGGCTCTCTCATCCT CTTTGCAACTCAGGTTTGAACCAAAGGAGTGCCCTTTGAGAGTCTATTTCAATGGGTGGCGCAACACTCATGAGAGATGG AACAGCTGGGTGGATGCACTTCATCTCAAGTATGAAGCTGTGTGGAAGAAAGTTGGAATCTTTGAAGCTGTCATAAACAC CAAGTGCTACATTGTGAGAAATCATGACTTGGCATTTGGGGTTGCAGAAAAATGGTGTTCTAAGACAAACACCTTTGTGT TTCCATGGGGTGAGGCCACAATCACATTGGAGGATGTCATGGTTTTGGGGGGTTACCCTGTTCTTGGTGATCCTGTTTTC ACCTCACTTCAGAACCAGGAAATGAAAGAAGCAGAACAAAAATTGATTCTTGCAAGACAAGAACCTTGGATGGGTAAAAA AGGTAAGACCTTCACTTCAACATGGATAGATTTTTTCATGAATAGTGGGAGTGATATTGAGCATGAAGCATTCCTTGCTA CTTGGTTGTCAATGTTTGTTTTCCCTCACAAAACATTTGTAAAACGGTCTCTATTCCCTATTGCTATTCTTCTAGCTAGA GGGAGTCCCATAGCTTTGGCACCAGCAGTTTTGGCTAGCATATATAAGGATTTGTGTTTGTTGAAAGAATTAATAGCTGA TTTGACAAAAAATCCAGTAGTTGGTGATAAAAAGCACATGGGTTTAGATGTTACTCTTGAGTCACCCTTTTACTTGGTTC AAATTTGGGTGTGGGAAAGGTTCCAAAATTTGCAGCCAGAGCCCAATTTAACCAACAATGTAGACACTGCACTGTTTAGG TGGCACAAGGTGAGGGGCTTGAAAATAGACAATGTGAGGCTGGCACTAGATTCAGCTATTGATGATTTTCTTTGGCGTCC ATATGTTAGATTTGCTGGTAAGTACAGGACATTTTATCCAGAAAATGAAACTTTTGTACAATTTGAGGCAGATTTGGACA AAGAACTAGCCTCATTTATTAGATGCACAAGAGTTTCTGAGATTGTTGGAATTGACTCTACCATAATGCAGTACCTCCCA CATAGAGTTTCTATGCAATTCGGAATGGATCAAGATGTTCCGGATTCTGTGCCGGTATTCAAAAGGACTAAAGCTATTGC TTGGGAAAATTACTGCAGGCCCATTTCTGATAGGAATTTGTATTTTCCATCAAGGCTTTTTGAGGCAGATGTTACCACAC GTTATGAAATGTGGTGGAAGCAATCAATATTGCATCAACATGATTTTGCTATGAGAAGTGCAAGGCCATCAAATTGTGGG CCTCATGTAGGAGAAGTAAACAATAGTGGTGATGATCCTGATGTTCCACCTGGAATTCCTCTCAAACAAATTAGCACAAC TATTCTTGGGAAATCCTATGATCCTTCAAACACTGTGAATGGTGAAAATGAAAATGTTGCTGATGTACCTCCTGAGTTTC TTCCTAATCGTTTGAAAAATGTTCCTTCTGGGAATTCTGTTCAAGATGGTTTGAAAGAAAAAGATATAGCTGAACCTTCA TTAAGGAGTTTGAAGAAAGATTCTGAAGGTGCAAAAGGGATTAAAGCATCAAGGATGTCTGGTGACAAAGTAAAGCTATC TGGGATCCAAGGTGAAAGACATAGCTGTGTAAATGTAGTGGACCTTGAAGAGAGAATTAGCAGACTTGAGGGAGTGACTG CAAAGTTAAAGAAAGCAAGGTTTGGTAACATATGA
Protein sequence (LotjaGi6g1v0165100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIAMNEPLETIMEAREDFMVSPAGDSEPTFRTAHFLKPFATSIDGKVSEALSSSLQLRFEPKECPLRVYFNGWRNTHERW NSWVDALHLKYEAVWKKVGIFEAVINTKCYIVRNHDLAFGVAEKWCSKTNTFVFPWGEATITLEDVMVLGGYPVLGDPVF TSLQNQEMKEAEQKLILARQEPWMGKKGKTFTSTWIDFFMNSGSDIEHEAFLATWLSMFVFPHKTFVKRSLFPIAILLAR GSPIALAPAVLASIYKDLCLLKELIADLTKNPVVGDKKHMGLDVTLESPFYLVQIWVWERFQNLQPEPNLTNNVDTALFR WHKVRGLKIDNVRLALDSAIDDFLWRPYVRFAGKYRTFYPENETFVQFEADLDKELASFIRCTRVSEIVGIDSTIMQYLP HRVSMQFGMDQDVPDSVPVFKRTKAIAWENYCRPISDRNLYFPSRLFEADVTTRYEMWWKQSILHQHDFAMRSARPSNCG PHVGEVNNSGDDPDVPPGIPLKQISTTILGKSYDPSNTVNGENENVADVPPEFLPNRLKNVPSGNSVQDGLKEKDIAEPS LRSLKKDSEGAKGIKASRMSGDKVKLSGIQGERHSCVNVVDLEERISRLEGVTAKLKKARFGNI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 517 | 503 | 4.9E-178 | – | |
| PANTHER | 15 | 517 | 503 | 4.9E-178 | – | |
| Pfam | 99 | 460 | 362 | 4.4E-110 | ||
| Coils | 161 | 181 | 21 | - | – | |
| Coils | 599 | 619 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0165100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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