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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0165200 |
| Transcript ID | LotjaGi6g1v0165200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 7 long form like; TAIR: AT1G32120.1 serine/threonine-protein phosphatase 7 long form-like protein; Swiss-Prot: sp|F4IFD0|MAIL2_ARATH Protein MAIN-LIKE 2; TrEMBL-Plants: tr|A0A151T1G0|A0A151T1G0_CAJCA Serine/threonine protein phosphatase 7 long form isogeny; Found in the gene: LotjaGi6g1v0165200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44923894..44927126) extracted from Lotus japonicus Gifu genome v1.2.
GTGTGAGTGTCAGGGTCTCTGCAATTTCACAAAGCGACGATTCTGAAAACCTGGGTCTTCAGTTTTGGTGCCATGGATGA ACCTGAACCCATCATGGAGGTGAAGGAAGATTTCATGGTTTCACCAGCTGGTGACAGTGACCCATCTCTCAGAACAGCCC ATTTTCTGAAACCCATTGCTAATGGTAATGGAACAGTTTCTGAGTCTGAGACTCCATTTTTCTCTGGGCACCCCATTTTT GAACAGTGGCCTCTGAAAGTCCATTTCAATGGGTGGCGCAACTTGCATCCGAGATGGGTTAGGTGGGTGAATGCACTTCG TCTCAGGTATGAATCTGTGTGGAAGAAAGCTGGAATGTTTGATGCTATCATGAGCACAACGTGCTACATTATGAGAAACC GTGATTTGGCTTTTGGGGTTGCAGAGAAATGGTGTTCTGAGACAAATACCTTTGTGTTTTCATGGGGTGAGGCCACTATC ACGTTGGAGGATGTCATGGTTTTGGGGGGTTACCCTGTTGTTGGTGACCCTGTTTTCACCTCACTTGAGAGCCCAGAAAT GAGAGAGGTTGAGCAAAAATTGGTCCGTGCAGCGCAAGAACATTGGCGGAGTAAAGGCCTTAACCCTTACACATCAAAAT GGATAGATTTTTTCATGAATGGTGGGAGTGAAATTGAGCATGAAGCTTTCCTTGCTGCTTGGTTGTCAGTGTTTGTTTTT CCTCGTAACAACTTGGTAAATAAGTTGTTGTTTCCTATGGCTGTTCTTCTTGCTAGAGGTAATCCCATTGCTTTGGCACC AGCTGTTTTGGCTAGCATATATAAGGATTTGGGTGTGTTGAAACAAACAATAGCTGATTTGACAAAAGAATTAGTAGTTG GTTATGAATTGGGGTTTGAGTTAGAGGTTAATCTTTGGTCACCCTTTAACTTGGTTCAAGTTTGGGTGTGGGAAAGGTTT AAGAATTTGCAGCCAGAGCCTAATTTAACTAATGATGGAGACCCTTTATTGTTTAAGTGGAGCAAGGTTAGGGCCTTGGA AATTGATAATGTTAGGCTGGCACTGGACTTAGCTATAGATGATTTTGTTTGGCGTCCATATGTTAGATATGGTGGTAAGT TCAGGGTGTTTTATCCCGAAAATGAAATTCAGCAGGTACCATTTGAGGCTGATTTGAGCAAAGAGCTAGCCTCATTTGTT ACTTGCATGAGAGTTTCTCAGCTTGTTGGATTTGACTCAACTATAATGCAGTACTTCCCGCATAGAGTTGCTATGCAATT CGGAATGGATCAAGATGTTCCGGGTCGTGTGCCTGTATTCAATGGAACTAGAGCTACTGCTTGGGAAAATTACTGCAGGC CCATTTCTGATAGGAATTTGTATTTTCCGTCAAGGCTTTTTGAGGCAGATGTTACCACACGTTATGCAAGGTGGTGGAAG CAATCAGTATTGCATCATCAGGATTTTGCTAAGAATATTGTGCGGAGGAAGAGAAGTGCAAGGGCATCAAAACGTGGACC GCATGTAGTTAAAGCAAACATAAATGGTAATGATGCTATTGCTGATGCTCCACCCTTGTCTCCTCCCAAACTTGTTAGCA CTGTTATTCTCAGAAAATCTTGTGATGATGGTTTGAAAACTGTCAAGGTTGAAAATGATGCTGATGTACCTTCTCGTTTT CTTCCTAAACAATTGCATATAGTTCCTTTTGGAAATTCTGTTCAAGATGGTTTGATAGCTAATGAAGATACTGGTGTTGA TGTTCCAACCAATTTTCCCCCAAAGCTTGATGCACTGAATCCTATGACGAAGTCAAATGCAAAAGATAACACTGAACCTT CATTAGGGAGTTTGAAGGAAGATCTTGAAGATGCAAATGGGATTAAAGGATCAAGGCTGTCTAGTGACAAAGTTAGGCTA TTTGAGATCCCAGTTGAAAGCTGTAGCTGTAGCTGTGTAAAAGCACTGGACAAGAGACTTAGCAGACTTGAGAGAGAGAT TTCAAGATTAAAGAAAGCAAGGTTTGGCAATATTTGAAAAATTATTAGGCTCATTACACTAAAACTTCATCACTTGTTAA GATGTGATGTGTCCTTTATGCCTTGGGAGAACATAATGAAAGGTGGTGAGAATTTAGATTTGAAACTGATGCAATGTGTG GTCTTAATTTAAAGGTTACTTATGATCTTCTTGTTCTGATGCTCTCTCTTCTAGCACAAAAATTTAGAAATATATAGTTT TCTGATTATGTTTGCCCAACTTGAAGTAATACTTGCTATATCCACATTTATTTGGTGTTATAATACACTGTAAATTTAAG TTTTAACCAAGTTATTGCGGCATGTTTTTCTTATCTTATATGCTTCTATACTTGGTATCAAAGAATTAGTTTTGAAGATG AAGTACATAAAATGACTATTTCAATAGGATGTGCTATTGTGTGCCTTTATTTGTTGTTTTAGCTGATAGGTGCTCTCTAA TTTTACTCTATGTCTGCCTAAATGTCAGTTCCTGATTCAGTTCAACTCTTGGCTCCCTTTAAGCATCTCTATTTCCTAGT TATTGAGTTAATTCTCATTCATTTAACCAAGCTTAATCATTTTATTCTATTAGATAAGACAGTAAGCATATTGGAGTTCC TACAAACTATCACATTACCCCTTAATAGCTACACAAGAGTTTTTTACTGAGAGCATTTAACATTGTCTGCTCTCCTTGCT CCTACTTCTACCTCTCTTTTTTCATGTATCTAAGTTTTTCAAAGCTGCTATATTTGAGGATTTGCTTTGATGCACATAAC TAAGAAAAGTATAACAAGTGGCATGAAAATTGAATGAGTGCTGGTAGTTGCAGACTAATTTAAGGATTGCTAATTGTATT TGTATATGCCTGTGTCATTGACACTGCAGGTTGCACTAGAACTGTCCAAGATCAACTCGCGAGCCCAGCCGTCTCAACCC AGCTCGTCAACAGGTTGGGTTGATTGTACAATCCAGCCCATACGGTGTTATTGTGGTCCCTATAAAAAATTGGTACTATT AATCCAGCCCTGATAAATTAAATTTAAATTGGTCCCTATAGAAAATTTCATAGCTTTTAGTTGCTAAAAAAATTATGTTT GTTTAATATGGTGTTATTGTGGTCGTTTTTCTAATTTGGTGTTAGGTTGCATTTGTCATTTTTATTACACTTTTGCTTAT TTTTTTTCTTCATAGGAAAATATAACACGGTTG
CDS sequence (LotjaGi6g1v0165200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAACCTGAACCCATCATGGAGGTGAAGGAAGATTTCATGGTTTCACCAGCTGGTGACAGTGACCCATCTCTCAG AACAGCCCATTTTCTGAAACCCATTGCTAATGGTAATGGAACAGTTTCTGAGTCTGAGACTCCATTTTTCTCTGGGCACC CCATTTTTGAACAGTGGCCTCTGAAAGTCCATTTCAATGGGTGGCGCAACTTGCATCCGAGATGGGTTAGGTGGGTGAAT GCACTTCGTCTCAGGTATGAATCTGTGTGGAAGAAAGCTGGAATGTTTGATGCTATCATGAGCACAACGTGCTACATTAT GAGAAACCGTGATTTGGCTTTTGGGGTTGCAGAGAAATGGTGTTCTGAGACAAATACCTTTGTGTTTTCATGGGGTGAGG CCACTATCACGTTGGAGGATGTCATGGTTTTGGGGGGTTACCCTGTTGTTGGTGACCCTGTTTTCACCTCACTTGAGAGC CCAGAAATGAGAGAGGTTGAGCAAAAATTGGTCCGTGCAGCGCAAGAACATTGGCGGAGTAAAGGCCTTAACCCTTACAC ATCAAAATGGATAGATTTTTTCATGAATGGTGGGAGTGAAATTGAGCATGAAGCTTTCCTTGCTGCTTGGTTGTCAGTGT TTGTTTTTCCTCGTAACAACTTGGTAAATAAGTTGTTGTTTCCTATGGCTGTTCTTCTTGCTAGAGGTAATCCCATTGCT TTGGCACCAGCTGTTTTGGCTAGCATATATAAGGATTTGGGTGTGTTGAAACAAACAATAGCTGATTTGACAAAAGAATT AGTAGTTGGTTATGAATTGGGGTTTGAGTTAGAGGTTAATCTTTGGTCACCCTTTAACTTGGTTCAAGTTTGGGTGTGGG AAAGGTTTAAGAATTTGCAGCCAGAGCCTAATTTAACTAATGATGGAGACCCTTTATTGTTTAAGTGGAGCAAGGTTAGG GCCTTGGAAATTGATAATGTTAGGCTGGCACTGGACTTAGCTATAGATGATTTTGTTTGGCGTCCATATGTTAGATATGG TGGTAAGTTCAGGGTGTTTTATCCCGAAAATGAAATTCAGCAGGTACCATTTGAGGCTGATTTGAGCAAAGAGCTAGCCT CATTTGTTACTTGCATGAGAGTTTCTCAGCTTGTTGGATTTGACTCAACTATAATGCAGTACTTCCCGCATAGAGTTGCT ATGCAATTCGGAATGGATCAAGATGTTCCGGGTCGTGTGCCTGTATTCAATGGAACTAGAGCTACTGCTTGGGAAAATTA CTGCAGGCCCATTTCTGATAGGAATTTGTATTTTCCGTCAAGGCTTTTTGAGGCAGATGTTACCACACGTTATGCAAGGT GGTGGAAGCAATCAGTATTGCATCATCAGGATTTTGCTAAGAATATTGTGCGGAGGAAGAGAAGTGCAAGGGCATCAAAA CGTGGACCGCATGTAGTTAAAGCAAACATAAATGGTAATGATGCTATTGCTGATGCTCCACCCTTGTCTCCTCCCAAACT TGTTAGCACTGTTATTCTCAGAAAATCTTGTGATGATGGTTTGAAAACTGTCAAGGTTGAAAATGATGCTGATGTACCTT CTCGTTTTCTTCCTAAACAATTGCATATAGTTCCTTTTGGAAATTCTGTTCAAGATGGTTTGATAGCTAATGAAGATACT GGTGTTGATGTTCCAACCAATTTTCCCCCAAAGCTTGATGCACTGAATCCTATGACGAAGTCAAATGCAAAAGATAACAC TGAACCTTCATTAGGGAGTTTGAAGGAAGATCTTGAAGATGCAAATGGGATTAAAGGATCAAGGCTGTCTAGTGACAAAG TTAGGCTATTTGAGATCCCAGTTGAAAGCTGTAGCTGTAGCTGTGTAAAAGCACTGGACAAGAGACTTAGCAGACTTGAG AGAGAGATTTCAAGATTAAAGAAAGCAAGGTTGCACTAG
Protein sequence (LotjaGi6g1v0165200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEPEPIMEVKEDFMVSPAGDSDPSLRTAHFLKPIANGNGTVSESETPFFSGHPIFEQWPLKVHFNGWRNLHPRWVRWVN ALRLRYESVWKKAGMFDAIMSTTCYIMRNRDLAFGVAEKWCSETNTFVFSWGEATITLEDVMVLGGYPVVGDPVFTSLES PEMREVEQKLVRAAQEHWRSKGLNPYTSKWIDFFMNGGSEIEHEAFLAAWLSVFVFPRNNLVNKLLFPMAVLLARGNPIA LAPAVLASIYKDLGVLKQTIADLTKELVVGYELGFELEVNLWSPFNLVQVWVWERFKNLQPEPNLTNDGDPLLFKWSKVR ALEIDNVRLALDLAIDDFVWRPYVRYGGKFRVFYPENEIQQVPFEADLSKELASFVTCMRVSQLVGFDSTIMQYFPHRVA MQFGMDQDVPGRVPVFNGTRATAWENYCRPISDRNLYFPSRLFEADVTTRYARWWKQSVLHHQDFAKNIVRRKRSARASK RGPHVVKANINGNDAIADAPPLSPPKLVSTVILRKSCDDGLKTVKVENDADVPSRFLPKQLHIVPFGNSVQDGLIANEDT GVDVPTNFPPKLDALNPMTKSNAKDNTEPSLGSLKEDLEDANGIKGSRLSSDKVRLFEIPVESCSCSCVKALDKRLSRLE REISRLKKARLH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 501 | 491 | 1.6E-178 | – | |
| PANTHER | 11 | 501 | 491 | 1.6E-178 | – | |
| Pfam | 94 | 456 | 363 | 8.3E-111 | ||
| MobiDBLite | 573 | 598 | 26 | - | – | |
| Coils | 629 | 649 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0165200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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