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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0167600 |
| Transcript ID | LotjaGi6g1v0167600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | actin cytoskeleton-regulatory complex pan-like protein; TAIR: AT1G50660.1 actin cytoskeleton-regulatory complex pan-like protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|K7MQW8|K7MQW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0167600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45211950..45216927) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGACAGCCGTCTAACTTCTTAACATACTCAACGACGCTGACATTCCTAGCTAAAGATCTGTCTACTAAATGATGACC AGAGTTGCCTTCTATATATTAACTTCTCTTTATCAACTCATTTTAATAGATGAAGAAATAAGTGGTATGATATATGATAT ACGTCTTCGTATAATCGAGATGTTGGTAGTAAGATATTTTCATGTTGTAATATTTGTAATATCAAAGGTAAAAGAGATAC GTTGACCGTAGAAATATACCCTATGCCTGTGTGTGCATCATTTCTTCAGTTCACACTACATTCAGCACACAACACAACCC AAGTTCCACAAAGAAGAAGATGAAGCTCTTCCTCTGATTCAGTGATTCTCTCTTCCTCACACCACACACTTCCTTCATTC ACAAACTCAGATTCCTCCTTCTCTCACTGTGTTGTTCTTTGAAGCATTTCATCAAACACAACAGCTCCACTGTACTGGGT CTTCCTCAAATGCCCGACACTCACCGGCGACGATGAAGATCTCCAGCAACTCTAACTTACCACCGCCGCCATTCCCGGTG GGCATTGCTCACAACTCCCTGAACCCCTCGCCGGACTCGGATCTTCGACCGTACCGGAGAACATCCCGCCGGAAGCCCAG GACGCCGGCTACACGGTTGAGGAGAAGCGGGGCATCGGTAGGCAAACGGAGCAGGCCCGAAACCCCTTTGTCGAAGTGGA AGATCCATGAAGATAGAGAGAGGTGTGGCGCCGGCGGCGATCCGATCGAGGAGCCTGACAGTAGACCATGCCGGAAAAGG GAGCCGAAACAGCCGGTTGTTGTCTCGGCGAGGAAGCTCGCAGCTGGTCTGTGGCGGCTTCAGCTGCCGGAGGTTGCGGC GGGTGATCCTGGAAGACGAGTTGGTTCGAAGCTTCAGGTGAAGCTTCTCAGGGTTTTCTTTTGATCAAGAACATTTCAGT TTCTCAATCACTTGTTACTTGCATTTTATGTTTCTAGTTGAAATATGTGTTTTTCTTCTGCAATGTGCTTTACTTTGTTG TTGAGGTTTAATCTTTTATGCTTATTTTGTTGTTTGCTTAGTTTTGAAGTCTAAGTTGAGTTTGACCTTTTTGATTCCCT CCTTTTTCATCATTCTGCATGTTCATTTTCTGTGTTAAGGGCACTTTAATTAGACTTTCAGTTGCCATAATACCCTTTTT TTCCCCTCTCTAGGGTACTACTACCTTTGGTGATTTGGCTGAGTTTTTATTGGTTGTTGCTTTTCGCGTTAAATGCTAGA AGTTCATTAAGTATAATCAGCTATAAATAAATGATTGATAACAAATGATTAATGAGTAATGGTGTGCAAGGATAAAAAGA TGTGTACCGGATTAATATTTAATAGTGATCCTTGACCTTCAATGAAAGGGGGGAAAATGTTCTATTGTTGACTCATGAAT GGTTAGGTCTATTGCAAAAGCCATTATTGTTTTTGGTAATAATTGGAGAAGTGAGTTGACTAGGGTTTGTCCGGGGAGAT GGTTGAATTAATGTTATAGATATTGTTAATTATCTGTGGTGTAAATATTCACATTTGGAACTCTTATGCTTTCAATGCTT GATCTTGATTAAACTGTGTAATCTGCTGATTTGTATTCCTTATTTACTAGATTCTGTTATTAGGTATCTATGCATTTCTG TTGACATTGGAGAGTTGTTTTTCTTTGATGTATGTCGGTGCCATGTAATTATTGTCGTTATTTTTAGAGCTTAGCAGTTT GTTTGCATTATAAATTTTATAGCTTTCCACTTTTTGTTTTATAACGGATATCACATATCTGCAGCATGAAGTTGGGCATG TAAACCATCCCTTTCTCAGTCATCAAAATGGCATGATGCATGGTTCCGCTATGAAGAATCCATCACAAAGTCCTCGTTTC ATTTCTGGGACAATGGTTTGTGAGGTATTATGTTTCTTATTTGCTACATAAATATCTCCATCACAAGTTTTAATGGCTCT TGATATTTCAAGATTATTGAGTGAAGGCCAATAGGCCATATATGTGAAGAGTAAAACCTGAATGAAAGTATGGGGCCTAG GTCCCAAACAAGATAGAAACTATTTGGAGACTACTCTAGGTACAGAGGTCCCATTACAATCATGACTCAAAAGACTAGTA GATTGTAAGAACAATAGGATGATCATTTCAGATTTTGATCCTTCTACCATGAGCAAGAGCACTAGACAGTCTGCACACCT AGTTTGCTTCTCTGTATTGTTGCATGCTATCGACCAGCTAATACCTCTTCAAAAGCAACTTGATAATCAATTAATCATTA TAGTTCTGTAATTGGTATCATTTCCATTACCATCACCCTTGATTGTATGAAAGAAACCTACTAACAAATGCCTTTTAATT AAGATAAGTCTATGCTTTTTTTATGCTAAAGATTCACAGATATATTGTACTATTTTAGCATTAGTCATGATCTACTATCA TGGAAATCTAACAATATATAAAATCCATGCACGAAGTACAGACATATGTTCATGTAGGCTGACATGAAAGCAGCCCAAGT TGAACTTCTAAACAAATAAAGAGACATTATACTGAAGATTAAGAAATGAAATTTAGTGTTGCTTAGATCTATGCTATCCA AACGTGTGAGCTTTTTGAAAAGTGCATGGGTAAAACATTTTCACATTGCTACATAAACTAACATAGTTAAGTATCATTTT AAATATCATTTATGGAAGGAAGTATTTTCTGGTTGAGGAACGAGTTTAAAAGTGTTTCAACATATAAGAGTAGGCTATTG AAGTGCTGATCATAAATGAACTTTGTTCTTCTGCAGCCTTCTTTACAGCTTTCTAATACGGCAATGGAAGGGGCAACGAA GTGGGATCCTGTTTGCTTTAAAACATCAGATGAGGTGCAGCATTTCTACAGCCAGATGAAATTCCTTGATCAAAAGGTCA GCACTGTTTCTGCTGCGTCTGCTCTTGAAGCTGAACTGGAGCAGGCTCGTGTACAGATTCAGGAGCTCGAGACTGAATGC CACTCCTCCAAAAAGAAACTCGAGCATTACTTGAAGAAAGTAAGTGAGGAAAGGGCCTCATGGAGAACCAAAGAGCATGA GAAAATCCGTGCTTACATTGATGACATTAAAGCAGAGTTGAATCGAGAAAGGAAGAGCCGCCAGAGGATTGAAATTGTCA ACTCCAAGTTAGTTAATGAGTTAGCAGATGCTAAGTTATTTGCAAAGCGCTACATGAAAGATTATGAGAAGGAAAGGAAG GGCAGAGAATTGATTGAGGAAGTTTGTGATGAGCTTGCTAATGAAATTGGAGAAGACAAAGCTGAAGTTGAAGCATTGAA GAGGGAATCTATGAAACTTAGGGAAGAAATGGAAGAGGAGAGAAGGATGTTACAGATGGCTGAAGTATGGCGTGAAGAAC GTGTTCATATGAAGTTGATAGATGCAAAAATTGCTCTTGATGAGAAGTATTCACAGATGAATAAACTTGTAGCAGATTTG GAAACCTTTGTCAAGTCAACAGATGTGAACTCAAATGCAAAGGAGATGAGAGAGGCACAGTCACTTCAGCAGGCTGCAGC TGCTGTGAACATTCAAGACATCAAGGGATTTTCATACGAGCCACCCAATCCAGATGATATTTTTGCCATCTTTGAAGATG TAAATTCCGGTGAACCAAACGAGAGGGAGATTGAATCATGCATTGCTTACTCCCCAGCAAGTCAAGCCTCAAATATTCAT ATGGTTAGTCCTGAAGCCAACTTGATACGTAAGGCTAACTTGCAGAGACATTCTGATGTATTTATGGATGATAATGGTGA AGTAGAAGATGAAAGTGGATGGGAAACTGTAAGCCATGTCGAGGATCAAGGATCAAGTTGTTCACCAGAAGGGAGTACCC TTTCCATGACTAAGAATAGCCGGGTAAGTAACATTTCAGGGAGGAGTGTGCTTGAGTGGGAAGAAAATGCATGTGAAGCT ACACCTCTAACTGAAATTAGTGAAGTCTGTTCTGTACCGTCTAAGCAATCAAAGAAGGTATCATCCATAACAAGGCTTTG GAGGTCTGGCCAAGCCAATGGGGATAGTTACAAGATAATCTCCATGGACGGAATGAATGGGAGGCTTTCAAATGGAAGGG TATCTAATGGGGGCATCGTGTCTCCTGACTGGGGACCTGGTAAGGGTGGACTAAGCCCCCAAGACATTTTATGCCAGTTG AGTTCTCCGGAGTCGGGAAATCTGCATAATCGAGGCAAGAAAGGATGCATTCCTCGCACTGCACAGAAGAATAGTTTGAA AGCCAGACTTTTGGAGGCTAGGATGGAAACCCAGAAGTTTCAGTTGCGCCATGTTCTTAAACAGAAGATTTAGATGTGAA CCAAGGTAGAGATTGCTCACATGTGTAATTTAAGAATGATCCACCAGCTGCAGTTTGTTTTGAATAGTGGAAGTGCAAGT CTGCTGCTTCTAGAAAAAAACTGCTCAGAAATGATGAGGAGGGGTCATCAATAAATGCACTTTTTCCTGCCACGTTTCAG TTCTTCATTTTCACGCGTATTAAGCATTAAGCAGGTAAATAGCTAGCCTGCTATGTAATCCATCATGCTTCACTTTGTGT AGGATCTTATGAAAGTTATGAGAAGCATGTTGATTGTATTGTATCATTCTAAGTCCAGGGACCAAAATATGTAGTGAAAT CATATCATAAAAGTATAGATGATAACATTATCTTTTCCGCAGTTTGATTTTCTATCATAGTAGATGTGGCTTAGAATTTG TTATAGATTGTAGGAGTTCAGGAGGATGATTTCTGGTCCCAGGACAGAAAAATCATTACAGCTATTAAAATTCATATTTG AACGCTGGGACCACTTCCCTCTGTGTATCATTTTGTTCATTGGAATAATGAGGGCTGTTTCAACTATTTACTGAATATAA TGAAAATGAGATTACATT
CDS sequence (LotjaGi6g1v0167600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATCTCCAGCAACTCTAACTTACCACCGCCGCCATTCCCGGTGGGCATTGCTCACAACTCCCTGAACCCCTCGCC GGACTCGGATCTTCGACCGTACCGGAGAACATCCCGCCGGAAGCCCAGGACGCCGGCTACACGGTTGAGGAGAAGCGGGG CATCGGTAGGCAAACGGAGCAGGCCCGAAACCCCTTTGTCGAAGTGGAAGATCCATGAAGATAGAGAGAGGTGTGGCGCC GGCGGCGATCCGATCGAGGAGCCTGACAGTAGACCATGCCGGAAAAGGGAGCCGAAACAGCCGGTTGTTGTCTCGGCGAG GAAGCTCGCAGCTGGTCTGTGGCGGCTTCAGCTGCCGGAGGTTGCGGCGGGTGATCCTGGAAGACGAGTTGGTTCGAAGC TTCAGCATGAAGTTGGGCATGTAAACCATCCCTTTCTCAGTCATCAAAATGGCATGATGCATGGTTCCGCTATGAAGAAT CCATCACAAAGTCCTCGTTTCATTTCTGGGACAATGGTTTGTGAGCCTTCTTTACAGCTTTCTAATACGGCAATGGAAGG GGCAACGAAGTGGGATCCTGTTTGCTTTAAAACATCAGATGAGGTGCAGCATTTCTACAGCCAGATGAAATTCCTTGATC AAAAGGTCAGCACTGTTTCTGCTGCGTCTGCTCTTGAAGCTGAACTGGAGCAGGCTCGTGTACAGATTCAGGAGCTCGAG ACTGAATGCCACTCCTCCAAAAAGAAACTCGAGCATTACTTGAAGAAAGTAAGTGAGGAAAGGGCCTCATGGAGAACCAA AGAGCATGAGAAAATCCGTGCTTACATTGATGACATTAAAGCAGAGTTGAATCGAGAAAGGAAGAGCCGCCAGAGGATTG AAATTGTCAACTCCAAGTTAGTTAATGAGTTAGCAGATGCTAAGTTATTTGCAAAGCGCTACATGAAAGATTATGAGAAG GAAAGGAAGGGCAGAGAATTGATTGAGGAAGTTTGTGATGAGCTTGCTAATGAAATTGGAGAAGACAAAGCTGAAGTTGA AGCATTGAAGAGGGAATCTATGAAACTTAGGGAAGAAATGGAAGAGGAGAGAAGGATGTTACAGATGGCTGAAGTATGGC GTGAAGAACGTGTTCATATGAAGTTGATAGATGCAAAAATTGCTCTTGATGAGAAGTATTCACAGATGAATAAACTTGTA GCAGATTTGGAAACCTTTGTCAAGTCAACAGATGTGAACTCAAATGCAAAGGAGATGAGAGAGGCACAGTCACTTCAGCA GGCTGCAGCTGCTGTGAACATTCAAGACATCAAGGGATTTTCATACGAGCCACCCAATCCAGATGATATTTTTGCCATCT TTGAAGATGTAAATTCCGGTGAACCAAACGAGAGGGAGATTGAATCATGCATTGCTTACTCCCCAGCAAGTCAAGCCTCA AATATTCATATGGTTAGTCCTGAAGCCAACTTGATACGTAAGGCTAACTTGCAGAGACATTCTGATGTATTTATGGATGA TAATGGTGAAGTAGAAGATGAAAGTGGATGGGAAACTGTAAGCCATGTCGAGGATCAAGGATCAAGTTGTTCACCAGAAG GGAGTACCCTTTCCATGACTAAGAATAGCCGGGTAAGTAACATTTCAGGGAGGAGTGTGCTTGAGTGGGAAGAAAATGCA TGTGAAGCTACACCTCTAACTGAAATTAGTGAAGTCTGTTCTGTACCGTCTAAGCAATCAAAGAAGGTATCATCCATAAC AAGGCTTTGGAGGTCTGGCCAAGCCAATGGGGATAGTTACAAGATAATCTCCATGGACGGAATGAATGGGAGGCTTTCAA ATGGAAGGGTATCTAATGGGGGCATCGTGTCTCCTGACTGGGGACCTGGTAAGGGTGGACTAAGCCCCCAAGACATTTTA TGCCAGTTGAGTTCTCCGGAGTCGGGAAATCTGCATAATCGAGGCAAGAAAGGATGCATTCCTCGCACTGCACAGAAGAA TAGTTTGAAAGCCAGACTTTTGGAGGCTAGGATGGAAACCCAGAAGTTTCAGTTGCGCCATGTTCTTAAACAGAAGATTT AG
Protein sequence (LotjaGi6g1v0167600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKISSNSNLPPPPFPVGIAHNSLNPSPDSDLRPYRRTSRRKPRTPATRLRRSGASVGKRSRPETPLSKWKIHEDRERCGA GGDPIEEPDSRPCRKREPKQPVVVSARKLAAGLWRLQLPEVAAGDPGRRVGSKLQHEVGHVNHPFLSHQNGMMHGSAMKN PSQSPRFISGTMVCEPSLQLSNTAMEGATKWDPVCFKTSDEVQHFYSQMKFLDQKVSTVSAASALEAELEQARVQIQELE TECHSSKKKLEHYLKKVSEERASWRTKEHEKIRAYIDDIKAELNRERKSRQRIEIVNSKLVNELADAKLFAKRYMKDYEK ERKGRELIEEVCDELANEIGEDKAEVEALKRESMKLREEMEEERRMLQMAEVWREERVHMKLIDAKIALDEKYSQMNKLV ADLETFVKSTDVNSNAKEMREAQSLQQAAAAVNIQDIKGFSYEPPNPDDIFAIFEDVNSGEPNEREIESCIAYSPASQAS NIHMVSPEANLIRKANLQRHSDVFMDDNGEVEDESGWETVSHVEDQGSSCSPEGSTLSMTKNSRVSNISGRSVLEWEENA CEATPLTEISEVCSVPSKQSKKVSSITRLWRSGQANGDSYKIISMDGMNGRLSNGRVSNGGIVSPDWGPGKGGLSPQDIL CQLSSPESGNLHNRGKKGCIPRTAQKNSLKARLLEARMETQKFQLRHVLKQKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 99 | 99 | - | – | |
| PANTHER | 14 | 693 | 680 | 0.0 | – | |
| PANTHER | 14 | 693 | 680 | 0.0 | ||
| MobiDBLite | 63 | 99 | 37 | - | – | |
| Coils | 222 | 256 | 35 | - | – | |
| Coils | 332 | 366 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0167600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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