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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0170000 |
| Transcript ID | LotjaGi6g1v0170000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione s-transferase, putative; TAIR: AT1G10360.1 glutathione S-transferase TAU 18; Swiss-Prot: sp|Q9FUS9|GSTUI_ARATH Glutathione S-transferase U18; TrEMBL-Plants: tr|I3SB06|I3SB06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0170000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45572144..45574478) extracted from Lotus japonicus Gifu genome v1.2.
AAATAATCAGTGTCAAAACCGTAAATAACTTGAAAACCCAGTGGTAAAATGGCAAACACGCGTTTCACCCACTATATAAA TTCCCTTCATGGCTAAGGAAATCAAGAGAGTCTCCGGTAAAGGATCAGTTAATACGACGGCCGCGCCTCCTTCCGCCTGC TGTTCCGGTCGCCGGATTTCTTTCCGGACGGTGGTCCTGGTTCTCGGGATCGTGTTGCCGTTTCTCTTCATTTGGTAATA ATTTGACTAATTTCCATTTTCGGAAATTATTCTTGACTGTTGCATAATTGATGATGAGAGTTTACTTGTTTTAAGCAATG AACTTTTTTGTTGCTGATAAAAAGTCGTATACCTTAATTTTATCAAATACAGTGGTGATCGACAATGGCAAACAGTGAGC TGAAGCTTCTTGGTAAATGGTCGAGTCCTTATGTGATTAGGGTGAAGATTGCCCTCAGAATCAAATCCCTTGAATATGAA AACCTTGAAGAGCACGAAACATTCTCCCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTGTTTATGCCAAAGTCCCTGT TCTCATCCACCATGGTAAACCCATCTGTGAGTCTATGCTTATAGTTCAATACATAGATGAAACTTGGTCCACTACCCCTT CTATTCTCCCCTCTGATGCTTATGATCGAGCACTTGCTAGGTTTTGGGTTGCTTACATAGATGATAAGGTAACTTCTTAT TTTCTTTGTATTAATTTAGCATCAATTTATTTTACTGAATTTATAAACTAAATTTTAATTTGAAGATTGATTTGAGTTAA AATGATTTGATTTATGTTTGATTACCTTTATGGAAAAGTTGAGGTTTCTATGGTTTATGAAATTCACTTGTCAAATTATT TTACTTAATTTAGAAACTAAATTTTAATTTGAAGATTGATTTCCGTTTGAAGTTCATTGACATCGAAAATGAGATGAGAA TTTATTGTTTAAATTAGCGTTAGCAGTGTTCATTCTGGACACAATTGATTCTGCTACATTAGGTACGCTAAACATGCGTT AAAATGATTTGATTTATGTTTGAGTATCTTTATGGAAAAGTTGAGGTTTCTATGGTATGTTATGAAATTCACTTGTCAAA TATTAGAATTGATTATGTTTAACGCATAAACAAGTATTATTTGTTCCGACAAGTAGACTTGATTTTGTAGAATTGATTCT AATTTACTGGTACACGCGTAGAATTGATTTTGACAAAGTAGAATTGATCCTAAAGAATTGATTTTGGTTTTGAAACATGC TCTAGTGGTTTCCTACGATAGAAACCATTGTAACTGTTGATGAGGAAGAAAGGAAGCCATATTATGATATATTGGATACA GTGCTTGAAAATATGGAGGATGCTTTTGTCAAATGCAGTAAAGGAAAGGCCTTTTTCGGTGGAGATAAAATTGGGTACCT TGATATTGCTTTTGGGAGCTTCCTGGGGTGGCTCAGTGCCATAGAACAAGAGTATCAAAGGAAAGTTCTGGTTGAATCAA AGGCTCCAGCTTTGGTTAAATGGGCTGAAAGGTTTGTTGCTGACCCTGCTGTCAAGGGGATTATACCTGAGACTGACAGG GTTGTTAAGCTTTCTAGGGCTTTTCGGATCAAATGGAGAGCTGAACTTGGTAAGAAATAGAATTTATGAGTGCAAGTGAT CGATCTTGTTGTATCATGAATAAGATGAAAAAATAAAAGTGATCCTCTTGTGGTATGTGTTTGTTTCCCTTGCAGTTGCC TTAATTTTCTTTTCTTCTCTCTTTTGTTCCTTTGGTCTGTACTCTCATTTGTAACAAGAGGAAAATGAGTGTGTTGCTGC TAATTTCTTTTTCTAATAATAGTTCCATTACCATATATATCAAGTTAATGGTTCGCTTTGATGTTCTAGTGTCACGTAAT TTGATTGCATTTCTAACTCAAACTATGGGAATCCTAATCCAGCAACATTACACAAATAGAGAACACTTTTTTAAAGACTT TGCTTTTTTTTTTTTTATAAGCAAAACTGTATTAAATAATAGAGTACAAGGGGTACTCCACCCAAATAATACAAGAGAGT CACAGCAAAGAAAGAAAAAAATTAAACCCAGACAAGGGACAAAACAGAACCACCAAATGAAATGGTTACAAACTAACAAT AAAGCTTGACTACACAATCTTAAGCAAACCCAACGTGCTGGCACTAACACCCACCAAGCCAACATCAAAACCAAGTTTTC CACATAATAGACATCCACCACGCACCATACACAATTATGCACCCAAGGCCACCACGCACCAATCTCCCACTAACAGTATT GAATACACAACATGG
CDS sequence (LotjaGi6g1v0170000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACAGTGAGCTGAAGCTTCTTGGTAAATGGTCGAGTCCTTATGTGATTAGGGTGAAGATTGCCCTCAGAATCAA ATCCCTTGAATATGAAAACCTTGAAGAGCACGAAACATTCTCCCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTGTTT ATGCCAAAGTCCCTGTTCTCATCCACCATGGTAAACCCATCTGTGAGTCTATGCTTATAGTTCAATACATAGATGAAACT TGGTCCACTACCCCTTCTATTCTCCCCTCTGATGCTTATGATCGAGCACTTGCTAGGTTTTGGGTTGCTTACATAGATGA TAAGTGGTTTCCTACGATAGAAACCATTGTAACTGTTGATGAGGAAGAAAGGAAGCCATATTATGATATATTGGATACAG TGCTTGAAAATATGGAGGATGCTTTTGTCAAATGCAGTAAAGGAAAGGCCTTTTTCGGTGGAGATAAAATTGGGTACCTT GATATTGCTTTTGGGAGCTTCCTGGGGTGGCTCAGTGCCATAGAACAAGAGTATCAAAGGAAAGTTCTGGTTGAATCAAA GGCTCCAGCTTTGGTTAAATGGGCTGAAAGGTTTGTTGCTGACCCTGCTGTCAAGGGGATTATACCTGAGACTGACAGGG TTGTTAAGCTTTCTAGGGCTTTTCGGATCAAATGGAGAGCTGAACTTGGTAAGAAATAG
Protein sequence (LotjaGi6g1v0170000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANSELKLLGKWSSPYVIRVKIALRIKSLEYENLEEHETFSPKSDLLLQSNPVYAKVPVLIHHGKPICESMLIVQYIDET WSTTPSILPSDAYDRALARFWVAYIDDKWFPTIETIVTVDEEERKPYYDILDTVLENMEDAFVKCSKGKAFFGGDKIGYL DIAFGSFLGWLSAIEQEYQRKVLVESKAPALVKWAERFVADPAVKGIIPETDRVVKLSRAFRIKWRAELGKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 88 | 88 | 2.2E-33 | ||
| SFLD | 2 | 227 | 226 | 0.0 | ||
| PANTHER | 2 | 224 | 223 | 6.1E-94 | – | |
| PANTHER | 2 | 224 | 223 | 6.1E-94 | – | |
| SFLD | 2 | 227 | 226 | 0.0 | – | |
| ProSiteProfiles | 4 | 85 | 82 | 17.409 | ||
| Pfam | 5 | 79 | 75 | 1.7E-16 | ||
| CDD | 6 | 81 | 76 | 1.30862E-39 | – | |
| SUPERFAMILY | 6 | 110 | 105 | 6.73E-23 | ||
| SUPERFAMILY | 87 | 219 | 133 | 4.32E-34 | ||
| Gene3D | 89 | 228 | 140 | 2.8E-48 | – | |
| ProSiteProfiles | 91 | 227 | 137 | 17.452 | ||
| CDD | 92 | 221 | 130 | 1.39968E-44 | – | |
| Pfam | 103 | 202 | 100 | 4.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0170000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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