Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0170600 |
| Transcript ID | LotjaGi6g1v0170600.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT2G04865.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|F4IFD0|MAIL2_ARATH Protein MAIN-LIKE 2; TrEMBL-Plants: tr|V7BK89|V7BK89_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0170600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45726604..45729269) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGTGGTAGCAGTGGACCCTTACACAACTAATCCAGGTCCAATTGATGGTTCAGTTCTTTATGATCAAGACAAGCA TGTCTCCACAGCAGTTTGGGAGGGACAGGTGCAGTTTGATAGCTGACAAGACTATCTGCTTCATCTCTTATTTCATTTTC TTTTCAGAAAGTCATCAATAGCTTGGTTACTTATAGTTTTATATAATTGTTCTCTGATTAATGCATTAGCAGGAGCGTGG CGCCCTGAGATGTCACGAACACACTTCAAAGCTTGATCAGTGGACACTTACACCTAAACAGATTGAATTGGTAGAGAGAG CTGGATTTGGATACTTAAGGTCAATTCCAGCTATTAGTCTAGACAATCCACTTATCTCTGCTCTAGTTGAAAGATGGAGA AGAGAAACAAATACTTTTCACTTGAACGTTGGTGAAATGACGGTAACTCTTAAAGATGTTGCCCTCTTACTTGGGCTGGC AATTGATGGAGAACCTGTAATAGGTATTACATATACCGCATGCAGTTCAGTTTGTGAAAGGTATCTTGGCAGAACCCCTG AATCTGGTTACACAAGTGGCGGAATGGTGAAGTTAAGTTGGTTGAAAGAGTTCTTTTCTCGCTGTCCTGAAGATGCTCCA TTTGAAGTGATAGAGCAACATACTCGAGCCTATCTTCTTTACCTTGTAGGTAGCACCATATTCTCCACCACTACAGGGAA TAAGGTCCCTGTAATGTATTTGCCATTATTTGAGAATTTTGATAGATGTGGACAATATGCCTGGGGTGCAGCAACGTTGG GATTCTTGTATAGAGCACTGGGAAATGCCTCACTAAAAACTCAAAGCACCATTAGTGGCTGTTTAACTCTACTGCAGGTG TTGTAAATGTGCTTTCCTGCTTTATCCTTTTCTTTCAAACTGCAGTTTACTTTATTCGAGGTTTTGATTAATGGTTTTTT TTTGTGGTAAGCTCTGATTAATGGATTATTATGCATTTGCAGTGTTGGAGTTACTTTCACCTAAATATTGGGCGACCAAA GCTCAATCTTGATATGATTCATGATCGATTTCCATTTGTCGTTAGATGGAAAGGAAAACAAAGTGGCCCGACTGCAAACC GTGATGTAGTATTTTATCGGAAGGCTTTGGATTCCCTAAAACCATGTGAAGTAAGTCTTATTGTCATTTCTATGTTTAAT TAATGCTTATCTGGTAGTATTCTCTATACATTTTTTAAAAATAAGATAGTGTTAATCTACAGGTGGAGTGGCTCCCTTAC CGGAACATGGATAGTATGGTTATTCCAGAACATATCAAAAGCACTTTAATTCTTGGAAGGTCAAAGACAATGTTGATATG CTTTGACAAGGCAGAAAGACATCTTCCAAATCGATGCTTAAGGCAATATGGCATGCTTCAATCAATCCCGGATGATGTGG AGCGTTGGGAGAGAAAGAGTAGAGGAGTTGATGGCGGGGTTGATTTGTCTGGGAAAATGGAATCAGAGCTCAATGAATGG ATGGACCGCCAATTGCATATTGTTGATGGGGATGAGAGTGTAGATGAAAGTGAGTACATGGAGTGGTATCTGAGAATTAC TCGCAAGTTCATAGGGAGGCCTATTTCTCTGTCATCCGAGTTTCAGAGAACGGTAAGGATATGTTTCATGAATTTAGGTT TTGTATCTTATAGCTATTATAGATTAAGTTTAAAATGCTTTTTAAAGAATATAAACAAATGTTTTCAGAATGCTGGTCTG AGGGATATTGCACACATAGCAGATACCTTTTCAACAAAAGGGCTAGATCCACAACAAATTGATTCAATATCTAGGATCAG ATATATTGCCCATGAATGTTTGAGAGACCAAATCGGCGGTCCAGTCATCGCATCAGCCAGCCCCGAAGTTGAAATCGGAA AAAGGGTAAGAGGAAAAGAGAGGGTTAGAAGAAGAGGGGCAGGTAAGCGAATGCGGAAGGATGGCGCAGTTCAATATAAC GCTGTTAGTGAGGATGACCAACCTCAGTACTATGGCACTGCGATTGATATTGATCAATTACATCTACCTCATATTGATAG GGAGCTGGATCACGCCCAATTATGTAATGTGGACAGCGCAGATCTGATTCATGCAGACGATGATGCTGAGAATCTGCACC TCTGTGTTGATCAATCAGACCTAGGCTATGCATCTGTTGAAGAAAATAACGCAGAGTCAGATGATGTAGCTGCTCAGTTT AACCATGAAGAACTGAAGCGCGAAGCTGATGAGGCCATCAAGGAAGAGTTTAACCATGTGACTGGTGAGGAAAATATTGA GCATCTGAATGCAGCCAATGATATTCATGATGCACAACATTGCGATCCTATGATGATTGATAATTCACTGCTTTGTGATG CAAGTCATGAGATCAACAACACGACGATGCTTTCAGATGTTTCTGCAGAGATCAATCACGCACAACTTGGCGATGATGCA AATGAGATCAACCCACTGCAAATGAATCCAGCTGACAATCATGTTAATTCTCCACTTTCCCACATTAACACTGAAAGTGA ATCACCATCTTCTGCTGCTATAGCAGCAATAGAAGTGTCTCAACATTCTTCTATTGAAACTCATGAGGATATTTCACAGA ATGGTGATTGTAGTGTTGCTGTATAG
CDS sequence (LotjaGi6g1v0170600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTGGTAGCAGTGGACCCTTACACAACTAATCCAGGTCCAATTGATGGTTCAGTTCTTTATGATCAAGACAAGCA TGTCTCCACAGCAGTTTGGGAGGGACAGCAGGAGCGTGGCGCCCTGAGATGTCACGAACACACTTCAAAGCTTGATCAGT GGACACTTACACCTAAACAGATTGAATTGGTAGAGAGAGCTGGATTTGGATACTTAAGGTCAATTCCAGCTATTAGTCTA GACAATCCACTTATCTCTGCTCTAGTTGAAAGATGGAGAAGAGAAACAAATACTTTTCACTTGAACGTTGGTGAAATGAC GGTAACTCTTAAAGATGTTGCCCTCTTACTTGGGCTGGCAATTGATGGAGAACCTGTAATAGGTATTACATATACCGCAT GCAGTTCAGTTTGTGAAAGGTATCTTGGCAGAACCCCTGAATCTGGTTACACAAGTGGCGGAATGGTGAAGTTAAGTTGG TTGAAAGAGTTCTTTTCTCGCTGTCCTGAAGATGCTCCATTTGAAGTGATAGAGCAACATACTCGAGCCTATCTTCTTTA CCTTGTAGGTAGCACCATATTCTCCACCACTACAGGGAATAAGGTCCCTGTAATGTATTTGCCATTATTTGAGAATTTTG ATAGATGTGGACAATATGCCTGGGGTGCAGCAACGTTGGGATTCTTGTATAGAGCACTGGGAAATGCCTCACTAAAAACT CAAAGCACCATTAGTGGCTGTTTAACTCTACTGCAGTGTTGGAGTTACTTTCACCTAAATATTGGGCGACCAAAGCTCAA TCTTGATATGATTCATGATCGATTTCCATTTGTCGTTAGATGGAAAGGAAAACAAAGTGGCCCGACTGCAAACCGTGATG TAGTATTTTATCGGAAGGCTTTGGATTCCCTAAAACCATGTGAAGTGGAGTGGCTCCCTTACCGGAACATGGATAGTATG GTTATTCCAGAACATATCAAAAGCACTTTAATTCTTGGAAGGTCAAAGACAATGTTGATATGCTTTGACAAGGCAGAAAG ACATCTTCCAAATCGATGCTTAAGGCAATATGGCATGCTTCAATCAATCCCGGATGATGTGGAGCGTTGGGAGAGAAAGA GTAGAGGAGTTGATGGCGGGGTTGATTTGTCTGGGAAAATGGAATCAGAGCTCAATGAATGGATGGACCGCCAATTGCAT ATTGTTGATGGGGATGAGAGTGTAGATGAAAGTGAGTACATGGAGTGGTATCTGAGAATTACTCGCAAGTTCATAGGGAG GCCTATTTCTCTGTCATCCGAGTTTCAGAGAACGAATGCTGGTCTGAGGGATATTGCACACATAGCAGATACCTTTTCAA CAAAAGGGCTAGATCCACAACAAATTGATTCAATATCTAGGATCAGATATATTGCCCATGAATGTTTGAGAGACCAAATC GGCGGTCCAGTCATCGCATCAGCCAGCCCCGAAGTTGAAATCGGAAAAAGGGTAAGAGGAAAAGAGAGGGTTAGAAGAAG AGGGGCAGGTAAGCGAATGCGGAAGGATGGCGCAGTTCAATATAACGCTGTTAGTGAGGATGACCAACCTCAGTACTATG GCACTGCGATTGATATTGATCAATTACATCTACCTCATATTGATAGGGAGCTGGATCACGCCCAATTATGTAATGTGGAC AGCGCAGATCTGATTCATGCAGACGATGATGCTGAGAATCTGCACCTCTGTGTTGATCAATCAGACCTAGGCTATGCATC TGTTGAAGAAAATAACGCAGAGTCAGATGATGTAGCTGCTCAGTTTAACCATGAAGAACTGAAGCGCGAAGCTGATGAGG CCATCAAGGAAGAGTTTAACCATGTGACTGGTGAGGAAAATATTGAGCATCTGAATGCAGCCAATGATATTCATGATGCA CAACATTGCGATCCTATGATGATTGATAATTCACTGCTTTGTGATGCAAGTCATGAGATCAACAACACGACGATGCTTTC AGATGTTTCTGCAGAGATCAATCACGCACAACTTGGCGATGATGCAAATGAGATCAACCCACTGCAAATGAATCCAGCTG ACAATCATGTTAATTCTCCACTTTCCCACATTAACACTGAAAGTGAATCACCATCTTCTGCTGCTATAGCAGCAATAGAA GTGTCTCAACATTCTTCTATTGAAACTCATGAGGATATTTCACAGAATGGTGATTGTAGTGTTGCTGTATAG
Protein sequence (LotjaGi6g1v0170600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVVAVDPYTTNPGPIDGSVLYDQDKHVSTAVWEGQQERGALRCHEHTSKLDQWTLTPKQIELVERAGFGYLRSIPAISL DNPLISALVERWRRETNTFHLNVGEMTVTLKDVALLLGLAIDGEPVIGITYTACSSVCERYLGRTPESGYTSGGMVKLSW LKEFFSRCPEDAPFEVIEQHTRAYLLYLVGSTIFSTTTGNKVPVMYLPLFENFDRCGQYAWGAATLGFLYRALGNASLKT QSTISGCLTLLQCWSYFHLNIGRPKLNLDMIHDRFPFVVRWKGKQSGPTANRDVVFYRKALDSLKPCEVEWLPYRNMDSM VIPEHIKSTLILGRSKTMLICFDKAERHLPNRCLRQYGMLQSIPDDVERWERKSRGVDGGVDLSGKMESELNEWMDRQLH IVDGDESVDESEYMEWYLRITRKFIGRPISLSSEFQRTNAGLRDIAHIADTFSTKGLDPQQIDSISRIRYIAHECLRDQI GGPVIASASPEVEIGKRVRGKERVRRRGAGKRMRKDGAVQYNAVSEDDQPQYYGTAIDIDQLHLPHIDRELDHAQLCNVD SADLIHADDDAENLHLCVDQSDLGYASVEENNAESDDVAAQFNHEELKREADEAIKEEFNHVTGEENIEHLNAANDIHDA QHCDPMMIDNSLLCDASHEINNTTMLSDVSAEINHAQLGDDANEINPLQMNPADNHVNSPLSHINTESESPSSAAIAAIE VSQHSSIETHEDISQNGDCSVAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 483 | 472 | 2.1E-212 | – | |
| PANTHER | 12 | 483 | 472 | 2.1E-212 | – | |
| Pfam | 69 | 417 | 349 | 9.6E-104 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0170600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…