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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0170600 |
| Transcript ID | LotjaGi6g1v0170600.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT2G04865.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|F4IFD0|MAIL2_ARATH Protein MAIN-LIKE 2; TrEMBL-Plants: tr|A0A0S3S805|A0A0S3S805_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0170600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45726604..45729269) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGTGGTAGCAGTGGACCCTTACACAACTAATCCAGGTCCAATTGATGGTTCAGTTCTTTATGATCAAGACAAGCA TGTCTCCACAGCAGTTTGGGAGGGACAGGTGCAGTTTGATAGCTGACAAGACTATCTGCTTCATCTCTTATTTCATTTTC TTTTCAGAAAGTCATCAATAGCTTGGTTACTTATAGTTTTATATAATTGTTCTCTGATTAATGCATTAGCAGGAGCGTGG CGCCCTGAGATGTCACGAACACACTTCAAAGCTTGATCAGTGGACACTTACACCTAAACAGATTGAATTGGTAGAGAGAG CTGGATTTGGATACTTAAGGTCAATTCCAGCTATTAGTCTAGACAATCCACTTATCTCTGCTCTAGTTGAAAGATGGAGA AGAGAAACAAATACTTTTCACTTGAACGTTGGTGAAATGACGGTAACTCTTAAAGATGTTGCCCTCTTACTTGGGCTGGC AATTGATGGAGAACCTGTAATAGGTATTACATATACCGCATGCAGTTCAGTTTGTGAAAGGTATCTTGGCAGAACCCCTG AATCTGGTTACACAAGTGGCGGAATGGTGAAGTTAAGTTGGTTGAAAGAGTTCTTTTCTCGCTGTCCTGAAGATGCTCCA TTTGAAGTGATAGAGCAACATACTCGAGCCTATCTTCTTTACCTTGTAGGTAGCACCATATTCTCCACCACTACAGGGAA TAAGGTCCCTGTAATGTATTTGCCATTATTTGAGAATTTTGATAGATGTGGACAATATGCCTGGGGTGCAGCAACGTTGG GATTCTTGTATAGAGCACTGGGAAATGCCTCACTAAAAACTCAAAGCACCATTAGTGGCTGTTTAACTCTACTGCAGGTG TTGTAAATGTGCTTTCCTGCTTTATCCTTTTCTTTCAAACTGCAGTTTACTTTATTCGAGGTTTTGATTAATGGTTTTTT TTTGTGGTAAGCTCTGATTAATGGATTATTATGCATTTGCAGTGTTGGAGTTACTTTCACCTAAATATTGGGCGACCAAA GCTCAATCTTGATATGATTCATGATCGATTTCCATTTGTCGTTAGATGGAAAGGAAAACAAAGTGGCCCGACTGCAAACC GTGATGTAGTATTTTATCGGAAGGCTTTGGATTCCCTAAAACCATGTGAAGTAAGTCTTATTGTCATTTCTATGTTTAAT TAATGCTTATCTGGTAGTATTCTCTATACATTTTTTAAAAATAAGATAGTGTTAATCTACAGGTGGAGTGGCTCCCTTAC CGGAACATGGATAGTATGGTTATTCCAGAACATATCAAAAGCACTTTAATTCTTGGAAGGTCAAAGACAATGTTGATATG CTTTGACAAGGCAGAAAGACATCTTCCAAATCGATGCTTAAGGCAATATGGCATGCTTCAATCAATCCCGGATGATGTGG AGCGTTGGGAGAGAAAGAGTAGAGGAGTTGATGGCGGGGTTGATTTGTCTGGGAAAATGGAATCAGAGCTCAATGAATGG ATGGACCGCCAATTGCATATTGTTGATGGGGATGAGAGTGTAGATGAAAGTGAGTACATGGAGTGGTATCTGAGAATTAC TCGCAAGTTCATAGGGAGGCCTATTTCTCTGTCATCCGAGTTTCAGAGAACGGTAAGGATATGTTTCATGAATTTAGGTT TTGTATCTTATAGCTATTATAGATTAAGTTTAAAATGCTTTTTAAAGAATATAAACAAATGTTTTCAGAATGCTGGTCTG AGGGATATTGCACACATAGCAGATACCTTTTCAACAAAAGGGCTAGATCCACAACAAATTGATTCAATATCTAGGATCAG ATATATTGCCCATGAATGTTTGAGAGACCAAATCGGCGGTCCAGTCATCGCATCAGCCAGCCCCGAAGTTGAAATCGGAA AAAGGGTAAGAGGAAAAGAGAGGGTTAGAAGAAGAGGGGCAGGTAAGCGAATGCGGAAGGATGGCGCAGTTCAATATAAC GCTGTTAGTGAGGATGACCAACCTCAGTACTATGGCACTGCGATTGATATTGATCAATTACATCTACCTCATATTGATAG GGAGCTGGATCACGCCCAATTATGTAATGTGGACAGCGCAGATCTGATTCATGCAGACGATGATGCTGAGAATCTGCACC TCTGTGTTGATCAATCAGACCTAGGCTATGCATCTGTTGAAGAAAATAACGCAGAGTCAGATGATGTAGCTGCTCAGTTT AACCATGAAGAACTGAAGCGCGAAGCTGATGAGGCCATCAAGGAAGAGTTTAACCATGTGACTGGTGAGGAAAATATTGA GCATCTGAATGCAGCCAATGATATTCATGATGCACAACATTGCGATCCTATGATGATTGATAATTCACTGCTTTGTGATG CAAGTCATGAGATCAACAACACGACGATGCTTTCAGATGTTTCTGCAGAGATCAATCACGCACAACTTGGCGATGATGCA AATGAGATCAACCCACTGCAAATGAATCCAGCTGACAATCATGTTAATTCTCCACTTTCCCACATTAACACTGAAAGTGA ATCACCATCTTCTGCTGCTATAGCAGCAATAGAAGTGTCTCAACATTCTTCTATTGAAACTCATGAGGATATTTCACAGA ATGGTGATTGTAGTGTTGCTGTATAG
CDS sequence (LotjaGi6g1v0170600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTGGTAGCAGTGGACCCTTACACAACTAATCCAGGTCCAATTGATGGTTCAGTTCTTTATGATCAAGACAAGCA TGTCTCCACAGCAGTTTGGGAGGGACAGCAGGAGCGTGGCGCCCTGAGATGTCACGAACACACTTCAAAGCTTGATCAGT GGACACTTACACCTAAACAGATTGAATTGGTAGAGAGAGCTGGATTTGGATACTTAAGGTCAATTCCAGCTATTAGTCTA GACAATCCACTTATCTCTGCTCTAGTTGAAAGATGGAGAAGAGAAACAAATACTTTTCACTTGAACGTTGGTGAAATGAC GGTAACTCTTAAAGATGTTGCCCTCTTACTTGGGCTGGCAATTGATGGAGAACCTGTAATAGGTATTACATATACCGCAT GCAGTTCAGTTTGTGAAAGGTATCTTGGCAGAACCCCTGAATCTGGTTACACAAGTGGCGGAATGGTGAAGTTAAGTTGG TTGAAAGAGTTCTTTTCTCGCTGTCCTGAAGATGCTCCATTTGAAGTGATAGAGCAACATACTCGAGCCTATCTTCTTTA CCTTGTAGGTAGCACCATATTCTCCACCACTACAGGGAATAAGGTCCCTGTAATGTATTTGCCATTATTTGAGAATTTTG ATAGATGTGGACAATATGCCTGGGGTGCAGCAACGTTGGGATTCTTGTATAGAGCACTGGGAAATGCCTCACTAAAAACT CAAAGCACCATTAGTGGCTGTTTAACTCTACTGCAGTGTTGGAGTTACTTTCACCTAAATATTGGGCGACCAAAGCTCAA TCTTGATATGATTCATGATCGATTTCCATTTGTCGTTAGATGGAAAGGAAAACAAAGTGGCCCGACTGCAAACCGTGATG TAGTATTTTATCGGAAGGCTTTGGATTCCCTAAAACCATGTGAAGTGGAGTGGCTCCCTTACCGGAACATGGATAGTATG GTTATTCCAGAACATATCAAAAGCACTTTAATTCTTGGAAGGTCAAAGACAATGTTGATATGCTTTGACAAGGCAGAAAG ACATCTTCCAAATCGATGCTTAAGGCAATATGGCATGCTTCAATCAATCCCGGATGATGTGGAGCGTTGGGAGAGAAAGA GTAGAGGAGTTGATGGCGGGGTTGATTTGTCTGGGAAAATGGAATCAGAGCTCAATGAATGGATGGACCGCCAATTGCAT ATTGTTGATGGGGATGAGAGTGTAGATGAAAGTGAGTACATGGAGTGGTATCTGAGAATTACTCGCAAGTTCATAGGGAG GCCTATTTCTCTGTCATCCGAGTTTCAGAGAACGAATATAAACAAATGTTTTCAGAATGCTGGTCTGAGGGATATTGCAC ACATAGCAGATACCTTTTCAACAAAAGGGCTAGATCCACAACAAATTGATTCAATATCTAGGATCAGATATATTGCCCAT GAATGTTTGAGAGACCAAATCGGCGGTCCAGTCATCGCATCAGCCAGCCCCGAAGTTGAAATCGGAAAAAGGGTAAGAGG AAAAGAGAGGGTTAGAAGAAGAGGGGCAGGTAAGCGAATGCGGAAGGATGGCGCAGTTCAATATAACGCTGTTAGTGAGG ATGACCAACCTCAGTACTATGGCACTGCGATTGATATTGATCAATTACATCTACCTCATATTGATAGGGAGCTGGATCAC GCCCAATTATGTAATGTGGACAGCGCAGATCTGATTCATGCAGACGATGATGCTGAGAATCTGCACCTCTGTGTTGATCA ATCAGACCTAGGCTATGCATCTGTTGAAGAAAATAACGCAGAGTCAGATGATGTAGCTGCTCAGTTTAACCATGAAGAAC TGAAGCGCGAAGCTGATGAGGCCATCAAGGAAGAGTTTAACCATGTGACTGGTGAGGAAAATATTGAGCATCTGAATGCA GCCAATGATATTCATGATGCACAACATTGCGATCCTATGATGATTGATAATTCACTGCTTTGTGATGCAAGTCATGAGAT CAACAACACGACGATGCTTTCAGATGTTTCTGCAGAGATCAATCACGCACAACTTGGCGATGATGCAAATGAGATCAACC CACTGCAAATGAATCCAGCTGACAATCATGTTAATTCTCCACTTTCCCACATTAACACTGAAAGTGAATCACCATCTTCT GCTGCTATAGCAGCAATAGAAGTGTCTCAACATTCTTCTATTGAAACTCATGAGGATATTTCACAGAATGGTGATTGTAG TGTTGCTGTATAG
Protein sequence (LotjaGi6g1v0170600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVVAVDPYTTNPGPIDGSVLYDQDKHVSTAVWEGQQERGALRCHEHTSKLDQWTLTPKQIELVERAGFGYLRSIPAISL DNPLISALVERWRRETNTFHLNVGEMTVTLKDVALLLGLAIDGEPVIGITYTACSSVCERYLGRTPESGYTSGGMVKLSW LKEFFSRCPEDAPFEVIEQHTRAYLLYLVGSTIFSTTTGNKVPVMYLPLFENFDRCGQYAWGAATLGFLYRALGNASLKT QSTISGCLTLLQCWSYFHLNIGRPKLNLDMIHDRFPFVVRWKGKQSGPTANRDVVFYRKALDSLKPCEVEWLPYRNMDSM VIPEHIKSTLILGRSKTMLICFDKAERHLPNRCLRQYGMLQSIPDDVERWERKSRGVDGGVDLSGKMESELNEWMDRQLH IVDGDESVDESEYMEWYLRITRKFIGRPISLSSEFQRTNINKCFQNAGLRDIAHIADTFSTKGLDPQQIDSISRIRYIAH ECLRDQIGGPVIASASPEVEIGKRVRGKERVRRRGAGKRMRKDGAVQYNAVSEDDQPQYYGTAIDIDQLHLPHIDRELDH AQLCNVDSADLIHADDDAENLHLCVDQSDLGYASVEENNAESDDVAAQFNHEELKREADEAIKEEFNHVTGEENIEHLNA ANDIHDAQHCDPMMIDNSLLCDASHEINNTTMLSDVSAEINHAQLGDDANEINPLQMNPADNHVNSPLSHINTESESPSS AAIAAIEVSQHSSIETHEDISQNGDCSVAV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 490 | 479 | 5.0E-209 | – | |
| PANTHER | 12 | 490 | 479 | 5.0E-209 | – | |
| Pfam | 69 | 417 | 349 | 9.8E-104 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0170600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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