Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0174500 |
| Transcript ID | LotjaGi6g1v0174500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-hydroxyisobutyryl-CoA hydrolase-like protein; TAIR: AT1G06550.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5; TrEMBL-Plants: tr|I3SVG7|I3SVG7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0174500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:46478942..46484487) extracted from Lotus japonicus Gifu genome v1.2.
AATATGATTAGAGTCTCTTGTAAAACTTGTTGATCTCTAATGTAATGTAACTATTCAATATATTTTACAATTATCTTTGT AATATATTTTTTTGGGCATCTGGTAACAGATCTTATGTCAACAAGTCAGTTGTTAGTTGGTTGGTGACCATATGATATAT GTCTACTCTTCCTACTTCACCTTATTCCTCCACTTACCTTTGTTCTGCCTCACTTTCCTTCATACAATCATACTCTAACT GGTTTACTTCAAATTGCTTTCTCTGATTCACTTGATCATCTGCCATTGATTTAGTGTTTGATTGTGCAGCATTTACATCA AATGGCACCTACTGCTGATACAACACCTCATGAACAGGCAAGTCAATTTCTTTTTGATAGACTACTTTCCCTTCTCTTCT TTTGATATGTTGATGATCCCTTTATTTTCCCCTTAAATTATTTGTAATTTCTGCCATCCATAATGGGTTTCCGCAATTAT CATCCAAACAAGGCATGCTAGTAATTTATGAATGGATGTGTTGATTTTGGTCTTAAGGTTGTTCTTGGAGAAGAGATAGA CCATGTGAGGCTCATCACTTTGAACAGGCCTAAGCAATTGAATGCTATCTCACCTGAACTGGTAACTCCATTCAACTCAT CTTTGAAAATCTTGCTTCATGGCCCCATTCTCCTACTACTGTTTTACTTATTTTTTTTATTTTATCCTTGGATGCTACCA GGTTTCTCTGCTAGCAGCATATTTGGAAAAGTGGGAGAAAGATGACGAAGCATACCTAATTATAATAAAGGTTGTTGTTT ACTTTATTAACCTTTGAAATTGCTGGAATAATTTTAGTAGTTTACTCTTACACATTGAAAATTATGTTACTATATGGCCT ACAGTAATTAAACATTCTACCATCCTCCTGCATTTGTTGCTTGTTTCTTATGCTCATTTCACTTAGTTTCTGTAAAATTG CTTTTCCAGGGAGCTGGTAGGGCTTTTTGTGCTGGAGGGGATTTGAGAGTATTCTATGATGGCAGGAAAACAAGTAAATG CTTCATTCTTTATAGAATTTAGAGGAATCTCAATCTGTGCAAACAATGTTCAAACAGAAATTTCAATCTTTTTTTTGAGT TAGCACTAGTAGATACAATTTAGGAGAGAAACAAATAATGAGATGTCTTTACATTGTCTACACTCTTCTGAAGAGTAATG TATTTCTCCTTGACAGAGGATTCCTGCCTTGAAGTGGTCTACCGATTTTACTGGCTTTGCTATCACATCAAAACCTATAA GAAAACCCAGGTTCTGTTCAGGAACTTAATTCCATTTTGTCCTTAAACATTCATAGCAATGTGGTTGTGACAATTCAGTG ATGTCTCATGTTTTCTAGAATGGTGCTGTAATGTTTTAACAGGTTGCTCTTGTTCATGGAATTTCAATGGGTGGAGGTGC AGCTTTGATGGCCCCTATGAAGTTCTCAGTCGTAACCGAGAAAACTGTGGGTATTTTATCTTCTTAGATATTATGTTCTA AATCCTTGTTTAGTTAGTTTTATGATGTACTTATCAAGTGCACCATCTCCTTAAATTTTCTTGGTGTGTTAAAACAAATG CTGACAGGTTTTTGCCACTCCTGAAGCAAGTTTTGGGTTCCATACTGATTGTGGCTTCTCGTACAACCATTCTCGTTTAC CAGGGCATTTGGGTAAACCACAATCTCACTTACAATTCCTTTTATGAATCCTCTTTCACTGTTCAGAAAAGTTCCCCCCT TGCACTTCTATCTCCCTGGTTGTTTATTCCTCCATGACAGCACAAGTGTATATGAATTTCCTGAATTAGAACAAAATGTT TTCAAAATAGAGAAAAAGAAACATTAATTGATTACATAGAAAAGTGGAGAGATTATAATTCATATATGTCATACACAGGT GAATACTTGGCACTTAGTGGAGCAAGGTTGAATGGGAAGGAATTAGTTGCAGCTGGACTGGCAACCCATTTTGTCTCTTC TGAGGTTTGATTATGTTTAGCTTCTGGTCTCCCTCTAGACGAATTGGCTAAGAATAGTTACTTCTTACTCATGCTAGTGT AATCATAGTTTCATAACCGATTGTTGTTAAGGCAAGAGGCAGTGTCTAGTTAAATTACAAAAATCTCATTCAATCTGTGT CATCCTGATTCGAATTAATTTGTAATCTAATGAGAAGCTTGGAGAGTGTTAAAAAAAACCTAGGATACATCTATATTGTT TTCTTCATAAAGGATGTAAACATGGTTAAATCAGCAATGGCATCTGGCATAGCAATCCAAATTTGTAAGTAGTACTATAG AGTATAGACAGCTCCACAAAGTACACAATTTCAATTTCACGAAGTACACAAATCTAAGTGCCTCTCCCATCCACCCCTCC AATTATAGCGAACCTTCTGGGTCTTATAAACAACCATTACCATATCTTTGCTAGAGATAATGAGTTTGTGTTAATTTGTT AATGATCCTTACATTTTCTGTGTACCAGCAAATTGATGAGCTAGAGAAGCGCCTGATCAGCTCAAACTCTGGTGATGAGA ATGCTGTAAGATCAGTGATTGAAGAATTTTCATTAGAAGTTAAAATTGATGAAGAGAGTATCCTAAACAAGTAATTTCTT TTTTCTTTTTACCAATGATCTGTAATTTGTTTTCTAAATTTATGCTTGACAGTAACATTTGGATAATTTCAGGAAGTCAA TAATTGATGAGTGCTTCTCAAAGGATTCTGTTGAAGAAATTATAAAATCATTGGTAAGTTTCTAAGCATTTCCATATGAA TATTTATTATCTTACTGCATGCTTGTGTTCTTTCTGGGAAATTATATGTTTATATTCTTTGATGTGAAGGAAACTGAAGC ACAAAAAGAAGGAAATGGATGGATAGGTGCAGTTTTAAAAGGAATGAAAAGATCATCACCTACTGCATTGAAAATAGCCT TAAGATCGGTAAGGATTTTATGATATACATTAGGATCTTAGAGTGGATTCTATAACTATATTGAGTTCCTCAAATTATGA TTGGCAAATAAGGCTCAAGGTTGAAGCAATCAATGATATTATGAAATAACATTTTGTAACATTTTTATATTCCCTGAAGT TTTGATTGTGTTTAAACGTCACGAGTAAAGTCCCTTCAATGCTTTTAAAACTACATTCTGTCAAAATTGAGAAGAGACTA AATCAGGACAAAGAACAGAAAATGTTAAAGCATAATCTAGTTGATCACTGAGTCTCTGGACATGAAACTGAATGAATTAT CTTGGATATGTGCAGGTTCGCGAAGGAAGGAATCAAACACTATCTGAATGTTTAAAGAAGGAATTCGGATTAACAATTAA TATACTCAGAACTGTAATATCTGAGGATATGTATGAGGTAATTGTTGTGATCTTATTTCCAGAACAAGCTCAATGTTGTC AAAAAATGTTTGAATAGTCTGTTCCCTTCTAAAATCTGAAGCAAATTTTTGTTCTATTTCAATGAGAAGGGTATTAGAGC TCTCACCATCGACAAGGATAATTCTCCAAAGGTACTCCTTCACTGTTTCACTCATAGTCTTGACTAGAACAATGCTATCT ATTTGGTTTGGAAATTAGCACACATCGAGGTCAATTAAGGAATGCCAAATAAAAACTTGAACGTGAAGTGAAAATTTAAA TTATTATTATTATATTTGTGCAGTATCAAAATAAGTATTAATAACTACATGCTACTTGCAGAATCATGTACATAGGTTCT TTTATTGGTATTATTCTTATTGTTTTGCCTTTTATAACACTAAATGATTGAGTTGTTCAGTGGGAACCTCCATCACTTGA TAAAGTAGAGGATGGAAAGTTGGACTTAATCTTTCAGCCATTTGATAAGGATTTGGAGCTACAGATTCCAGAAAGGGAAG AAAACAGGTTGGTTGCTGTTTGAGTTTTTCTTCACTAGTATGATGTCTTCTTAAACTTGTTATTCTAACCAAAATCCCTT TCTCTAATTCCAAACAGATGGGATGGTAGATATGAGAGTTCAGCTTATGCTGTTCCAAACTGAGCAATGCCAATCTCTGG TTAGAGGTTACTTGTGAAGATAATATTTATAAAATAAATTTGTGGAATATTCCATTATGCTCTAGCTTTTTGGAGGGAAA TGGAATGATTATTGAGTGAAACGTGACATAGGTTTTCTAGAAGAAAACATTCTTTTCATATATAGATAGACTACTTGAAG CAATTGTGGCCCAACAAGTGGCATCATCATGTAAAAATAAAATGTTTGCATTCAGAATGTTTTTGGGCCTAACAATTGTA AGCCAATCCTATTTAATCTGTGACGCTTGAGCATGGAGTCGAAGCCGAATAATGTGTCCTTTCTCCTCTGCGTCTCTATA CATTCCTGAAATTCAGACATAAATTTGACATCCTCCTTGTATTCTTCATAGACATAAATGAGGGACCAACTTGGAATTCC CATTGTTGTCCTGTCTTTGGTCCCCATTACCCTTTCAGAGCCACATGGTATGGGGTCAACTCACATGAAATCTCTACTTG GTTCCATTCATGTTCTGAAAATGCTGTCTTCTCTTTGCATAATAGATCACACAAAAGCATTTGTTCTGTCATTCTTTCTG TAGAAAATATGTAGTTACATGAAGAACTTAACTGATTGGTGCCATTGATGAGTACACTGAACTTGAAATTCAATATCATA CTAGACTAAAACTAATGTAATTTGAGGAGATAACCATTCCAAAATATTGTAGGACGTTTATGTTATTAGGGGCCCATTAG AAGGGATGCCAATGATTTTGGAAGTATTAGCCAGTAGTGTACCTTCTGTTGTCTCTCTCCCTTTCCATTTTCAGTTGTTC TATCCAACTCATTTTTTCTGCCACTTGAACAATTTAAATCCATCAAATTTTGTTTGTTTTCTACAATTTTGTATCAGGGT AAGTAAATTTTGTGTCTTTTCAACAATTTTGTGTATGACCCCCAAAAGAAAATAGCAGTAGGAGCTTAGTTGAATCAAGC AGTTACACTATGTCATGTGCAAAACCCAAGGGGTGAAAAAGAGAAGAAAAGGAAGAAATACATGAAAGGAAAACCTGATA ACTGAATTCTGCACGATTAATTTCGCAAATCACTGTGAAGCTACTGGTTAAATTGATATTATCAAAAGAAGAATAGAACA CATTTTTTACGGGTAATATTAGAAACATGTCAAACCTTCACTTAAAATTTTGGATAAGACTGAGGTAGTTTTATTCTTAA CCAAATGGATGGATGTATTCATTAGCACGTAGAAGATAACATCAGCTACAAAGAAAAGCAAAAGCAAAAGATACATTAGG TTTGAGTAAGTATTAAGAAACATGAAATAGCTCATACTTCAAAAAGAAAAATGACCGATGACTTTTGGAAATCATAGATT TTTGTTACACATGCAGTATAATAGAACACATATCACTTTGAAAATTCAGATTTTATTCATAATGTCTTTCATGCATGGGA AAATGGGCCTTAGCTAGCGACCATTA
CDS sequence (LotjaGi6g1v0174500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGATGTGTTGATTTTGGTCTTAAGGTTGTTCTTGGAGAAGAGATAGACCATGTGAGGCTCATCACTTTGAACAG GCCTAAGCAATTGAATGCTATCTCACCTGAACTGGTTTCTCTGCTAGCAGCATATTTGGAAAAGTGGGAGAAAGATGACG AAGCATACCTAATTATAATAAAGGGAGCTGGTAGGGCTTTTTGTGCTGGAGGGGATTTGAGAGTATTCTATGATGGCAGG AAAACAAAGGATTCCTGCCTTGAAGTGGTCTACCGATTTTACTGGCTTTGCTATCACATCAAAACCTATAAGAAAACCCA GGTTGCTCTTGTTCATGGAATTTCAATGGGTGGAGGTGCAGCTTTGATGGCCCCTATGAAGTTCTCAGTCGTAACCGAGA AAACTGTTTTTGCCACTCCTGAAGCAAGTTTTGGGTTCCATACTGATTGTGGCTTCTCGTACAACCATTCTCGTTTACCA GGGCATTTGGGTGAATACTTGGCACTTAGTGGAGCAAGGTTGAATGGGAAGGAATTAGTTGCAGCTGGACTGGCAACCCA TTTTGTCTCTTCTGAGCAAATTGATGAGCTAGAGAAGCGCCTGATCAGCTCAAACTCTGGTGATGAGAATGCTGTAAGAT CAGTGATTGAAGAATTTTCATTAGAAGTTAAAATTGATGAAGAGAGTATCCTAAACAAGAAGTCAATAATTGATGAGTGC TTCTCAAAGGATTCTGTTGAAGAAATTATAAAATCATTGGAAACTGAAGCACAAAAAGAAGGAAATGGATGGATAGGTGC AGTTTTAAAAGGAATGAAAAGATCATCACCTACTGCATTGAAAATAGCCTTAAGATCGGTTCGCGAAGGAAGGAATCAAA CACTATCTGAATGTTTAAAGAAGGAATTCGGATTAACAATTAATATACTCAGAACTGTAATATCTGAGGATATGTATGAG GGTATTAGAGCTCTCACCATCGACAAGGATAATTCTCCAAAGTGGGAACCTCCATCACTTGATAAAGTAGAGGATGGAAA GTTGGACTTAATCTTTCAGCCATTTGATAAGGATTTGGAGCTACAGATTCCAGAAAGGGAAGAAAACAGATGGGATGGTA GATATGAGAGTTCAGCTTATGCTGTTCCAAACTGA
Protein sequence (LotjaGi6g1v0174500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGCVDFGLKVVLGEEIDHVRLITLNRPKQLNAISPELVSLLAAYLEKWEKDDEAYLIIIKGAGRAFCAGGDLRVFYDGR KTKDSCLEVVYRFYWLCYHIKTYKKTQVALVHGISMGGGAALMAPMKFSVVTEKTVFATPEASFGFHTDCGFSYNHSRLP GHLGEYLALSGARLNGKELVAAGLATHFVSSEQIDELEKRLISSNSGDENAVRSVIEEFSLEVKIDEESILNKKSIIDEC FSKDSVEEIIKSLETEAQKEGNGWIGAVLKGMKRSSPTALKIALRSVREGRNQTLSECLKKEFGLTINILRTVISEDMYE GIRALTIDKDNSPKWEPPSLDKVEDGKLDLIFQPFDKDLELQIPEREENRWDGRYESSAYAVPN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 9 | 367 | 359 | 8.3E-109 | – | |
| PANTHER | 10 | 381 | 372 | 9.4E-210 | – | |
| PANTHER | 10 | 381 | 372 | 9.4E-210 | – | |
| SUPERFAMILY | 10 | 335 | 326 | 2.49E-55 | ||
| CDD | 12 | 202 | 191 | 1.76128E-53 | – | |
| Pfam | 20 | 352 | 333 | 7.9E-109 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 3-hydroxyisobutyryl-CoA hydrolase activity | Catalysis of the reaction: 3-hydroxy-2-methylpropanoyl-CoA + H2O = CoA + 3-hydroxy-2-methylpropanoate. |
Expression pattern of LotjaGi6g1v0174500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…