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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0177300 |
Transcript ID | LotjaGi6g1v0177300.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Molybdopterin synthase catalytic subunit; TAIR: AT2G43760.1 molybdopterin biosynthesis MoaE family protein; Swiss-Prot: sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit; TrEMBL-Plants: tr|I3S4E4|I3S4E4_LOTJA Molybdopterin synthase catalytic subunit; Found in the gene: LotjaGi6g1v0177300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:46917771..46922900) extracted from Lotus japonicus Gifu genome v1.2.
GTACCTTTTGATAAAGTGTATTCTTTCGTTTTTCTGCTGTTGCACTGGGCTCATATCTTTGCTGGCCCATTTACTTGTCG GTAATAACTGTTTATATGACTGTTGAGTGTTGACTACCTGTGCGTATTTGTTTTTAATTAAAGGTGTTCAGTTAAAGTTT CACAGAAAGCTTAGATGAACTCATATATCATATTGACTCAGAATGCACTGGATCCAACCTTAGCATAACTGTAGTTGGAG CTTCTGGAGACCTTGCCAAAAAGAAGATTTTTCCTGCTCTTTTTTATGAAGATTGTCTACCAGAGGTTCAACTTGCCACA GTATTCAGTGTCGTTTTGCAGTGATGCTTTAACATTGGTGAAATGATTTGTCTTAAATGATTTAAATATTCGTGAATATG ACGTTTGAGGCTCTATTCTTGTAATCATTGAGCAGAACTTCCTGGTGTTTGGATTTGCTCGGACCAAAATGACCAGTGAA GAATTAAGGAACATGATTAGCACTTAGCAGGACTTTAACATGCCGAATCGATAAGAGGTAATTTTTATTTTAGGAATGCT ATTTGGTATGAAACTATTTGTACGAAAGTTCATGCTGAGTTAGTAAGATGTACTTGTTAATGTAGCAGTGCTATTTAAAA TCTGTATGAAAGTTGTAACAAATCTTGGTTAGAGAGGAAAGAATAAGGTTTGAAAAGTAAGTAATTTGACTAAATGCAAC AAAACTCTATTATCCTGCTTTATCGTTAGTCATTGCTAACACAAATTCATATCACTTTAGCATTTTTCATGTTATTAGTA TGATGTAAAACCTTACCTTCTACTTTTCCTACATTTACTTTCTATTTGTAGATCTTTATACATATTTTGTACCTTCAGGG CAAACTGTGAAGATAAAATGGATCTGTTCTTAAGAAGATGCTTTTACCATTCTGGTCTATACAATTCTGAGGACAGCTTT TCAGATTAGGATTGCAAGATGAAGGAGAAAGAGGTAGTATATCTATGATGTTTTACTTTATTTTCGTCCTCCACTGAGCT CCCTTTACTCATGCATCAGTAAATGAAAAAAGAAATAAATTTGAAAGATATTTTATCTGATCTTATTTTTTATTTGATTC TTAAATTTAAAACACTGAGATAACCCTAAACATGAATCTCCTCAGATAGGCCGCATAACAATCACCAGTCAGTTAGTAGC TTCCAAAAATTCAATATTCCGTTGAAACATAATGCTGGGTTTTGGAGATCTTTTCTCTCTTTAGAATTGGATGCAAAAAC CTCTAGACCAGATGGTGGTGATTTGAAAATTTAAAATGTGATGTGCAAAAGGGTTCTATTTTCGAAAAAAATAATCTTAA GACTTTTTTATTTTCCATAACTAAATCTATCATACAATCTAAGATTAAACTTTTCATGGTAACTTTGTGCTTAAGCATTC ATCTTTATACTAAATTTTGACATATCTGACTGCTCTCCTAGGGTGGAAAACCTTCAAACAGGTTGTTTTATTTGTCAATA CCTCCAAACATATTTGTGGATGTGGTAAGATGTGCTAGCCTTAAAGCTTCTTCAAAGAATGGCTGGACAAGGGTTATTGT TGAAAAGCCATTTGGTCGTGACTCGGAATCGAGCTAACAAGATGTTTGAAGCGGTACCTCACTGAAGATCAAATATTCAG GTGCAGTTAGTTCTGTTTTACTTTGACAAGCTAGAGATGAAAATCTGGACTCATTAAGTTTTTTTTAGGATTGACTAGGA CTGTTCATGGTTCGGTTCTTTGCTTGAACCAAACCGAACCGAACCTGAACCAAAATTTTGGTTCGAGAGAACCGATCCGA AACGATATAATATGGTTCGAACCGAACCGAACCGGTTTTAAATTTCGGTTAACCAATTCAGTAAAATATGCATATTTATA GATGGTTCGAACCGAACCGAACCGATATACTATGGTTCGAACCGAACCGAACCTGAACTGGTAGTTGATATTTTGGTTCG GTTACCGAACCGGTTTTTCAATTTAGGTTCGAGTTTGGTTCGGTTCTTAAAAGTTCGGTTCTTAAATGGTTCGGTTTTCG GTTTGGTTCTTGGTTAGTTTCGGTTCTCAGAGAACCATGAACAGTCCTTGACCATTACTTGGGTAAGGAGCTCGTGGAAA ATCTATCTGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGACTTACATTCGCAATGTACAACTAATA TTTTCTGAAGATTTTGGGACAGAGGGCAGAGGAGGGTGAGTCATGATTAGTAAAATGTTTCTTGATGGTATTGCATATAA TGATACAAATGATAATTCACACAACTAATCAGACTGTCTTTATACTTTTCTTTAGTTATTTTGATAACTACGGAATCATT CGCGATATAATGCAAAATCATATTCTGCAAATACTAGCGTTGTTTGCGATGGAAACACCTGTCAGCTTAGATGCTGAGGA CATTAGAAATGAAAAGGTATATACCTTATTAATAATGTTATATTACTGCTTTAAGTAGTTCTCCTAAATTTCCTATAATC TTATGGAAAGATTTCATCCAACATCATTATGTTCAGTGATTACTGAGAATGATCTCAACTCAGGTTAAGGTTCTGAGATC AATGAGACCACTGCAGCTTGAAAATGTTGTTACCCGTCAATATAAGGGTCACAGCAAAGGTGGTAAACAGGGGCGGACCC ACGTTGAACTGAGGGGTTTCAACTGAACCCCCTGAAAAAAAAAATTCCTACTTACCCTCTAGAGTGATTTTTTTTTGAAC CCCTGAAATTTGAAAATTGCACCTAGGTCCCAGTCAACACTCAGTCACTTAGGAATTGTGTATATCATATATGAAGGGAA TTGAGTTTAGTTTATTTAGCATAAGCTTGTTGTCCTGATGTAGGAATTGAGTTATAAGCTTGTTGTCTTGCTTTTCCTTT TGCTGAATTTAGTTTGTGTATATGAAATTGAAGTGAAATTAGACTGGGAAATAAGCTTGTTGTCTTGGTTTGAGATTGGA AATTTGGAATGTGAAGGGAAATGAATTCATCCATCAGATGATCAGAACCCAACTCCCTCTTTCCCATCACCAGTCAACTC AACACTCTTTGCTCTGCTGAACGCGGGTAATTGCTCATTCCTTTGCTTTTCTTTGTTTCTGTTTTCTCATTCTCGAGTGT TCTTTGTTTTTCCTTTTTTTAAGGTTTGTAATTTTTAAGGTTGTTGCTTATAAGTTATATGTTCTTACTTTGCTCAACTG TAGTGTGAATCTCCAACCACTGTTAATTTCAACTGTCTGGTACCTGAGTGAATCTATACTGATTTTTTGGGGGTTGGAAT TTGAACAATGTTTTTTCTGTTTTGTTTTCTCCCCATTGAATTAGGAGGAAATTTCACCAATTTATCATCAGATTCTAATT TTTCAATTCCTAGTAATTAAATTAAACCCCTTTTGGGGATGTTTTTCATGAGATGTGGGGTTCTTTGATTTTGTTTTTTA AACTGTATTAGTGGGTGAATTGGTCTTTCTTGTTATGAAAATCTCTGCTGAACCATGAAACAGTTTGTGGCTCTGCTCTT TGGTAAATGATGTATAGTTAAACAAAGGAAACTTGAATTATCATCTGGTGAAATTTATGAATGCAGTACCTAGTAAATGG GAGCATTTTCATAAATTCTTGTATTGAAATGTTATCTACATTTTCATGTTGACAAATCATGATATGCTAAGCATCAAATT AAGCTGAAAGCTTCCCTGGGTTGACCCTTTTGTTCTAGTTTGCTTTTTGGTATTTTATATTACCGAGTATTTCATGAGCT TCATCATGCCTTGTGCTTGTGCAACTCTAAGAGGCTATAATGAATTTGCAGGATGGACTAATAGGCTTGTCTATTTAATC TTTGAGGGAAGAAAAAGCTCTGATAACACCAGATTTTTGTTCCATCAGCATATTATCTGAACATCTGGCAGAAAATGGCT GCAGAAGATGATAAGAATCTTGTTGAAATCTTGGAAACCCCAAATCCCATAGATGTTGGCAAGTATATGAATTATGTCAG TGCCCCGCAAGCTGGTGCGATAGCTACATTTTCAGGCACGACACGCGACACCTTTGAAGGCAAAGCAGTCTTGGAGTTGA GATATGAAGCTTATGTTCCCATGGCGATTCGTTGTATCAATTCTGTCTGTTCATCTGCGAGAGCATCCTGGAATCTGCAT TCCATTGCTGTTGCTCATCGCCTAGGCACGGTACCTGTAGGAGAAACGAGTGTCTTCATTGCAGTCTCATCTGTCCACAG GGCTGATGCACTAGAGGCATGCAAATATTTGATAGATGAGCTAAAAGCAACAGTTCCTATTTGGAAAAAGGAGGTGTATT CAAATGGAGAGGTTTGGAAGGAGAATTCTGAATTCCTGGACAGGAGGTCAGAGCTTGGTAACAAGGATGTAGCTTGCAGT GGGGAAAAGGCAGAAGTTAAAGACCATAGCAAAAAGCGCTGCTGTGGGACTAAGGTTCGGGTTGATAATGAAGGTAGCCA TGACTAATTTCAATGCCAGGGATCAGAGATACTAGATACCAGCTGGTGATTGCAGTTATTTAACATCAGTTTAAAGATTA CCTCTCTCTTCCACCATTCCCTTTTCTTTGATGTTATTAAGATTGTATTTAAACTTAGAAGGCAATAACCTTGCCTATTT CTTGAGATATAATGTCATCAATGTTGCTCTTATACTTTTCTCCCTGCTTCTCAGCAACTTAAGAAAAGTAGCGAATTTTC TAAAGATGGTCGGGGAAAGATAGGAAGGGAGAAAGCTAAGAGAATACAGTATACATGCAATGGTCCCGATATTGTTGAGA TAACAAAATAACCAATCCTGTCCAGTTTAGTTTTATTGTGAACAAAATGACAACAACATTTAGCATGGTTTTTTATACCA GTTGAGTGCAATTTGGATGCATTTTTACCTCAATTTATAAGAAAATGAGTGTAGTACTTGTAAAGATGCTTGCACCACTT TTCACATTCCAAACATCTCATCAAACTCTACTCTTGATTCCTGAGTACTGGCAGAATGCCCTCAATATGTGCCTAGCAAT TCAAAACTTT
CDS sequence (LotjaGi6g1v0177300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCAGAAGATGATAAGAATCTTGTTGAAATCTTGGAAACCCCAAATCCCATAGATGTTGGCAAGTATATGAATTA TGTCAGTGCCCCGCAAGCTGGTGCGATAGCTACATTTTCAGGCACGACACGCGACACCTTTGAAGGCAAAGCAGTCTTGG AGTTGAGATATGAAGCTTATGTTCCCATGGCGATTCGTTGTATCAATTCTGTCTGTTCATCTGCGAGAGCATCCTGGAAT CTGCATTCCATTGCTGTTGCTCATCGCCTAGGCACGGTACCTGTAGGAGAAACGAGTGTCTTCATTGCAGTCTCATCTGT CCACAGGGCTGATGCACTAGAGGCATGCAAATATTTGATAGATGAGCTAAAAGCAACAGTTCCTATTTGGAAAAAGGAGG TGTATTCAAATGGAGAGGTTTGGAAGGAGAATTCTGAATTCCTGGACAGGAGGTCAGAGCTTGGTAACAAGGATGTAGCT TGCAGTGGGGAAAAGGCAGAAGTTAAAGACCATAGCAAAAAGCGCTGCTGTGGGACTAAGGTTCGGGTTGATAATGAAGG TAGCCATGACTAA
Protein sequence (LotjaGi6g1v0177300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEDDKNLVEILETPNPIDVGKYMNYVSAPQAGAIATFSGTTRDTFEGKAVLELRYEAYVPMAIRCINSVCSSARASWN LHSIAVAHRLGTVPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENSEFLDRRSELGNKDVA CSGEKAEVKDHSKKRCCGTKVRVDNEGSHD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 144 | 144 | 2.1E-57 | ||
PANTHER | 5 | 183 | 179 | 5.4E-78 | – | |
PANTHER | 5 | 183 | 179 | 5.4E-78 | – | |
Hamap | 10 | 150 | 141 | 51.962 | ||
SUPERFAMILY | 15 | 146 | 132 | 3.79E-47 | ||
Pfam | 17 | 125 | 109 | 1.4E-40 | ||
CDD | 19 | 142 | 124 | 1.96456E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Cytosol | The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. | ||
Biological process | Mo-molybdopterin cofactor biosynthetic process | The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands. | ||
Cellular component | Molybdopterin synthase complex | A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits. | ||
Molecular function | Molybdopterin synthase activity | Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis. |
Expression pattern of LotjaGi6g1v0177300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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