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LotjaGi6g1v0186100.1

Overview

Field Value
Gene ID LotjaGi6g1v0186100
Transcript ID LotjaGi6g1v0186100.1
Lotus japonicus genome version Gifu v1.2
Description Molybdopterin synthase catalytic subunit; TAIR: AT2G43760.1 molybdopterin biosynthesis MoaE family protein; Swiss-Prot: sp|O22827|MOC2B_ARATH Molybdopterin synthase catalytic subunit; TrEMBL-Plants: tr|I3S4E4|I3S4E4_LOTJA Molybdopterin synthase catalytic subunit; Found in the gene: LotjaGi6g1v0186100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:48013738..48016162) extracted from Lotus japonicus Gifu genome v1.2.

ATATTTTCCTCTATCACCTTTGATCCCTCTCATCCTGTATGTCTCACTCAATCTTATGCATCAGAGCCACCGGCTGATCT TAATTGTTTGTCACAGTCTCACAGAGTGATATTGATATGAGTTGAGAGCCGTCATCATCCATCAGATGATCAGAACCCAA CTCCCTCTTTCCCATCACCAGTCAACTCAACACTCTTTGCTCTGCTGAACGCGGGTAATTGCTCATTCCTTTGCTTTTCT TTGTTTCTGTTTTCTGTTTTCTCATTCTCGAGTGTTCTTTGTTTTTCCTTTTTTTAAGGTTTGTAATTTTTAAGGTTGTT GCTTATAAGTTATACGTTCTTGCTTTGCTCAACTGTAGTGTGAATCTCCAACCCAACCACTGTTAATTTCAACTGTCTGG TACCTGAGTGAATCTATACTGATTTTTTGGGGGTTGGAAATTGAACAATGCTTTTTCTGTTTTGTTTTCTCCCCATTGAA TTAGGAGGAAATTTCACCAATTTATCATCAGATTCTAATTTTTCAATTCCTAGTAATTAAATTAAACCCCTTTTGGGGCT GTTTTTCATCTGGGGTTCTTTGATTTTGTTTTTTAAACTGTATTAGTGGGTGAATTGGTCTTTCTTGTTATGAAAATCTC TGCTGAACCATCAAACAGTTTGTGGCTCTGCTCTTTGGTAAATGATGTATAGTTAAACAAAGGAAACTTGAATTATCATC TGGTGAAATTTATGAATGCAGTACCTAGTAAATGGGAGCACTTTCATAAATTCTTGTATTGAAATGTTATCTACATTTTC ATGTTGACAAATCATGATATGCTAAGCATCAAATTAAGCTGAAAGCTTCCCTGGGTTGACCCTTTTGTTCTAGTTTGCTT TTTGGTATTTTATATTACCGAGTATTTCATGAGCTTCATCATGCCTTGTGCTTGTGCAACTCTAAGAGGCTATAATGAAT TTGCAGGATGGACTAATAGGCTTGTCTATTTAATCTTTGAGGGAAGAAAAAGCTCTGATAACACCAGATTTTTGTTCCAT CAGCATATTATCTGAACATCTGGCAGAAAATGGCTGCAGAAGATGATAAGAATCTTGTTGAAATCTTGGAAACCCCAAAT CCCATAGATGTTGGCAAGTATATGAATTATGTCAGTGCCCCGCAAGCTGGTGCGATAGCTACATTTTCAGGCACGACACG CGACACCTTTGAAGGCAAAGCAGTCTTGGAGTTGATATATGAAGCTTATGTTCCCATGGCGATTCGTTGTATCAATTCTG TCTGTTCATCTGCGAGAGCATCCTGGAATCTGCATTCCATTGCTGTTGCTCATCGCCTAGGCACGGTACCTGTAGGAGAA ACGAGTGTCTTCATTGCAGTCTCATCTGTCCACAGGGCTGATGCACTAGAGGCATGCAAATATTTGATAGATGAGCTAAA AGCAACAGTTCCTATTTGGAAAAAGGAGGTGTATTCAAATGGAGAGGTTTGGAAGGAGAATTCTGAATTCCTAGACAGGA GGTCAGAGCTTGGTAACAAGGATGTAGCTTGCAGTGGGGAAAAGGCAGAAGTTAAAGACCATAGCAAAAAGCGCTGCTGT GGGACTAAGGTTCGGGTTGATAATGAAGGTAGCCATGACTAATTTCAATGCCAGGGATCAGAGATACTAGATACCAGCTG GTGATTGCAGTTATTTAACATCAGTTTAAAGATTACCTCCCTCTTCCACCATTCCCTTTTCTTTGCTGTTATTAAGATTG TATTTAAACTTAGAAGGCAATAACCTTGCCTATTTCTTGAGATATAATGTCATCAATGTTGCTCTTATACTTTTCTCCCT GCTTCTCAGCAACTTAAGAAAAGTAGCGAATTTTCTAAAGATGGTCGGGGAAAGATAGGAAGGGAGAAAGCTAAGAGAAT ACAGTATACATGCAATGGTCCAGATATTGTTGAGATAACAAAATAACCAATCCTGTCCAGTTTAGTTTTATTGTGAACAA AATGACAACAATATTTAGCATGGTTTTTTATACCAGTTGAGTGCAATTTGGATGCATTTTTACCTCAATTTATAAGAAAA TGAGTGTAGTACTTGTAAAGATGCTTGCACCACTTTTCACATTCCAAACATCTCATCAAACTCTACTCTTGATTCCTGAG TACTGGCAGAATGCCCTCAATATGTGCATAGCAATTCAAAACTTTAATCTCACACTTTAGAAAGAACATGCAAACAGAAG CTAATAGATTCATGAAAGTTGTGCTCTAACTAAAATGCACCAGACAATTGTAACAACTAATCATTGTATATGGGATAGAT TTGAATCTGTTCTTGCAGACTGCATTGAACGATATTTAGCTGGATTCTGAGAGCATCAGCATTGCGACCGGGGCAACATA TTTTCATGAGTTTGGCACAATCCCT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0186100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGCAGAAGATGATAAGAATCTTGTTGAAATCTTGGAAACCCCAAATCCCATAGATGTTGGCAAGTATATGAATTA TGTCAGTGCCCCGCAAGCTGGTGCGATAGCTACATTTTCAGGCACGACACGCGACACCTTTGAAGGCAAAGCAGTCTTGG AGTTGATATATGAAGCTTATGTTCCCATGGCGATTCGTTGTATCAATTCTGTCTGTTCATCTGCGAGAGCATCCTGGAAT CTGCATTCCATTGCTGTTGCTCATCGCCTAGGCACGGTACCTGTAGGAGAAACGAGTGTCTTCATTGCAGTCTCATCTGT CCACAGGGCTGATGCACTAGAGGCATGCAAATATTTGATAGATGAGCTAAAAGCAACAGTTCCTATTTGGAAAAAGGAGG TGTATTCAAATGGAGAGGTTTGGAAGGAGAATTCTGAATTCCTAGACAGGAGGTCAGAGCTTGGTAACAAGGATGTAGCT TGCAGTGGGGAAAAGGCAGAAGTTAAAGACCATAGCAAAAAGCGCTGCTGTGGGACTAAGGTTCGGGTTGATAATGAAGG TAGCCATGACTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0186100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAAEDDKNLVEILETPNPIDVGKYMNYVSAPQAGAIATFSGTTRDTFEGKAVLELIYEAYVPMAIRCINSVCSSARASWN LHSIAVAHRLGTVPVGETSVFIAVSSVHRADALEACKYLIDELKATVPIWKKEVYSNGEVWKENSEFLDRRSELGNKDVA CSGEKAEVKDHSKKRCCGTKVRVDNEGSHD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.90.1170.40
1 144 144 6.9E-57
IPR036563
PANTHER
PTHR23404
5 183 179 3.5E-77 –
PANTHER
PTHR23404:SF2
5 183 179 3.5E-77 –
Hamap
MF_03052
10 150 141 51.494
IPR028888
SUPERFAMILY
SSF54690
15 146 132 5.75E-47
IPR036563
Pfam
PF02391
17 125 109 4.1E-40
IPR003448
CDD
cd00756
19 142 124 5.43123E-59
IPR003448

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005829
Cellular component Cytosol The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
Subterm of
GO:0006777
Biological process Mo-molybdopterin cofactor biosynthetic process The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.
Subterm of
GO:0019008
Cellular component Molybdopterin synthase complex A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.
Subterm of
GO:0030366
Molecular function Molybdopterin synthase activity Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0186100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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