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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0189600 |
| Transcript ID | LotjaGi6g1v0189600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic; TAIR: AT3G20320.1 trigalactosyldiacylglycerol2; Swiss-Prot: sp|Q9LTR2|TGD2_ARATH Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic; TrEMBL-Plants: tr|A0A151SPZ3|A0A151SPZ3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0189600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:48515536..48522755) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGCCCAATGATTGGATCAATGTCTCTCACTCTGTTCTCTTGGTATTCCATTTCCACTCTTCCCCACCCACTCAGCAC GCACCATAGGGATCTGTAGCCTCTACCGTTCTTCACTTTCCTCTCACACTCACTCACTCACTTGAATGGAAGATTGATTA ACAATGGAAACCGAAGCATGAACCGTTCCTGATCCTCCTCTTCATCGTTCTCATCTCAACTTCCTCTTCTCCGACACCAC CGCACTCACCGGAACCCACCCACCACCGAGGTAATTCCGCCGTTTCGTTCTGATTGTGCTTCTTTTGTGCTGGTTGAGAC TCTAATTCTGTAATTGTTAGCTAATAGCTCTGTGTGTCTCTGATTGTATGCTTATTGAACTTACTATTGAGATTAATTGT TGCAGAAATTGATTTTGTTTGAATTTTATTGATTTTTTATTGTTTCACTAAGATTTGATCATACATTGATTCTTGGTTTC CTATTTATCATGTTGAATTGACTAGGAACTAAGCTGGTACTTACTTCAACTAGTTAGTTACTCACAGTAGTTAGTTTCTC TTTCAGTGTTAGATTCACAGGCAAGCTTGTTTTATGAAGATTCTAGGTGCTTCTATCAGAGAGCGAAGTCAATTGAGTGT AGTTTCAGAAGGTTGCAATTTGAGAGTTGTGAGCATTAGATTCATTTTGCCATGTGTACTCGATAAATTGGAATAATCAT GTGGTAGTTATCAAAGAAAGTATGTTTAAGTATTGATCATTTTCGATATTTATCGCCTGAAATTTTTGAACTGTATTATA TTCCTGAATAATCACGTGGAGTAATGTATGTTGGCCACGGTTTAAGTTGCGAGAATTGTTCGAGCATCGGATATGTGTTG GATTCTTTGAATGGCTTAATTCAATCACTTGAAATCATAAAGCATCATATATGTGAAGAATTTAGGCATACGTTGAGTCG TTTATGTCAAACAACCAATTATCCCAAAAGCTTAAGATTTTGGGTAGGGCTACTTGAATGGTTTTAGATTATTATCTCTA ACAGTTCTACTGAAATGTTACTCCCGTGGAGGAATACAAAGATATGTTTACGTTGTTTCTGATTTTTTTTTTCATTGCTT GAGTGGATGTATGCGCGGGTATCCGCAAACCTATTGATGCGGGTAACCACGTGGGTATTGGGAGGACATGAGCATGGATA TTTGCTCACAGTGCTGGTGGCGGGTACCTACTACCTGTGCCCGCCTCAGCCCCGTTGCCATCCCTAAAAATCAATCGCTC CATTCCTCTTGTTTTGCTTCTTATTTTCGTTTGGGGTTCACTTTTGTTACGACCAAGAATCAGAGAGGGAGAAAGAGGAA GAATATCATAGAGAATAGGGGGATAGAGAAGTGTTTCATTATCACAACTATCAACAACATAACTATTCTACAAGGCCTAA GCCTATTTATATAGGCACCCCTAATATATCATAACATATCCCTCCCCTTAAAATTTTCCTTGTCCTCAAGGAAACTCGAA AAATCCAATCAACAAAATGAACAACTAAACTAAATGATACAAGACTAAAAAAAAAAATTGACACGGGCTCCAAAACAAGG AAGAGAAAGCAAAAGTAGCAACAATTTCCCTTGTAGCCTAATAGCCTTCTAAATCTAAACCCATAAAGACATGCATCTCT AGGCCTTTGTTTTTGTGTTTCCTGCAAGAGCCACCACCAGCAGCAAGGCCCAACTCCTTTGAGCAGTTTGGGCTTGGCCC ATTCCAATGGGAAAAAGGTTGTCCAACGTTTTCCCTCTCACTTGTTCCATGTCCCTATGCGAAGTCCTCTTCCAACGCTT GCACGGCTTGCACCATGCCGCAATATCAAGTTGCCCCCACCACGGAATCAGACCCACCGCCACATCTGGTGGCTTCGCCG GTGGCCTCCTCGCCATCACCATCTTGCAAGAGCCGCCGGTCAAGAAGCTTGGAACTCCACCGTGGACGAACACGTTTGGC GGCTTCGCTGGTGGCCGTGTGGCCAAGACTGGCGGAATGTCTCCGGTCAAGACGCATGGAACAAGGATCGCCGTAGCAAG GAGCGAATCTGGTGGTTTCTGCGGCGGTCTTCTCGCACCGTCGGATTCAGAATCCTCAACACGAGACCAAACGATGCCGA AGGACATGGAATCGCCGTCGTAATTGCCCAGAACGCCGCTGTGAAGCTCTGAATTCCCAATCTGTGACTCAATTGCGAAC CCTAATTTTCCAATTTGGGAATGCACGAACTTGTGAATTTGGGGAAGAAAGAATCTTGATTCACGAGTTTGAAGCAGAAC ATCGTCAATTTGAGGAAGAACGGTGTCAGTTGGGGAAAGACTGCCGTCAAGAACCGTCGCCGGAACGATTTCGGGAAGTT CGCCGTCGATAATCATCGCCGGCTCGTCCTCCTCCTTCACCATCATCGCACATTCCGCCTCTGAGAGCGCCTCTGCGTCA CGTTCTGCCTCCGCCGCGAGTCGCTCCGCCGCCGCTGCCGCTTTGGCTTCGTACCGCTCGTACGCCGCCATGTACTGCTC GTATTCGGCCATGTGCCGCTCATACGCCGCTGCCGCTTCTTCTCGCAGGCGAACTTCTTCACGTCGGCGAGCTGCTTCAT GGGAACGCTTCAGGGATTCATCAAGCCTGTCGAGGGCTTTCCACCAATCTGCATCCATTTTTTCTTTTTTGATTTTCTGG TTCAGGTGCACCGGATCGGTGCTCTGATACCAATGTTACGACCAAGAATCAGAGAGGGAGAAAGAGGAAGAATATCAGAG AGAATAGGGGGATAGAGAAGTGTTTCATTATCACAACTATCAACAACATAACTATTCTACAAGGCCTAAGCCTATTTATA TAGGCACCCCTAATATATCGTAACAACTTTATTGCGCTCAATTTCACTGTGCCAACAGTGTGCTACACTAACCCATAATA ATCAATCCACACCATGAGATTTTACCTGGGTTTTCATTTTTCATCATAAACCAGAATCTCATCTTGGTGGATTGATGTTG CTACTTACTAGAGTAGATACACAAGTTGGAACCTTTGGTAGCAAAATATCCTGGTTGAGGGGCTTTCCTCGTTAAGTAAA ATTTAGTATTGCATGGGATTAGGATTCCATTGAAATCCATTGTTTGTTTGTTTGTTTGTTTGTTTTTTCCCTTCTACTTG GTGCCCTTTTCCATGTCGGCAAATGTATTAGCATCTTGGGAAGGTGAAGTGTAAGGGGGTTTTCCCCTCAAGTTTTGAAT CTAAAGTCAGTTTATTGGGGCTTTGATCATTTGATGCATTGGGTTTTTTCTGCATACATCATGGGTCCATTAGTAATCAG TTTTAGTTCTTCTTGTATGGTTGTTGGTTAGAACATTTGGAATTGGGCATGCTACTGTGTTTTTGTAGTTTCTTGTTTTT TGTCATCTCTTTTTGTCAATTATGCTCTATTGTTGATGATATTTACGTGGTTTTTTATTTGTAGGGAAATTTTAGCAGCT CAAGTATCTTTTTCTTGAGATTCATTTCCAGTTAAACTTTTGGGACTGCTGGTACTTGTTTGTTAGGACGTTTTGTCTAC GATGGTTGGAAATCCTCTAGTGCATGTCTCAACACTGCCAAGTGCTTTATCTTCATCTGTGATTACTCTACGAGGAAGTT CTTTAAATTGCATACCCTGCCTTCCATTAAGGCCCCAGAGTAAAAGCAACCGAATCAGAGCTTCTTCTGCAGATGCAGGG CAGGTTGAACCTTCGTCTGCTTCAGGTTCAAAGAATCCTCTTGCAGTTGTTTTGGACATCCCTCGTACTGTCTGGAGACA AACATTACGTCCATTAAGTGATTTTGGGTTTGGTGGCAGGAGTATTTGGGAAGGTGGGGTTGGACTATTTTTAGTTTCTG GTGCAGTTTTGTTTGCACTTAGTTTGGCTTGGTTGAGGGGTTTTCAAATACGATCCAAGTTCAGGAAGTACACTACAACT TTTGAGTTTGATCAGGCTTGTGGTATATCCACTGGGACACCGGTGAGGATTAGAGGGGTAACTGTTGGCGATGTGATTCG TGTGAATCCTTCTTTGAGAAGTATTGAAGCAGTTGTTGAGGTGCCTCTTGAAAGCATTATCTTGTGATGCACATGAAACC TTGTTTCCCTTCTTATACCCTAACATTTCAGTGTTAAAATATTGCTTGGCTTTGGTATTTGTTACTTTAGATGGTGTGGT GTATTAGTAGTTTAAACTTTGGTTTTCTTCTAATTGTAGATTGAAGATGACAAAACCATCATACCACGGAATTCATTGGT TGAAGTTAACCAGTCAGGTCTTCTTATGGAAACTATAATTGACATTACTCCTCGAGATCCTATTCCAACGCCTTCAGCTG GACCTCTCGACCAAGAATGTATTAAAGAAGGTCTCATTGTGTGTGATAGAGAAAAGATTAAGGGTCAACAGGGCGTAAGT TTGGATGCATTGGTTGGGATATTTACCCGCATTGGGAGAGATGTAGAGAAAATTGGTGTTGCCAACACCTATTCGTTGGC TGAAAGAGCTGCTTCTGTTATTGAAGAAGCAAAACCACTTCTTACAAAGGTGTGATGTAATTTTCTTAAACTAGTGTGCT TGATTATGGTAATATATGCTCTACACTGAACTGTTGAATCAGGAAACTTTCTTGCCCATTCAAAATGGATGGTTAGCCAG CTTTGATTTTGTTATAGTATATCAAACTAGACCTGATTGTTTGTTAATGCCGTGTAATTCTCTGTTTGAAAGATTTGATT TGGGAAGTCTGTTTTATCATTTGCCTTTATTATCTTGATGGTAACCTATTATAGAACTTCATTGTTTTCAGCAGAGTTGT TAACCAAATAACTTAACAGATGGAACAGATGTCACCAGTTCTCTCTGGAAAGTTTAAATCCATGGTTTTGTACTTTTAAA CTTTTATGGTCTGCAAGAGCATACTTTTTTTTACCATTCTCGTAAAGAATACTGGTAGTATCAAATTATTGTAAGAAACA CAAATATCTTTTGAATAAATTCATATGAACTCATCCAAATTCTCTGGAACTGATTATGGATTTACACTAACTTATCACTC ACCAGCGGCTAAATAATAGGGCTAGTCCATGATTGTGGACGAATAGTTAAATGATAAATAAGCTGATAATGAAATCTTGC TTAAACTCTGGTTCATCATATGTGTGTGCAAATTTATTGTTGTCATGTACTAAGTTGTATCGATTTGTTGTTTCCTTTTG CATTATTCTGTTATACATTTTCATATCCATATTTTCTCTTTTGATGTAGTGATTTTCAGATCCAAGCCATGGCTGAAGAT GTTCAACCTTTGTTAGCTGAAGTCCGTGATAGTGGCCTTTTGAAGGAAGTTGAGAGTTTAACCCGAAGCCTTACACAGGC CTCTGAGGATTTGAGGTTAATTTGTAAAACTCTCATGCCCTCATTTATCTCTAGTTTGACATGCATTCATATACATAGCC TGGTAGCATTGTTAATATTAGTTTAGAGCATGGCATTAAGTTTGTCAGCATTTTTATCGACCGACTGATCGTGATTAACT GTTAACTTATCAATAATTCAGTTGTAACTTGTAGCAAAAATAATATATTTTTGAAAACACAAGTTATATGGAGAAAGAAC GTTAGAAATGAGCAAAGTTATATGGAGAAAGAACGTTATCGACCGACTGATCGTGATTAACTGTTAACTTATCAATAATT CAGTTGTAACTTATAGCAAAAATAATATATTTTTGAAAACACAAGTTATATGGAGAAAGAACGTTAGAAATGAGCAAAGT GTATGAAATTTCATTCTCTGTGAGTTATTTCCTTTTTCTTAAAGTAATACAAGACATATTTATATTGAATTTCAAAATTA TCATGGAAAGGTAAAGGTTGGAATTTTTGTGCTGATGCTGTTTTAGAATTGCTTGTCTTCAAAGATAATGCCATTCTTCT ATTTCTATTTCTTATCCATAAGAATTTTGAAAATCAGAAGAATAATTTAAATTTCTTGAAAGATGAAATCTAATATAAAT CATTCATGTTTATGCAGAGTTTTGAACTGATTTAAAAGTCCTTTTACTCTTTATTTTCACACTTAGAATATTCTTCAAGT ATGATGACTAGTTTAACTCGCATATTTACACAACTAATAGAGCTCATCAAACACTGATGCAGAAGGGTGCATTCATCCGT TATGACCCCTGAGAACGCGGAACTGATCCAGAAGTCCATTTACAGTCTTATTTTTACCCTGAAGAATGTTGAGGTAGGAC CCTAACTTTGATATTGCCTATAAATGAAATTAATAAGAAAAATATTCGCTAATCTATTTGATTGCTTTTGTTTTGCATTA TTGCAGAATGTTAGCTCTGATATTTTGGGTTTCACCGGTGATGAAGCTACAAGAAAGAATTTGAAGTTACTTATCAAATC TCTCAGCCGGTTATTGTGAGGTCAAATTCCAATTTAATAGGATATAGTTCGATTAGGCTATTCCAATGTTTTTCAGCAAC CACAACACTGAAGTGATAAAATAGCAATTTCTGACTGGTTGTTTCCAAGTGTGTTTTTCTTGGTTTTCACTGAGGTGCAG ATCGTTTTTTGACTGGGGCAGCTGATTGCTATGTTCATATCCCTATTTTACTGTCGAACTTATGTGATTCATATGTGTAG CTTGGTGAATCTTGATAGTTGTCAGCTAAAATGCCCTAATAGAGTGAGTACAATACAAGCTTATAGTGTTCCTGGTGTTT CATCTATGAGGTTTCAGTTATGTGTGCAGTTTTCATGTTTCAAGTATAAAATTGATTGGAGCTGAACCATTTGGCTTTTT GATATCATAGGAAGTTGATGATCCATATTGCAGAACTTCCTTTTTTTTTACCCTTTGTTTCTTAAATGAAGTGGATAAAT ATAAAGCTTTGTTCCACTTGAAGTTTAGAAGGCAATAGACATTTGGAAGCCATGCGTCAGTCTTCTGTTGTGAAATGTCT TTCAGTCAATGCATGATTTCATCGAGTAATTTAGAAACGTTTTGCATTATGATTGCTAGAAATACTAGACCTTTTCATTG CTTTTGCAAAGTGCTTAATGTTTTTCCTATAAAGATGGATAATATTAGAATTGCAATTCCGGGGAGAAATCTTAGTAAAC TATCAGCTTCCGCATGAAAT
CDS sequence (LotjaGi6g1v0189600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGAAATCCTCTAGTGCATGTCTCAACACTGCCAAGTGCTTTATCTTCATCTGTGATTACTCTACGAGGAAGTTC TTTAAATTGCATACCCTGCCTTCCATTAAGGCCCCAGAGTAAAAGCAACCGAATCAGAGCTTCTTCTGCAGATGCAGGGC AGGTTGAACCTTCGTCTGCTTCAGGTTCAAAGAATCCTCTTGCAGTTGTTTTGGACATCCCTCGTACTGTCTGGAGACAA ACATTACGTCCATTAAGTGATTTTGGGTTTGGTGGCAGGAGTATTTGGGAAGGTGGGGTTGGACTATTTTTAGTTTCTGG TGCAGTTTTGTTTGCACTTAGTTTGGCTTGGTTGAGGGGTTTTCAAATACGATCCAAGTTCAGGAAGTACACTACAACTT TTGAGTTTGATCAGGCTTGTGGTATATCCACTGGGACACCGGTGAGGATTAGAGGGGTAACTGTTGGCGATGTGATTCGT GTGAATCCTTCTTTGAGAAGTATTGAAGCAGTTGTTGAGATTGAAGATGACAAAACCATCATACCACGGAATTCATTGGT TGAAGTTAACCAGTCAGGTCTTCTTATGGAAACTATAATTGACATTACTCCTCGAGATCCTATTCCAACGCCTTCAGCTG GACCTCTCGACCAAGAATGTATTAAAGAAGGTCTCATTGTGTGTGATAGAGAAAAGATTAAGGGTCAACAGGGCGTAAGT TTGGATGCATTGGTTGGGATATTTACCCGCATTGGGAGAGATGTAGAGAAAATTGGTGTTGCCAACACCTATTCGTTGGC TGAAAGAGCTGCTTCTGTTATTGAAGAAGCAAAACCACTTCTTACAAAGATCCAAGCCATGGCTGAAGATGTTCAACCTT TGTTAGCTGAAGTCCGTGATAGTGGCCTTTTGAAGGAAGTTGAGAGTTTAACCCGAAGCCTTACACAGGCCTCTGAGGAT TTGAGAAGGGTGCATTCATCCGTTATGACCCCTGAGAACGCGGAACTGATCCAGAAGTCCATTTACAGTCTTATTTTTAC CCTGAAGAATGTTGAGAATGTTAGCTCTGATATTTTGGGTTTCACCGGTGATGAAGCTACAAGAAAGAATTTGAAGTTAC TTATCAAATCTCTCAGCCGGTTATTGTGA
Protein sequence (LotjaGi6g1v0189600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGNPLVHVSTLPSALSSSVITLRGSSLNCIPCLPLRPQSKSNRIRASSADAGQVEPSSASGSKNPLAVVLDIPRTVWRQ TLRPLSDFGFGGRSIWEGGVGLFLVSGAVLFALSLAWLRGFQIRSKFRKYTTTFEFDQACGISTGTPVRIRGVTVGDVIR VNPSLRSIEAVVEIEDDKTIIPRNSLVEVNQSGLLMETIIDITPRDPIPTPSAGPLDQECIKEGLIVCDREKIKGQQGVS LDALVGIFTRIGRDVEKIGVANTYSLAERAASVIEEAKPLLTKIQAMAEDVQPLLAEVRDSGLLKEVESLTRSLTQASED LRRVHSSVMTPENAELIQKSIYSLIFTLKNVENVSSDILGFTGDEATRKNLKLLIKSLSRLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 382 | 382 | 2.7E-206 | – | |
| Phobius | 1 | 94 | 94 | - | – | |
| PANTHER | 1 | 382 | 382 | 2.7E-206 | ||
| MobiDBLite | 45 | 64 | 20 | - | – | |
| Phobius | 95 | 118 | 24 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 119 | 382 | 264 | - | – | |
| Pfam | 129 | 204 | 76 | 3.8E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0189600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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