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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0200400 |
| Transcript ID | LotjaGi6g1v0200400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar processing enzyme; TAIR: AT1G08750.1 Peptidase C13 family; Swiss-Prot: sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase; TrEMBL-Plants: tr|A0A0S3SCH0|A0A0S3SCH0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0200400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49710516..49712758) extracted from Lotus japonicus Gifu genome v1.2.
TTGTATCTTTTAGAGGATGATTGTTTTGCCTGCAATCCCTCAGGTAGATTATCGTGGCTATGAAGTGACTGTGGAAAACT TTCTACGGGTACTAACTGGTCGTCATGAGACTGCAGTTCCAAGGTCCAAACGACTTCTTAGTGATGAAGGAAGTCATATC CTTCTGTATATGACTGGGCATGGAGGTGATGAGTTTTTGAAGTTTCAGGATTCGGAAGAGCTTCAAAGTCATGATTTAGC TGATGCTGTGAAGCAAATGAAAGAGAAGCGCAGGTATGTACTTTTTGTGACTTTTGAATTTTAAACTGGATACATGAAAT GAGAAATTTTTTTTTAATGAAAAAAGTAAAATTTATCTAGGCGTTGGTAAAGACTTAATGAGAAGGAAAGATAATGATTC TTCTTAACCAAAGTACTGAACAGAAAACAACAAAGATAAAGTAGAAATCAATAGTCTTAGCCAGTCCTTCAACGTATAGA CTAAAGAATAGAACTCTGACTAAACATGCTTGTCATTATTGAAAATATGGATGGTTACCTTATGATGGAGATTCCACTAG TCAAATATGGTTCAATGAGTACAGGATAATCATTTGGAAAATACTCTATGATACTTGAACACATTGTCATTAATTTATGA AGGAGTCTTACTGTTTTAGTTGGCTTTATATATATCAAGGATTGACATTTTTTCTGATCATAATCTTTTACAAAGAACTA ATTTTTTGTTCATAATGGGATTTTTAAGGTTTAAAGAGCTGCTGATAATGGTGGACACCTGCCAAGCCTCGACACTGTTT TCACAGGTAGCATTACGTTTTAACTGAAGGTTTATGTTTCTAGAAAGCTGCTATGCTAATTTTTTTGAAATAATAGTGTA GTGATAATGTGATATTGAGTATTCATTGTCCAGATTCAGTTAATAGTACCATTGAAGTACAAAATGTTAGTCTCAGAGTT GATATTTGATTGAGCACCAACTGAAATTAGTGTTTCATTTGATGTTTATCATAATTTAAAACCGAATTTTACAAATTCTA CGGCAAGGATGCTGTCCCAAAGTTGAGAAATTCCTAGTGAACTATGTCTGCGCTACCAAATACACACATAATAGCTACCT CTAAACTCTACCTACATTCTATACTTGGACTAGGAACACATAACTGCTATGAAACTGTCTCATGTAGTTAGATTCATAAT TCCGACATGAAGGGCCTAACTACTGCAGAACTGTCTTGTATAATTGAATGCATAACTGTGCTACATTACTGCCGCATGGG AGAGTTCTACATCCTATGCCCCTTTCAAATCCCATCAGCAGAGAAGGGAGAAACATTAAAGTGATACAACGGGCTTTGGG TTTTCTTATGTGTTGAATCTCTTTAATGTTCCTCCCCTCCCTACTTTTCTGACTCTTCGATGGTTAAAAGTACAACTTTT CTTGTTTTCTTCTTTTCTTTCGGTGACCCTCTCTTCAAAAGAAGAGGGGATGGATTTTATGTTTAAAAACCCTTCTGAAT CGAATTTCTTAAGGCCAATAACCATCGTGCTGAGCCACCATAGATTTATTAAAAGAATCGACCAATCTCCCACTTGGCCC ATGCAGTGACCTGTGATTCAACAGTGAACTATAGGTGCATACCATACATTGAAATTATCAAGTCATCATTCTTTGTTGAA TTGAAATGATCTGAGGTCATAATTGTCCACCTGAAATTTATCATTACTTATTTGATAATATGATTGCTTTTGTCTAACAT TTTTGTTGTTGCTGATGGTGTTCTCCTTTTTCTGAGCTTGGCAGCTTCAATCCCCAGGTGTTTTGACAATTGGAAGTAGC ATGAAAGGAGAGAATTCTTATTCACATCACTTGGATTCAGATGTATGTATGAATTCAATACTGTTATGATTCGCTCCAGT TTATTCATTGCATTTCTTCATGTTTAGATTCAGGTGCTGCATGACTAAAATTGTCTTTTGTACTCATTCTTGTAAATATA ATTCAGGTTGGTGTTTCAGTTGTTGATCGTTTTACATTCTACACTCTTGCCTTCTTTGAGAGGCTGAATATGTATGACAA TGCTTCATTGAGCAGGTACATGAAAACATTTTATAAGCTGTTTCAGGTCTCTAAGTATGTCATTCTTTCTGCCCAGTGTA TATATAGTATGTGTGCTGTCTTTTTGCATGTTCTTTTAATTGAATTTTACAATCCAAATTTTTGTTGCAGTTCTGTTTAT TAG
CDS sequence (LotjaGi6g1v0200400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGTTTTGCCTGCAATCCCTCAGGTAGATTATCGTGGCTATGAAGTGACTGTGGAAAACTTTCTACGGGTACTAAC TGGTCGTCATGAGACTGCAGTTCCAAGGTCCAAACGACTTCTTAGTGATGAAGGAAGTCATATCCTTCTGTATATGACTG GGCATGGAGGTGATGAGTTTTTGAAGTTTCAGGATTCGGAAGAGCTTCAAAGTCATGATTTAGCTGATGCTGTGAAGCAA ATGAAAGAGAAGCGCAGGTTTAAAGAGCTGCTGATAATGGTGGACACCTGCCAAGCCTCGACACTGTTTTCACAGCTTCA ATCCCCAGGTGTTTTGACAATTGGAAGTAGCATGAAAGGAGAGAATTCTTATTCACATCACTTGGATTCAGATGTTGGTG TTTCAGTTGTTGATCGTTTTACATTCTACACTCTTGCCTTCTTTGAGAGGCTGAATATGTATGACAATGCTTCATTGAGC AGGTACATGAAAACATTTTATAAGCTGTTTCAGGTCTCTAATTCTGTTTATTAG
Protein sequence (LotjaGi6g1v0200400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVLPAIPQVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQ MKEKRRFKELLIMVDTCQASTLFSQLQSPGVLTIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFERLNMYDNASLS RYMKTFYKLFQVSNSVY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 175 | 172 | 1.3E-46 | – | |
| PANTHER | 9 | 169 | 161 | 8.0E-103 | – | |
| PANTHER | 9 | 169 | 161 | 8.0E-103 | ||
| Pfam | 9 | 150 | 142 | 1.8E-25 | ||
| PRINTS | 11 | 26 | 16 | 7.1E-16 | ||
| PRINTS | 38 | 57 | 20 | 7.1E-16 | ||
| PRINTS | 87 | 103 | 17 | 7.1E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
Expression pattern of LotjaGi6g1v0200400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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