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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0203800 |
| Transcript ID | LotjaGi6g1v0203800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY transcription factor; TAIR: AT4G30935.1 WRKY DNA-binding protein 32; Swiss-Prot: sp|P59583|WRK32_ARATH Probable WRKY transcription factor 32; TrEMBL-Plants: tr|K7KWJ7|K7KWJ7_SOYBN WRKY transcription factor; Found in the gene: LotjaGi6g1v0203800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50117636..50122570) extracted from Lotus japonicus Gifu genome v1.2.
ACTCTGTAAAGCAACAGAGAAAGAGAGAGAAAGAAAGAGTCAATACCAGTCAAAGACACATATACCCCAAACACAAACAC AAACACACAACAACAAAGTACACAACACAACAACACACACACTTCACACCTCGCTTTAAAGCAAACACATGAAACAAACA CTCTCATAAATCAATCGAAACCTCAATCAAATCAAATCAAAATTCAAAACCAAACAACACACAAAATGAATTAAGAGAAT TCATCAGAATCAGACCATGGCCGAGACGGCGACTCCACGACTCACTCACTCGCCGCCGCCGCCACCATCCACCGAGTTAC GCACTTCCAGTCCTCCCGATGAAGCGCAGCCCAATTTGGAAACCCTAGCTACCCCCTCTTCGCCACCGCGCCATCACACC GATCGTACGTTGCGTTTCAATTACTCTCTTTCTCGTTCAATTTTTTATGAAAGTAGAATAATAGTGTGTTGTTGATGATG ATCCTGCAGATTTGCAGGGAAGCTCCACCGCGCCTGAGAACGGCAAAGATGAAACTGAGGTTAGTGCATTTCTATGTTTT TTTATTAATTAATTCAACTGGAATGTTTTTTATAGAATCTTTTGACTTGAATTTAAATGCTTGTTTTGCTGTTTGATTGT TTTGACTTTTCATGGATTCTTTGTTAGTGCTCTGCTTGCGATCTCAGCTATCTTGTGAGAGATACTGCAATTTTGCTTAG TTTAACATGAATTCCAGTTCTTATTGCAAGAATCAAATAACAAATAGTATAGTTAATGTAGTTTATAACATTGAATTTGT TCTCAATTTATATTAACTTTCTGAAGTTACCATTAACCCACTTTTCTTAATTTATTTTCATCATTAATGTATAGGAGACT GGAAAGGGAGAGAGAGTCCAATTTAATAAAGGGTATTCGTGTAAGAAAATAATTAATGCACTACGCACTTCAAGTTGGTT TTTATAAAAAGGAACAAACTATACCTCAAATTTGGTTCTTATAATAAGTTCCGGAGGGAGTAAATCTGGGTCTAACCCAT TTAAGGATCGATGCTTGTTGTTTAAGTTTTTTTTTTTTGATAAGCAAAGCAATATATTGATGAGCACAAGGGGTGCTAAC CCATATACAAAGGGGAAGAAGAGGAAAAAATAAGAACAACATCACCTAACAAGCTAAGATTGAAAACACATGTAACAAAC CAAAAAAACCAGCAATAGATACCCCCAAACAGCACCTTACACTGCACTTAACCATCGTACCAGACCTCCTAACCCCCAAA CATGACAGTTGCAGCACTTCCATACTAAACCAGAAACTTCCAACACTGACCATCCAAACTGAGACCAGCCGAATCCCACA GCAACTAGAGAGAATGCAAGCATGCCGCTTGTTGTTTAAGTTATTATGAGTTGCTAAATGTATAGGTTTACTGGATTTTT CTGTCTCTGCTTGAAAGTTGTATCTATCATAAACTCTGAATGAAGTGCATCTATTCCTCAGTTTTTTTTCCTTTTAAAAA ATTGGGTTTACATTTTAGAAAAGATAACAACGCGATTGAAACTTGCAACAGGACGGTAGAGATGGGTAAGTTATTCCAGA CAAAGCCTTTTTGGGCCTTAAAAACATTAATAGAGGCCTACAAACTAGGGACTGCATGAAACTTGAAAGAAATTGTGGTG TCAAATCCAAATTCTGACTATAGGATAGTTTCATAATAATCCAATAATATACCATAGAGATATGATGTTGGAGCAGCGGA AGCATGTTACAAATTAACCACCATTTAATATATGAATAATTCTTAGAGGTCTTCACCCTAGCAGTTTAAGCTTCCAAAAG TCTTCACTTTGCAGTTCGGCTTCCTGTCTCAACAAGTTTATGGATTCAAAAAGTGTGTATGCTTGTATGAACAATAGAAA TCATCCAGTCATGAATGGTGATTTAAAAGTGCAGTGAACAAAACTAATTTTCTTAATAATACCTCCCAGGTGGGGAACAC AAGTTTTATTAAGAGAGTAGCCATTTGATTGCTTACTTGATGAACCATAACCAAGATAACTTTTAATATTTTTCAATTCA AATTAAGCTTAAGAAAGTTCCACGTTCTGTACATCCCATATTTTTTGTTTCCTTAGCACTGAAGTACTCTGTTTTATGCA CAGGCGCCAGCCAGGCCTCCAGGCAATGAAATTATTGTAAAGGACGCAGTTGAGGAACCTCAAGTGGAAACAAAGAACCA ACTCCAGGCGTGTTCAACTCCATTGTCTGCCCCTAGTCCAATGGTACCAGAACAGAGACTTTCTCCTCCAAAGGCTACCA GTGTATATGTGCTGGAAGTAGACAAAACAACTCCTTCAAGTGGTACAACTTTTTCTTCTGTTCCTGTTGCAAGGTCATCT GCAACCGATGGATATAATTGGCGGAAGTATGGTCAGAAGCAAGTGAAAAGTCCTATTGGTTCTCGAAGCTATTACAGGTG TACTCATTCAGCTTGTTGTGCTAAGAAGGTTGAATTCTGTGACCATTCAGGTCATGTGTCGGAGATTGTATATAAAAGTC AACACAGTCATGATCCACCACATAAAACTAATCCTGCTAAGGAAAGTAAGTCCCTGGCTTCCAAGGAACCTAATGTAGAA AACACCGTTCCAAAGCAGTCTGTCAAAGTTCTAAATGATTCTGATCCATCACCTTCTCCGAAAAACCCTCTTCAAGAAGC ACCTCGCAATCCTGATAAGAAACGACAAAACTCATCTGACAGTGGGAATGGTAAAGTTACTTTTAAGGAAGAGGATATTA ACGAGCCAGAGCTGAAAAGAAGGCAAGTTGCATATGCATTCATTTTCTTCATAGGAAAATAATTTTAGAGAAAGCATTTT TCCTTCTGGGGCATGATCTAGCAATTTGATGCTCTTTCCTTTAATTTGTTAACTAGAATGAAGAAAGATGATTCAACATG CTTGGATTCACCAATAAAATCTGGAAAGAAACAAAAGTTTGTTGTACATGCGGCAGGGGATGTGGGGATATCAGGTGATG GGTACCGATGGCGCAAGTATGGACAAAAAATGGTGAAGGGGAAACCTCATCCCAGGTGCATTGCTGTTTGTTTTTGGCTC TCATTTGCATTTTATTTTCAATTTTGTTCTTGATGTAATCAGTGGCTCTTGATGAAACTGTTGAAATTTGAGTTATACCA TTTAACGGATTTTACATAAACAAAAGCCTTGTCCCACCAAGTGAGGTCAGTTATATGGATCACATGATAAATTATAAAAA ATGAAATTATAGAATCTGATAAACAGAGGAATTTATTTACTTGCAAACTGATATCTGAAAGACTAAGATGCAAATTCCTT TAATGATTTTCAACTAGTGCTTTATTTACTTTTGCCAGTTTTAAAAATTCTTAGAAGTTGGGTTGGGCCAAGCTTTAATT CAAAGGCTAACTCATGAGTTAAGGATTGTTCAAAGCATGTATTTGCTCTACTTTGGCCATATCTATCTTGATGTGGGATC TCAACAAAAATAATGCCCATATTCATCATTCTTTTCTTCTGTTGTCTTTGTTATGTGGTGTTTGTAGCTGCACTACCGAG CTTTATAAATAAAAAGGGCTACTGTGTCTGTTAGGGTATCAAATCTTCAAAATCTGTTGCATGTGGTATTGAGTTCTTAG GAGCCCATTAGAGCAGTAGAGCTTAGGATTTTGTGCTCTTTTCAATATTGTTGTGGTCTAACCTATAACATGGCTTTAAT CCATCTATCTTCCAATATGGCTTGGGTTTACAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGCCCGGAAGCACA TTGAGACTGCTGTGGATGACTCGAACGATGTCATCATCACATACAAGGGAGTACATGACCATGACATGCCTGTGCCTAAG AAACGACATGGCCAGCCAAATGCTCCACTCGTGGCTGCTGCAGCACCTGCTTCAATGAGCAATTTGCAGCTCATGAAAAC TGACTCACCAAAAAACCAGAAAAATTCTCAATGTTCCGGGGAAATTGGTGGAGAATTAACTGGGGAAGCCTCGGAACTTG GTGGTGAGAAAGCAATTGAATCAGCTCGAGCTCTTCTGAGCATAGGTTTTGAAATTAAACCTTGCTGAATACATGTTTCA GAACCGGTACAATTGTATCTATATAAATTAATTGGTAGAGGTCTCATGTAATTTTAGTGGTGTCCCATGTATAAATTATT TCTTGAGTTCCCCCCCCTGCGTAGTAGTGGAACAATTCATGTATGTGCTTGCATGTCTGAAACAGTTGGCTTAGTAGAGC AAATATAGAATTGATTTGTAGCCTTTATTCAGTTATTCTCCTGGAGAAGTGAGATCAGGTGAAAACAGCATTATCATTCA ATTTCTCGTCTGAGACGGATGATGGCGGTGACACAGATCAAATAAACATGTTTTGGTCAAGTTGATGGGAAGAAGAGGTA TGTGTTTTAAATCAAAATATTTAGTTTTAAAAAAATTATTTGAAGATGTACATGGAATCATGGATGATGGACTAACTTAG GCGTGCATTTGATGAGATGGAGCCATGGAGGGATGTACGCATTAGCTAAACTGCAACTGATTTAGTCATGACTCTAGTGA ATGTTGAATATGGCTGAATGATATAAACCTCATTCTCTCCTACTCTATTTCTCTCTTCTTCCCCTGGAATGAGTATGAAT ATTGTTGCGCCGTGACAAGTACCTTGAAGCACAAATTTCAACGGATTCAGGGGCAAATTCTAACTGGTGGTCTCCCCCCA CACCAAGATTAACACAGGTACGATCTGACCGTGTACTCGAGGCATGGTGAACCACCACTAAGATAGTTTTTGGCCTCTCT TGTGTGAACATGCTGGAAGAGTTATGCAACCATGGAGCCAACACAATCAAAGGCC
CDS sequence (LotjaGi6g1v0203800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGAGACGGCGACTCCACGACTCACTCACTCGCCGCCGCCGCCACCATCCACCGAGTTACGCACTTCCAGTCCTCC CGATGAAGCGCAGCCCAATTTGGAAACCCTAGCTACCCCCTCTTCGCCACCGCGCCATCACACCGATCATTTGCAGGGAA GCTCCACCGCGCCTGAGAACGGCAAAGATGAAACTGAGGCGCCAGCCAGGCCTCCAGGCAATGAAATTATTGTAAAGGAC GCAGTTGAGGAACCTCAAGTGGAAACAAAGAACCAACTCCAGGCGTGTTCAACTCCATTGTCTGCCCCTAGTCCAATGGT ACCAGAACAGAGACTTTCTCCTCCAAAGGCTACCAGTGTATATGTGCTGGAAGTAGACAAAACAACTCCTTCAAGTGGTA CAACTTTTTCTTCTGTTCCTGTTGCAAGGTCATCTGCAACCGATGGATATAATTGGCGGAAGTATGGTCAGAAGCAAGTG AAAAGTCCTATTGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGCTTGTTGTGCTAAGAAGGTTGAATTCTGTGACCA TTCAGGTCATGTGTCGGAGATTGTATATAAAAGTCAACACAGTCATGATCCACCACATAAAACTAATCCTGCTAAGGAAA GTAAGTCCCTGGCTTCCAAGGAACCTAATGTAGAAAACACCGTTCCAAAGCAGTCTGTCAAAGTTCTAAATGATTCTGAT CCATCACCTTCTCCGAAAAACCCTCTTCAAGAAGCACCTCGCAATCCTGATAAGAAACGACAAAACTCATCTGACAGTGG GAATGGTAAAGTTACTTTTAAGGAAGAGGATATTAACGAGCCAGAGCTGAAAAGAAGAATGAAGAAAGATGATTCAACAT GCTTGGATTCACCAATAAAATCTGGAAAGAAACAAAAGTTTGTTGTACATGCGGCAGGGGATGTGGGGATATCAGGTGAT GGGTACCGATGGCGCAAGTATGGACAAAAAATGGTGAAGGGGAAACCTCATCCCAGAAACTACTACAGATGCACTTCTGC TGGATGTCCTGCCCGGAAGCACATTGAGACTGCTGTGGATGACTCGAACGATGTCATCATCACATACAAGGGAGTACATG ACCATGACATGCCTGTGCCTAAGAAACGACATGGCCAGCCAAATGCTCCACTCGTGGCTGCTGCAGCACCTGCTTCAATG AGCAATTTGCAGCTCATGAAAACTGACTCACCAAAAAACCAGAAAAATTCTCAATGTTCCGGGGAAATTGGTGGAGAATT AACTGGGGAAGCCTCGGAACTTGGTGGTGAGAAAGCAATTGAATCAGCTCGAGCTCTTCTGAGCATAGGTTTTGAAATTA AACCTTGCTGA
Protein sequence (LotjaGi6g1v0203800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETATPRLTHSPPPPPSTELRTSSPPDEAQPNLETLATPSSPPRHHTDHLQGSSTAPENGKDETEAPARPPGNEIIVKD AVEEPQVETKNQLQACSTPLSAPSPMVPEQRLSPPKATSVYVLEVDKTTPSSGTTFSSVPVARSSATDGYNWRKYGQKQV KSPIGSRSYYRCTHSACCAKKVEFCDHSGHVSEIVYKSQHSHDPPHKTNPAKESKSLASKEPNVENTVPKQSVKVLNDSD PSPSPKNPLQEAPRNPDKKRQNSSDSGNGKVTFKEEDINEPELKRRMKKDDSTCLDSPIKSGKKQKFVVHAAGDVGISGD GYRWRKYGQKMVKGKPHPRNYYRCTSAGCPARKHIETAVDDSNDVIITYKGVHDHDMPVPKKRHGQPNAPLVAAAAPASM SNLQLMKTDSPKNQKNSQCSGEIGGELTGEASELGGEKAIESARALLSIGFEIKPC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 115 | 115 | - | – | |
| MobiDBLite | 23 | 61 | 39 | - | – | |
| PANTHER | 72 | 449 | 378 | 1.3E-145 | – | |
| PANTHER | 72 | 449 | 378 | 1.3E-145 | – | |
| MobiDBLite | 87 | 104 | 18 | - | – | |
| Gene3D | 131 | 206 | 76 | 5.1E-21 | ||
| ProSiteProfiles | 141 | 205 | 65 | 17.752 | ||
| SUPERFAMILY | 145 | 205 | 61 | 9.94E-20 | ||
| SMART | 146 | 204 | 59 | 3.1E-23 | ||
| Pfam | 148 | 203 | 56 | 5.2E-17 | ||
| MobiDBLite | 197 | 298 | 102 | - | – | |
| MobiDBLite | 197 | 214 | 18 | - | – | |
| MobiDBLite | 220 | 245 | 26 | - | – | |
| MobiDBLite | 252 | 297 | 46 | - | – | |
| Gene3D | 302 | 379 | 78 | 6.4E-29 | ||
| ProSiteProfiles | 313 | 378 | 66 | 31.502 | ||
| SUPERFAMILY | 314 | 378 | 65 | 8.5E-27 | ||
| SMART | 318 | 377 | 60 | 1.3E-32 | ||
| Pfam | 320 | 376 | 57 | 1.2E-23 | ||
| MobiDBLite | 408 | 423 | 16 | - | – | |
| MobiDBLite | 408 | 428 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi6g1v0203800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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