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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0203900 |
| Transcript ID | LotjaGi6g1v0203900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purine permease-related family protein; TAIR: AT2G24220.1 purine permease 5; Swiss-Prot: sp|Q9ZUH3|PUP5_ARATH Probable purine permease 5; TrEMBL-Plants: tr|I1LT42|I1LT42_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0203900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50135780..50138247) extracted from Lotus japonicus Gifu genome v1.2.
AGTATTAGGATATAGATTCTGGCTGCTATCAAACCACGACATGAATAAGCTAAAGTGCGACACAAATTCTTATTTCTCGT ATTTTATTTTCCCAAACAAGATTATATCGCATTTAATAACATCATTATAGTACATAGTTTCGTGAAACAAACGTTTTTCT ATTATCGTAGTACTCAGCTCCGTTAAAAGTCAAGAATTCTTCTTCCCCAACCCGACTGTGATGTTGTCTGTGCCTCTGCT TCAAACTGGTTCGTCATCAGTTTCAATTTTTCTTTCTTGTCTTTCACAACTGTTCAATTTTCTTTTAAATTCTCGGAATC TCTGAAGAAATTGCACATTTTTATATCATGTATGGTTTGGATTTTATTATTATTATTCGTGAAAAAATGTGTCTTTCTGC ATTTAATTTCTATTTTTTTGTTTCCTATAACCTGGTACTGTTGTTACATTTCATTGGGGAAGCTATGACTTTGTTTTTTA ACTTGATGTTGTTGGAATTTGGAAAGATGAAATTTTGAATTGAGCAGAATTTGAGCTTCAATTATGTATTAGATTTAGGA CATGAACTGGATGTTAGGTGTTCTCATTCTTTATTTCTTTTGGTGTGTTAGGTGTTGTTATTAGGATTTAGGACATGAAC TGGATGCATTGGTCATTGAGCTACATTTATATTGTTAAATCATAATCCATGCTTTCCTAAATCTTAATTTATCTGATTTA GTAATTCCACTTCTTGTTCCATGAATTAAAGCCGTCATACTTTGTTTACTTCAAAGTGTGATGGCTTTAAGCCACTAGAA GGGGCTAATGGTGAGGGATTTAGGTTGTCAGCATTATGCCGAACGAAAAAAGTTTTGCAATTTTCTCTTTTTATCCATCT GATTTCCTAAGAGCAATTAATCACTGAGTTATTTATTATGATCCGTAACAGAAGAAGCTATGGAGGCAGCAGAAGAACCA ACTCCCGCTCCCTCAGATTCACTCTCGGGTCAGATATCCAAATTTGTGGTCATGTTAACCGCAACATACCATAGTAAGCC AATTCCTTATTGGATTCTTCTTGTTCTTGGCATCATAGCAATGCTCGTGGCGTTTCCAGCTTCCAGCATTCTGTCTCGTG TTTATTATGCTAATGGTGGCCAGAGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGTTGGCCTCTAGTTGCCTTGATC TTGTTTCCTGCATACTGCATTAATAAAACCCTCCCTACTCCTCTCACCTTAAAACTCGGTCTAGCGTATGTCGTTTTGGG TTTCCTAAGTGCTGCTGACAACCTCATGTATGCTTATGCCTATGCTTACCTCCCAGCATCAACCGCTTCATTAGTGGCAT CATCATCCCTTGTGTTTTCTGCACTTTTTGGATACCTTCTTGTGAAGAACAAAATCAATGCTGCAATGATAAACGCTATC TTTGTCATAACTGCTGGATTAACCATCATTGCCTTGGATTCAGGTTCAGACAGATATGATAATGTCAGTAACAAGGAATA CATCATGGGATTTATATGGGATGTTTTGGGATCTGCCCTTCATGGGCTTATTTTCGCTCTCTCGGAGCTGGTTTTTGTGA AGTTACTGGGAAGAAGATCCTTCATTGTTGTGTTGGAACAGCAAGTCATGGTTTCGCTGTTCGCATTCCTGTTTACCACA ATAGGGGTAATCGTGAGTGGTGGTTTTCAAGGAATGGCATCTGAAGCTACCACTTTCAAAGGTGGTAGAAGTGCCTATTA TCTTGTTCTCATATGGAGCGCCATCACTTTTCAAATGGGGGTGCTGGGAGCCACTGCAGTAATTTTCTTGGCTTCTACTG TGCTAGCAGGTGTACTCAATGCTGTGAGAACACCGGTAACAAGCATTGTAGCTGTTATCCTGCTACATGATCCAATGAAT GGTTTCAAGCTCCTCTCTCTCTTGATTACCTTCTGGGGATTCGGCTCATATATTTATGGAAGTTCTATGGATGAAAAATC ATAAGAATTTGGCCCTAGATTCTAGCCCATTCAAATTCTCTCTGCAGAAGTTCTAGGGTTAAACCGTGAGACAGTAACTT GTGTGGGAGTCCTATATATTAATTGTGTGTTACGTTCAAGAAAAATTGTATATTGAATTTGAATTTCACTCATGATTAAG GAATTGCATCAAAATATTACGTTCTATCAAAATATTACGTTCTATCATTGCTCAGATTTTGTCATTCCTAATGTCAACTC ATGCAGTTCATTTTTAGAATCTCCTCCCCAATTTCCAGAGTATCATATTGTCAATCAACTACATAATAAAATATAGTCCT CAGATTGAAATTGAGAATACTCCTTATTATACTCACTTCTTCTGTAAGACACGTGATTTTACTATTGTGAACACTTATTT TTTTATAGAACCCTCTAAGGATGAGTAGCAGTTAATTATTCTCTTCAGGAGGTGACTGTCCTTGTTTT
CDS sequence (LotjaGi6g1v0203900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGTCTGTGCCTCTGCTTCAAACTGAAGAAGCTATGGAGGCAGCAGAAGAACCAACTCCCGCTCCCTCAGATTCACT CTCGGGTCAGATATCCAAATTTGTGGTCATGTTAACCGCAACATACCATAGTAAGCCAATTCCTTATTGGATTCTTCTTG TTCTTGGCATCATAGCAATGCTCGTGGCGTTTCCAGCTTCCAGCATTCTGTCTCGTGTTTATTATGCTAATGGTGGCCAG AGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGTTGGCCTCTAGTTGCCTTGATCTTGTTTCCTGCATACTGCATTAA TAAAACCCTCCCTACTCCTCTCACCTTAAAACTCGGTCTAGCGTATGTCGTTTTGGGTTTCCTAAGTGCTGCTGACAACC TCATGTATGCTTATGCCTATGCTTACCTCCCAGCATCAACCGCTTCATTAGTGGCATCATCATCCCTTGTGTTTTCTGCA CTTTTTGGATACCTTCTTGTGAAGAACAAAATCAATGCTGCAATGATAAACGCTATCTTTGTCATAACTGCTGGATTAAC CATCATTGCCTTGGATTCAGGTTCAGACAGATATGATAATGTCAGTAACAAGGAATACATCATGGGATTTATATGGGATG TTTTGGGATCTGCCCTTCATGGGCTTATTTTCGCTCTCTCGGAGCTGGTTTTTGTGAAGTTACTGGGAAGAAGATCCTTC ATTGTTGTGTTGGAACAGCAAGTCATGGTTTCGCTGTTCGCATTCCTGTTTACCACAATAGGGGTAATCGTGAGTGGTGG TTTTCAAGGAATGGCATCTGAAGCTACCACTTTCAAAGGTGGTAGAAGTGCCTATTATCTTGTTCTCATATGGAGCGCCA TCACTTTTCAAATGGGGGTGCTGGGAGCCACTGCAGTAATTTTCTTGGCTTCTACTGTGCTAGCAGGTGTACTCAATGCT GTGAGAACACCGGTAACAAGCATTGTAGCTGTTATCCTGCTACATGATCCAATGAATGGTTTCAAGCTCCTCTCTCTCTT GATTACCTTCTGGGGATTCGGCTCATATATTTATGGAAGTTCTATGGATGAAAAATCATAA
Protein sequence (LotjaGi6g1v0203900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSVPLLQTEEAMEAAEEPTPAPSDSLSGQISKFVVMLTATYHSKPIPYWILLVLGIIAMLVAFPASSILSRVYYANGGQ SKWIISWVAVAGWPLVALILFPAYCINKTLPTPLTLKLGLAYVVLGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSA LFGYLLVKNKINAAMINAIFVITAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGLIFALSELVFVKLLGRRSF IVVLEQQVMVSLFAFLFTTIGVIVSGGFQGMASEATTFKGGRSAYYLVLIWSAITFQMGVLGATAVIFLASTVLAGVLNA VRTPVTSIVAVILLHDPMNGFKLLSLLITFWGFGSYIYGSSMDEKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 46 | 46 | - | – | |
| PANTHER | 16 | 365 | 350 | 3.3E-184 | ||
| PANTHER | 16 | 365 | 350 | 3.3E-184 | – | |
| Phobius | 47 | 64 | 18 | - | – | |
| TMHMM | 47 | 69 | 23 | - | – | |
| Pfam | 52 | 365 | 314 | 3.2E-96 | – | |
| Phobius | 65 | 83 | 19 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Phobius | 84 | 106 | 23 | - | – | |
| SUPERFAMILY | 97 | 194 | 98 | 3.01E-11 | – | |
| Phobius | 107 | 117 | 11 | - | – | |
| TMHMM | 118 | 140 | 23 | - | – | |
| Phobius | 118 | 141 | 24 | - | – | |
| Phobius | 142 | 146 | 5 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 147 | 167 | 21 | - | – | |
| Phobius | 168 | 173 | 6 | - | – | |
| Phobius | 174 | 191 | 18 | - | – | |
| TMHMM | 174 | 193 | 20 | - | – | |
| Phobius | 192 | 210 | 19 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 211 | 236 | 26 | - | – | |
| Phobius | 237 | 247 | 11 | - | – | |
| Phobius | 248 | 272 | 25 | - | – | |
| TMHMM | 250 | 272 | 23 | - | – | |
| Phobius | 273 | 283 | 11 | - | – | |
| Phobius | 284 | 310 | 27 | - | – | |
| TMHMM | 287 | 309 | 23 | - | – | |
| Phobius | 311 | 316 | 6 | - | – | |
| TMHMM | 314 | 333 | 20 | - | – | |
| Phobius | 317 | 335 | 19 | - | – | |
| Phobius | 336 | 340 | 5 | - | – | |
| Phobius | 341 | 359 | 19 | - | – | |
| TMHMM | 343 | 360 | 18 | - | – | |
| Phobius | 360 | 366 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Purine nucleoside transmembrane transporter activity | Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0203900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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