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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0203900 |
| Transcript ID | LotjaGi6g1v0203900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Purine permease-related family protein; TAIR: AT2G24220.1 purine permease 5; Swiss-Prot: sp|Q9ZUH3|PUP5_ARATH Probable purine permease 5; TrEMBL-Plants: tr|A0A072TME5|A0A072TME5_MEDTR Purine transporter, putative; Found in the gene: LotjaGi6g1v0203900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50136596..50137783) extracted from Lotus japonicus Gifu genome v1.2.
GATTTAGGTTGTCAGCATTATGCCGAACGAAAAAAGTTTTGCAATTTTCTCTTTTTATCCATCTGATTTCCTAAGAGCAA TTAATCACTGAGTTATTTATTATGATCCGTAACAGAAGAAGCTATGGAGGCAGCAGAAGAACCAACTCCCGCTCCCTCAG ATTCACTCTCGGGTCAGATATCCAAATTTGTGGTCATGTTAACCGCAACATACCATAGTAAGCCAATTCCTTATTGGATT CTTCTTGTTCTTGGCATCATAGCAATGCTCGTGGCGTTTCCAGCTTCCAGCATTCTGTCTCGTGTTTATTATGCTAATGG TGGCCAGAGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGTTGGCCTCTAGTTGCCTTGATCTTGTTTCCTGCATACT GCATTAATAAAACCCTCCCTACTCCTCTCACCTTAAAACTCGGTCTAGCGTATGTCGTTTTGGGTTTCCTAAGTGCTGCT GACAACCTCATGTATGCTTATGCCTATGCTTACCTCCCAGCATCAACCGCTTCATTAGTGGCATCATCATCCCTTGTGTT TTCTGCACTTTTTGGATACCTTCTTGTGAAGAACAAAATCAATGCTGCAATGATAAACGCTATCTTTGTCATAACTGCTG GATTAACCATCATTGCCTTGGATTCAGGTTCAGACAGATATGATAATGTCAGTAACAAGGAATACATCATGGGATTTATA TGGGATGTTTTGGGATCTGCCCTTCATGGGCTTATTTTCGCTCTCTCGGAGCTGGTTTTTGTGAAGTTACTGGGAAGAAG ATCCTTCATTGTTGTGTTGGAACAGCAAGTCATGGTTTCGCTGTTCGCATTCCTGTTTACCACAATAGGGGTAATCGTGA GTGGTGGTTTTCAAGGAATGGCATCTGAAGCTACCACTTTCAAAGGTGGTAGAAGTGCCTATTATCTTGTTCTCATATGG AGCGCCATCACTTTTCAAATGGGGGTGCTGGGAGCCACTGCAGTAATTTTCTTGGCTTCTACTGTGCTAGCAGGTGTACT CAATGCTGTGAGAACACCGGTAACAAGCATTGTAGCTGTTATCCTGCTACATGATCCAATGAATGGTTTCAAGCTCCTCT CTCTCTTGATTACCTTCTGGGGATTCGGCTCATATATTTATGGAAGTTCTATGGATGAAAAATCATAA
CDS sequence (LotjaGi6g1v0203900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGAACGAAAAAAAAGAAGCTATGGAGGCAGCAGAAGAACCAACTCCCGCTCCCTCAGATTCACTCTCGGGTCAGAT ATCCAAATTTGTGGTCATGTTAACCGCAACATACCATAGTAAGCCAATTCCTTATTGGATTCTTCTTGTTCTTGGCATCA TAGCAATGCTCGTGGCGTTTCCAGCTTCCAGCATTCTGTCTCGTGTTTATTATGCTAATGGTGGCCAGAGCAAGTGGATC ATATCTTGGGTGGCTGTTGCTGGTTGGCCTCTAGTTGCCTTGATCTTGTTTCCTGCATACTGCATTAATAAAACCCTCCC TACTCCTCTCACCTTAAAACTCGGTCTAGCGTATGTCGTTTTGGGTTTCCTAAGTGCTGCTGACAACCTCATGTATGCTT ATGCCTATGCTTACCTCCCAGCATCAACCGCTTCATTAGTGGCATCATCATCCCTTGTGTTTTCTGCACTTTTTGGATAC CTTCTTGTGAAGAACAAAATCAATGCTGCAATGATAAACGCTATCTTTGTCATAACTGCTGGATTAACCATCATTGCCTT GGATTCAGGTTCAGACAGATATGATAATGTCAGTAACAAGGAATACATCATGGGATTTATATGGGATGTTTTGGGATCTG CCCTTCATGGGCTTATTTTCGCTCTCTCGGAGCTGGTTTTTGTGAAGTTACTGGGAAGAAGATCCTTCATTGTTGTGTTG GAACAGCAAGTCATGGTTTCGCTGTTCGCATTCCTGTTTACCACAATAGGGGTAATCGTGAGTGGTGGTTTTCAAGGAAT GGCATCTGAAGCTACCACTTTCAAAGGTGGTAGAAGTGCCTATTATCTTGTTCTCATATGGAGCGCCATCACTTTTCAAA TGGGGGTGCTGGGAGCCACTGCAGTAATTTTCTTGGCTTCTACTGTGCTAGCAGGTGTACTCAATGCTGTGAGAACACCG GTAACAAGCATTGTAGCTGTTATCCTGCTACATGATCCAATGAATGGTTTCAAGCTCCTCTCTCTCTTGATTACCTTCTG GGGATTCGGCTCATATATTTATGGAAGTTCTATGGATGAAAAATCATAA
Protein sequence (LotjaGi6g1v0203900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPNEKKEAMEAAEEPTPAPSDSLSGQISKFVVMLTATYHSKPIPYWILLVLGIIAMLVAFPASSILSRVYYANGGQSKWI ISWVAVAGWPLVALILFPAYCINKTLPTPLTLKLGLAYVVLGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGY LLVKNKINAAMINAIFVITAGLTIIALDSGSDRYDNVSNKEYIMGFIWDVLGSALHGLIFALSELVFVKLLGRRSFIVVL EQQVMVSLFAFLFTTIGVIVSGGFQGMASEATTFKGGRSAYYLVLIWSAITFQMGVLGATAVIFLASTVLAGVLNAVRTP VTSIVAVILLHDPMNGFKLLSLLITFWGFGSYIYGSSMDEKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 13 | 361 | 349 | 2.3E-184 | ||
| PANTHER | 13 | 361 | 349 | 2.3E-184 | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 43 | 60 | 18 | - | – | |
| Pfam | 48 | 361 | 314 | 3.0E-96 | – | |
| Phobius | 61 | 79 | 19 | - | – | |
| Phobius | 80 | 102 | 23 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| SUPERFAMILY | 93 | 190 | 98 | 4.18E-11 | – | |
| Phobius | 103 | 113 | 11 | - | – | |
| Phobius | 114 | 137 | 24 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| Phobius | 138 | 142 | 5 | - | – | |
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 143 | 163 | 21 | - | – | |
| Phobius | 164 | 169 | 6 | - | – | |
| TMHMM | 170 | 189 | 20 | - | – | |
| Phobius | 170 | 187 | 18 | - | – | |
| Phobius | 188 | 206 | 19 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 207 | 232 | 26 | - | – | |
| Phobius | 233 | 243 | 11 | - | – | |
| Phobius | 244 | 268 | 25 | - | – | |
| TMHMM | 246 | 268 | 23 | - | – | |
| Phobius | 269 | 279 | 11 | - | – | |
| Phobius | 280 | 306 | 27 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 307 | 312 | 6 | - | – | |
| TMHMM | 310 | 329 | 20 | - | – | |
| Phobius | 313 | 331 | 19 | - | – | |
| Phobius | 332 | 336 | 5 | - | – | |
| Phobius | 337 | 355 | 19 | - | – | |
| TMHMM | 339 | 356 | 18 | - | – | |
| Phobius | 356 | 362 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Purine nucleoside transmembrane transporter activity | Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi6g1v0203900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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