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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0204900 |
| Transcript ID | LotjaGi6g1v0204900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT1G56180.1 ATP-dependent zinc metalloprotease; Swiss-Prot: sp|A1TZE0|FTSH_MARHV ATP-dependent zinc metalloprotease FtsH; TrEMBL-Plants: tr|G7IQY1|G7IQY1_MEDTR Plant/F14G9-20 protein; Found in the gene: LotjaGi6g1v0204900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50207038..50212010) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGTTTTTTTTTTATTTAGATTAAACACAATCCTTGATTACAAAAATCAATGGTTTGTGAAGTTTTTACCCATGAAAG AAAAATAATAGATCATAGCTCAAAGCATCATACTCTATTCCAAATCAATAAGCACCAAGTTACATGGCTGTGCATATTTT CCCTCACTTTCTCGCTCTTTCTCCTCCATTTTCCCTCGGATTTCCCCGCGCCGCAACTCGTCGCGCTTTGCGGCCACGCA GAGCCTTGCGAGAATGGCGAGACTACGAGGAGGCAGTCAAGCGGAAGGACCTCGCCGGAGCTCTGAGATTCCTCAAGTCC CTCGAAACCGAACAACGCCCGTTCGCCGACGTGGAGGGCCCTTCTCCGGTGACCGAGTCGACTCAGTCCCGGTTCCGCGA CTTGGAGCTGTTTGGGCCGCAGAGGGATTGGGAGGTGCTGGACACGTGCTTGAATGCTGATGACATGAAGCTTGTTGGGA ACGCTTACAAGTTCCTTAGGGATAGAGGGTTCTTGCCCAATTTTGGTAAATGCAGGAACATTGGTGAGTTTTCATCATCG TCAGCTTCTTCTTACCAGAAAATGCAAATTGTTGTTTTTTATCATTTGGGTTGTTCAAAATAGACAAGCACATAATGCAA ATTGTTACTTTATTTAGATGGGTTCATAGGTTCAATCACATGATTTATGTTAGATATAAAACTTAGAGTGAATCCCAAAT TTATCCCTTGAAGATTTGGTGGTGGACACACTAATTTCCTAGAATGCATAAGATGCTTTGTAGTCTCTAAAAATTCTCAT ATGTTGTTCCTATTAGTTCCTAGGCGTCGGACAAATTAGTTCGGACTACGAATGTAGCTGATGATATATATTTGTGGTCA CATTAGTTCTTAAGAACAAATTTGTGGATTTGCTCCAAAAGATAAAACTTATCTTGTGTTGACAACATTAGCTTTTGGGA ATCGGGAGAGTTTGTCTCTAATATGAATGAGGGTCTCTGATATGATCGAGTGGTTTCCTTACCATCCACATTTGAATTTT GGCATAAGGTAGAGTGATGTGTTAGATATAAAAACAACGATGAGCTTTTGTTAACTTCTTAAACTCTTGAAAGAGTTGAT CCTCTGCAGTTTTGGTGAGATTTGCAAAGTGTAAAATGTAGTCTTGGTTTGTGTGGGATGCTAATTTTTGCTGGTATTCC TGGGATCTTTTGAGTTTTACTTTTATCAATCTAGCTGACATTCAAATATATGATACATTCAGAGTAATTGAGTTTCTTTT CTCTGCATCTTATAAGACTGGTTTTTTGTTCTATGTTACAATCTTTATTGGATACATGTCTTTTGAATTTTTCCAAATTG ATGTTGATTGGTGTGGCTTTCTTCTTGTTTGTTAGTTGTTTTCCATAATAATTATTTGTTGTGGCGAGTTAACTCTGCTA AAGCTTTTTATTGAACTTACTGGCTTTTTATTTCCCTATCTTGTATAGTTTTGGAGGGAACTAGGAAAGTAACACCAGAT GTCTTGAGATCGTCAACTGGTTTGGAAGGTGCACACATGAATTCCTGACAGATTATTTTCGTTCTAGCTGTAAATTGCTC AAAGTCCCAGTTTCAATCATGTTACATTGGAATGAGTAGCATTTTATTATTTATACAATTCTATGCTGCTGAAAAAATGG TTATTCAGTATAAGTATAACTTTTCCTTCTTTCTTTTGATATAGTGACTAAACTTTCTCCAAAGAAGTGGGGTCTCTCAG ACAGCTCAAGTGCTATTTTGGTTGCTTTTCTTGGCGGGGTATCCTTTCTAATTTCACAAGGAATTGACCTCAGACCCAAC CTTGCAATGATATTAGGTCTAGCCATTGCAGATTCTATATTCCTAGGTGGTACCTGTTTAGCTCAAATCTCAAGTTACTG GCCACCACATAGGCGCCGAATCCTCATTCATGAAGCAGGACATCTCCTGACAGGTAAAAACAATTTTATAAGAACTTTAG AAGTCACATATTGGGGATATTTGTTCTGGATCATGTTTCTTTCCCCATCACTCTGTGCCATATTAAAACATCTTACAAGG CCCATCCTAATGAAATTTCAGCTTACCTGATGGGTTGCCCAATTCGGGGTGTGATTTTAGATCCGATCATTGCAATGCAA ATGGGCATTCAAGGACAGGTATTTTTGCACTCTTTTGTTAACGATATGCCATATTATTTTTATTTGACTATTTTATCACT TTGACACAACTGTCATTTCATGTTAAATACTTGGTACTACTATATCTGCTCTTTGACGCGAACCTAAGACAATCCCTTAG GTGCAAAGTACTCCTCCGGCTCTCCACCCTCCCCCGTTTTTCTTTAGATGATTCCTCTCCTTTTTCTCTCCTTTCATGTT GTTAAAAGTCCCACATTGGCTAGGTGCTTTCTGGTCGCCGTGGCCTACAACATGAAACCCGCCATGCTCTTCATATGCCT TATTGTCAGCTTTCCGCTGTGGCACTGCTATGTCTTCCTTTTAACAATACTGGTTTGAGATATGATGAAACACTTTTGGT TATGCAAATTTCGACAAAAGCCTGTCTACTGCTCTACTACTATCCCTTTTTTTAATGCTAAAGCATATATAGTTGGTGGT GATTATGCTTCTATGGGTTCTTTCATGGTGTAATGTTATGAAGGTTTGCCTGTAAATTATCTTTGCTGTCTTCTGACTTC TTCTCTGTGTTGAACACTTCATCTATAGTGAAATAAAGGCTAACTCATAAGGGTATTTAAACAAAAGAGTTAGAACAAAA AAGGAAGGAAGTCTCTTTTTTCTTTTAGTCCTTCTCTTCAGGGTTTCTGTTTGTTCGCACTGAATTTTCTCATTCTTCTC TGGTACTAGTATAGTTTCTGTTGATTTTAGAAAATTGACTACAGACTGATTAGTTCATGGATGAGTTCACTGATCAAGCA GCCATGTCATCAGTAATGGATTCGTTGTATTTGCAATTTGCATGCACATGTATGCTGACATGTCACAAGTCTAGATTTCA TATCCAGTTCTTCTCCTTTAATTTCTATTTATTGTATTCTCAACTAAGTTTGTCTGTTAAATGTTTAATTTAACATCACT TTCGTTGCAGTAAATCTTTATTTTTTAGGCAGGGACTCAGTTTTGGGATGAGAAAGTTGCCAATGACCTTTCTGAAGGGC GACTTGATGGTACAGCTTTTGATAGGTGGGTATAACATTCTATTTATGGAGATATAATTCGAACCTAGCACTGGTTAAAG AGTTATGCCTGTAATTGAATTGCGCACTAGTTAGGGTGGATTTACTTTTTGATGTTTAGATGACATTAGTCTAACATCTT TCGTTCGATAAGCCTGACACTTTGTACATTATCTTTGTATTAGAATTTATAAAGCAAACTTTTTAATTAATCCTTGCTTT CAAAATTTTGTATCTCCTTTAGCCCAAGTAAAAGGTGTGGTCTGTGTCTGTATTTCCACCTAAGCTATATTCCCTGATTA ATTACAACTTTAAAAGTGAAGTTAAATGATGTTTTTCCTATCTTGTATCATTGATTCATGCTCCTATTTAAATTCTAGTC TTTATCTCTGTGTTCATTCACAAACTTGCCTTGAGATAACTGAAACAAGTTTGCCTGGAAGCTCTGGACGAAGTCCCCCC TGCCCATTATTTTATTTTTCTCTAGTTTCTCTTTTTGGAGCCTTTCAAGTGATATTGATGCTTTATGTGACCATTGCTTT AGGTACTGCATGGTACTTTTTGCTGGCATTGCAGCTGAAGCGCTTGTTTATGGTGAGGCAGAGGGGGGAGAAAATGATGA AAATCTATTTAGAAGCGTCTGTCTACTTCTTGAGCCTCCATTGTCTGTAGCTGAGGTTTTTCCAAACTGATGTTTCTCGT TTGATGGTTTCGTTTTCATCTGTGATGCTAAAATTTGAACCTTCATGTTCTTGCATTGAACAGATGTCTAATCAAGCAAG ATGGTCAGTTTTACAATCTTATAATTTGCTCAAGTGGCATAGAGATGCACACCGAGCTGCTGTTAAAGCCTTGGAAAGTG GTGGCAGCCTGAGTGTTGTTATTAGGAGGATCGAGGAGACTTTGTATTCCAAAAAATGAGCCTCAGAAGTTTATATAAAA GAAACAGTTTCTTTTTCCAAGTTGCTTACTGGTTAGTGGTTAACCACTTTTGTTCTTCTGTTATGGAATTATCAATGCAT GCTCACTTTTTTTCTTTTTTATATCTTTTGAGTAATTTGTTGTGTTCAGTTGGGACACGGTTAGCTTGATGGATCTGAAT TGTAGCCGGCTTTACTGGTTTTTATGTATGATTGCTGGTTTTGCAGATGCCTTACCGGTTGCACCTCATCTCCTACGATT AAAGATTAGAAGCAATCAAATGAATAATTTCTGATTCAGCTAGTGGCATTTTAGTTCACTTAGGAGGATCGTAAAGTTGT GCCTGACATGAATGATACATTGTGCCAGCAGAGATGTAGTCATTGTGAGAATGGCAGCTTTAGAGTCATTCTGAGTCATA CATAAGGTTTTCTGTTATTTTCACCTGCATAACAAACTGTGGTTGAAATCAATCCTAAGTTTTAGAAAATAGTTTGTAAA TGATAGATACCAGCAATGAACAGGAAGAAAGAATGTATTTTTTTAACAAGAATGATGTGAAACTACACTGAATTCCTGGA TATTCTAGAGATCCAGGGCTCTACCAAGTACCTTGTACGTGTTTAAGATTGGTTTTCCTCCATCTATTGTGAGGTTATTT TTTTGTATCTATTTTGGTTGGAATTTTTCCTATTGTTATTTCTTTAATGTTCTTTTTCCTCTTCCTCCTCCTCTGACTAT CACCTTTCATTCATTCTCCATCTCTATGCCATCACATCTAATCTTTTTCCGTGTTATCCTCAACCCGAGATATGTGGTTC AATTAAATGTGGG
CDS sequence (LotjaGi6g1v0204900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGCATATTTTCCCTCACTTTCTCGCTCTTTCTCCTCCATTTTCCCTCGGATTTCCCCGCGCCGCAACTCGTCG CGCTTTGCGGCCACGCAGAGCCTTGCGAGAATGGCGAGACTACGAGGAGGCAGTCAAGCGGAAGGACCTCGCCGGAGCTC TGAGATTCCTCAAGTCCCTCGAAACCGAACAACGCCCGTTCGCCGACGTGGAGGGCCCTTCTCCGGTGACCGAGTCGACT CAGTCCCGGTTCCGCGACTTGGAGCTGTTTGGGCCGCAGAGGGATTGGGAGGTGCTGGACACGTGCTTGAATGCTGATGA CATGAAGCTTGTTGGGAACGCTTACAAGTTCCTTAGGGATAGAGGGTTCTTGCCCAATTTTGGTAAATGCAGGAACATTG TTTTGGAGGGAACTAGGAAAGTAACACCAGATGTCTTGAGATCGTCAACTGGTTTGGAAGTGACTAAACTTTCTCCAAAG AAGTGGGGTCTCTCAGACAGCTCAAGTGCTATTTTGGTTGCTTTTCTTGGCGGGGTATCCTTTCTAATTTCACAAGGAAT TGACCTCAGACCCAACCTTGCAATGATATTAGGTCTAGCCATTGCAGATTCTATATTCCTAGGTGGTACCTGTTTAGCTC AAATCTCAAGTTACTGGCCACCACATAGGCGCCGAATCCTCATTCATGAAGCAGGACATCTCCTGACAGCTTACCTGATG GGTTGCCCAATTCGGGGTGTGATTTTAGATCCGATCATTGCAATGCAAATGGGCATTCAAGGACAGGCAGGGACTCAGTT TTGGGATGAGAAAGTTGCCAATGACCTTTCTGAAGGGCGACTTGATGGTACAGCTTTTGATAGGTACTGCATGGTACTTT TTGCTGGCATTGCAGCTGAAGCGCTTGTTTATGGTGAGGCAGAGGGGGGAGAAAATGATGAAAATCTATTTAGAAGCGTC TGTCTACTTCTTGAGCCTCCATTGTCTGTAGCTGAGATGTCTAATCAAGCAAGATGGTCAGTTTTACAATCTTATAATTT GCTCAAGTGGCATAGAGATGCACACCGAGCTGCTGTTAAAGCCTTGGAAAGTGGTGGCAGCCTGAGTGTTGTTATTAGGA GGATCGAGGAGACTTTGTATTCCAAAAAATGA
Protein sequence (LotjaGi6g1v0204900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVHIFPHFLALSPPFSLGFPRAATRRALRPRRALREWRDYEEAVKRKDLAGALRFLKSLETEQRPFADVEGPSPVTEST QSRFRDLELFGPQRDWEVLDTCLNADDMKLVGNAYKFLRDRGFLPNFGKCRNIVLEGTRKVTPDVLRSSTGLEVTKLSPK KWGLSDSSSAILVAFLGGVSFLISQGIDLRPNLAMILGLAIADSIFLGGTCLAQISSYWPPHRRRILIHEAGHLLTAYLM GCPIRGVILDPIIAMQMGIQGQAGTQFWDEKVANDLSEGRLDGTAFDRYCMVLFAGIAAEALVYGEAEGGENDENLFRSV CLLLEPPLSVAEMSNQARWSVLQSYNLLKWHRDAHRAAVKALESGGSLSVVIRRIEETLYSKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 169 | 169 | - | – | |
| PANTHER | 31 | 382 | 352 | 3.9E-200 | – | |
| PANTHER | 31 | 382 | 352 | 3.9E-200 | – | |
| Phobius | 170 | 187 | 18 | - | – | |
| Phobius | 188 | 192 | 5 | - | – | |
| Phobius | 193 | 215 | 23 | - | – | |
| Gene3D | 212 | 316 | 105 | 2.9E-6 | ||
| Phobius | 216 | 383 | 168 | - | – | |
| SUPERFAMILY | 219 | 368 | 150 | 8.37E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi6g1v0204900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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