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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0208500 |
| Transcript ID | LotjaGi6g1v0208500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Root meristem growth factor 9-like protein; TAIR: AT5G64770.1 root meristem growth factor; Swiss-Prot: sp|Q9Z2G6|SE1L1_MOUSE Protein sel-1 homolog 1; TrEMBL-Plants: tr|A0A0L9TR46|A0A0L9TR46_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0208500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50614049..50615890) extracted from Lotus japonicus Gifu genome v1.2.
ATATATTAAATTCGATATTACTTCTCATTTCTCGTTCTTTCTCACTCTCGGTGGGTGTCTGCAATATTTAGATGTTTCAT TGTCAATTTTCCTAAGTTCATGTTATCCAACATATGGACCCCTACACATTGATAAATATATAAATATAAGTAGCCATCCA TCCATCCCCCAGTCACACACAAGTTACAAGCTCTCATTTCATGCTTGGTTAAGCAGAGGAAGCTTTGTCTGAAGAAAATT CCACCCATTTTGTTAAGTGAATCAATCTACTTGTTACTATTCTTCCCAAGAGTTTTCTTCAAATGAGGCCATCTTTTGTA GTCTCTCTTATGCTTTTGTCTTTCTTTCTAACCAAGGCTCAAGGTAAGTACTAAACATTTCAACAGAACTTCATTTAGGC CTTCTGTTATTTATATACTATATAGCAATTAGCATCTTGATTTCTCATGTTACTTGTTTCTGATCAGGGATTCGCTTGGA GAAAGGGTCTTTTGCAGCACAGCAACATAACAAACATGTTGGTGATCCTTACTTTGAAATTTTATGTTTTCAAGTGTTAA CCTTCATTTTTATTTTCATTCTATGCTAATAGGAAAAATCACCTTTTTCTGGTTGCAGGATGAAGAAGATAACTTGTTGA GAAGAGAAGATAGCAGTGATGATGAAGCTGTTCTCTGCAAAGATGAAAAATGCACAGGTACCTTGAAGAAAAGAGCTTCC AGAAAAACAAACCACTGGTTACCCCGCATTCATGAAGATTACTATGGACCTAAACACCACAGAGCTAGACACCATTAATA GCTTTCTAGACCAGAAATTCATCTTTCTTTGTTCCTTCTGCACAACCATTCTTCCAAACCTTACAAACAAGACCATGTAA TTCTTGCTGCAAATTTCCCCCCACAAAATTCCTGACTGCATCTAATTTTATGATTTTATAGATAGAAGAAAGTCATTATC TTTTTTCTATGTTCTTGTCCCTGGACTAAAACTTCACAATGTAACAAATGTTGAGCATCATGCAAGAAATTTTAGTGCTA ACCTCCACTATCCCACAATATTAAGTATTCTTTTTCTTATGTTGCTGCAGGAAAGATAAAGAATAGGAAACTTTTTACCA CATCAGTTTCTACTATCCATGCCATTTCAAAGGTTGGTTTCAGTAATATACTTGAACATGAATGATGTAGATATCTAACA AACACCTCAAATTTCTCTTTATCTCTCTCTTCTAACATATATCATATCAATTAGTTCTCTCACCTCTTTTCTTTTCTCAC TCTTGGTGTATGTTGAATGTCTGCATTATGCGGATGTCTACAAAACATTTTCGGATTGGTTTAGTGATAAAAGAAAAAAA AATTTGATTATTTAGATGCCAACTCTAATGAAACCTTGGAATCACTTCCTTTTATGTCCATGGACAGAATGTGAAGAATG GAGGGACTGATAAAGAAGAGGAAATAAAAGTAAATAAGCAACAAGAGGTTCCTCATGAGCACAATCCAGACCTTGTAGAC ATTGTTGACATGGACTATTCTCCAGCTAGGAGAAAGACTCCTATACACAACTGACTCTTGGGATGATCAACTAGAAAAAC AGACCGCTTCAGTTTAGCATAAATAAAATATTGGCAGAGAAGTTGGACAGCATTGCAGAAATGCTGCAATTTTTTAGGCT TAAGAATGATTTGTATATTATATATTCTATCATCTATTATGATATATTTTTTATGATATCTGCTTTTATGATTGTATCAT GAGTACTATATAGAACAATATATAATTCTCGAGGCATAATTAATCAAAAAAATTAGATATGTTACATTAATGGAAAGCTA AA
CDS sequence (LotjaGi6g1v0208500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGCCATCTTTTGTAGTCTCTCTTATGCTTTTGTCTTTCTTTCTAACCAAGGCTCAAGGGATTCGCTTGGAGAAAGG GTCTTTTGCAGCACAGCAACATAACAAACATGATGAAGAAGATAACTTGTTGAGAAGAGAAGATAGCAGTGATGATGAAG CTGTTCTCTGCAAAGATGAAAAATGCACAGGAAAGATAAAGAATAGGAAACTTTTTACCACATCAGTTTCTACTATCCAT GCCATTTCAAAGAATGTGAAGAATGGAGGGACTGATAAAGAAGAGGAAATAAAAGTAAATAAGCAACAAGAGGTTCCTCA TGAGCACAATCCAGACCTTGTAGACATTGTTGACATGGACTATTCTCCAGCTAGGAGAAAGACTCCTATACACAACTGA
Protein sequence (LotjaGi6g1v0208500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRPSFVVSLMLLSFFLTKAQGIRLEKGSFAAQQHNKHDEEDNLLRREDSSDDEAVLCKDEKCTGKIKNRKLFTTSVSTIH AISKNVKNGGTDKEEEIKVNKQQEVPHEHNPDLVDIVDMDYSPARRKTPIHN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| PANTHER | 1 | 132 | 132 | 4.9E-35 | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 132 | 132 | 4.9E-35 | ||
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 132 | 111 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Growth factor activity | The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation. |
Expression pattern of LotjaGi6g1v0208500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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