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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0208700 |
| Transcript ID | LotjaGi6g1v0208700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase-related family protein; TAIR: AT2G41040.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q0WPT7|Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplastic; TrEMBL-Plants: tr|A0A151QX03|A0A151QX03_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0208700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50640605..50644401) extracted from Lotus japonicus Gifu genome v1.2.
GCCAATTCCTGCACACTCAACAGAGAAGAGAAGCAAGAAGCAAGCAAGTTTGGTGTTGAGTTCATGATTTACGTGGTTGA TTTGAAACCGAAAACCAAACACGTATTTTGTGTGGGCCTCAAATAACACAACTCTTCACTTTTTCCACTTTAATTATATA AATGTCTTTTTATTTCTCACTCAAAAATCAACACACAATTCTAACACCAGTTTTCTATTACCAATGGCCATGTCTGTTGC TTCTTCTTCTTCTCAATTTCTCCGACCTCTTCATCAGCTAGAGTTCCCGAAATGCCCTCGCCTTTCTTCTAAATCCCAGT TCCGCCCTCGCCCCCTCCGCCGCTTCCAAACCCTCCGGAACAACATTCGCGCCACCGCCGCCGCCGCTCGTGTTGCTGAT TCGGTATACTCTGCAACCTTCTTCCCCTATTCATTCCAATCATACTTAGTTACAATCAATTCATTCACTTTCTTACAGTT AGTTCAACCATTCTGTTTTCAGCTAGCAATAGCAATTATATATATATATATATATATATAATTTCACTGATTGTTGATCT CAATTGTGTATAGAATAGTACAAGATGTTTTTCTTAGTGCATTGTCTATAAGTACATACATTGATATTTTGTTTGAATGC ATATCAGATTTTGGTAGTGCAAGTGTTAGAAATATAATGTAAAATCAATCGTGTGTCATTTACTTAACCGCTTAAGCTTT TGGGATAATTGGTTCGTGACAGCATAAAATTTAACAAAGTTGTATATGCTTTCTTAGGAGTAATTTACGTTAGCGCCTTA GCGGCAGAAGTGAAAAATCCAACTTATGTAAGGTTGATTGTTAAATTCTGCTTCAGGAATTCAGTTCAAAGCATGATCAG GCTGTAGCGGCGGACGTCTTGGCGTGCCCAATATGTTATGAGCCATTGATAAGAAAAGGTCCTGCTGGCCTTAGCTTGTA AGTTGTGTAGATATGTATGAGATTTTAGTTCTGTTTGTATCTCAAAGAGTGTCTCTGACTAAATGGTTTTGAAACTTCAG ATCAGCAGTCTACAGGTCTGGTTTCAAGTGTGAGAAGTGTAAAAAATCATATTCTAGCAGAGATAGGTATCTGGATTTGA CTGTAACTGCTGGCTTGAGAGATTACACTGAAATTCCACCAATTCAGACTCAGCTTTTCAGGTATATGGATATATTTGTA ATTTAACTCCAATTTCATGGCATTTGATTGTTATGTGATGTATAATCCCATGATATTCATGTTAGTTGTATGCACTTGAT GAAAATTTATCACATGAGGCACATACCAGTTTTTTGACAATGTCATTTTACAAATCCATTTTTTCATGTCGTTCTTTATT TGAGGAGACACAAGTTGTAATCTAATTCTGTTTTCTGCATGGAACAATCATTTGGGGATGTTCTTATCTTTCCTTTGTGT CTAAACTTTTATTAGGAGTCCCCTTGTTTCATTCTTATATGAGCGAGGTTGGCGTCAGAATTTCAGTCGAAGTGGCTTTC CTGGTCCGGATGAAGAGGTATGCTTTCTCGGTCAGTACTGTGACTGCAATATGCGAATATTGAAAAATCTTCATGATAAT CGTCTAAACCACTTTGTTTAATAACATATGTACACATATCACAGAAAGGAAGCTGAGGCCCTGTATCATTTTGTAATTTT TTTGGCTTGATTTATAATAATGCAATGCATATTAAGCTCATTATTTTTTCTATCATGCAGTTCAAAATGGCTCAAGAATA CTTTGAACCTGCTAAAGGTGGTCTTATTGTGGATGTTAGCTGTGGTAGCGGTTTATTTTCCCGAAAATTCGCCAAATCAA AAAACTACTCTGGAGTCATTGCACTAGATTTTTCTGAAAATATGCTTCGCCAGAGTTATGATTTCATTAAGAAAGATGAC ACACTTTCAACCACGTATTATTTTCCTCCTCCTCTGCTTGATTCTAAATTTAATGCAGCCAAAGAATAATAAATTCGATG TCTTTCCTTTCGTACGAGGAGACATGAAAGCGCTGAATACTGTTTATTTCATTATTTGCAGTAATCTTGCACTTGTAAGG GCGGATGTTTCTAGGCTTCCCTTTTCATCAGGTTCAGTTGATGCAGTCCATGCTGGTGCAGCTTTACATTGCTGGCCATC TCCCTCCAATGCTGTAAGTTCTGTGGCTTTGTGTGAATTAAAAGTCAAATGTTTGGGTTGGGGCAAGCTTTTTAACAGAC TGATATCATTGTGTATGACCATGTCTATTAAAATATTGAGCCACTCTTTACACAAAGGGCTTTTTGTGTTCTTAGATTCT AGAATCTTGTTCTCTGTTAACTTAAGTACCCATGATTCTACATCTTATTGTGTAAAAAAATTTGCAGACTTACTATGCCA GATTCAAACTAATAAATTTTACTACTTTCACAATAACAAATCAGTTTTTAATTGGTCGTTGTGAAGTATTAAGTGTTTGC TAAACAGAATGTTTACTGCATCATAAAAGCAAGGTTTCTACTTCCAGAGATACATAAGATTAGAAAGAGGAAACTGGCAG AAATTTCCTTTTTATGATATTGTCCTGAATGAGTGTCTAAACATAATATAAGGAATTCTAACAACCTGCTGTTTGACAAA ATCTTTTTAATTCTTTTAGTGGGTTGTGTTTCATCTTTCATGTAGGATTCACTAATTGAAGAATGGGCCTAGGTTATTTA GGGTGAGAACCACATGAACTTCACCAAATAGCAGTGAGAGTATCAAATAGTGTGTTGCTAACTTTTCCCATGAACCTATG ATGTGCAAGCATATAAATACATGATACGTGCGTACATACTTTATGCTTCTTTCATGTCTCTACACTCTACATCTACACTA TACACATATGAACAAGTTATGTATGTACTTTTCTTATAAAGTTTGCTTGTAGCCTACGAGTCTTCCACATACATTTTCAC TCTATTTAAGTGTGTGTAACTTTCATGATGACAATCCAAATATGAATTTCTTAAAGGTTGCTGAAATCACCCGGGTACTA AGAAGCGGTGGAGTATTTGTTGGAACCACTTTTCTGCGTTACAATTCGTCAACTCCCTGGCTTGTACGCCTCTTCAGAGA GGTAAACTCGGACAGTAATTATCTTTGATCATTGTCATAATAACCTGATGTGTCAAAATTTTGCATGTTGAACTTGACCT TGCCTTTTGGCTTTTGGTGTGAGTTGCCAATTGGAGTGATTACCTGATTATCTCCTAAATCCACAAATAAGATATCCCAT TTTCTTTTGCAGAGGACTTTTCCAGGCTATGGCTATTTATCAGCGGAAGAAATTGAAGACCTTTGCACCTCATGTGGTCT AACCAACTACTCATGCAAAATTCAGCAGTCTTTCATTATGTTCACAGCTCAGAAGCCTTAAAACTATATTTGATCCATGT ATAACACTGATTCTCCTATATTTTATTAGTTTCTTATGTTATTTGTTTCATCTGTAAAGAAACTGTAAATATACAGGAAA TGAAAAGATGAAAACTGGAGATGTATGTAATGAGAAAGTCTTTCATATATATTAACTATTGAATCCACTTTATGCCGTTA TTTCATTGCTCTGTTTTCATTCTTCTAAAATAAGAGATTTACACAACCATTCTACAGTTATCTTATTTGCATATACCTTC ATTCTGTTTTTGTTTTCTGAGTCTTGTTGTTAAGGTTTTTTTTTTACTGGTGACATATAACTTATGTTTTCTGAGTCTTG TTGTTAAGGTATTTTTTTTGTCAATATCTTACTTTTT
CDS sequence (LotjaGi6g1v0208700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGTCTGTTGCTTCTTCTTCTTCTCAATTTCTCCGACCTCTTCATCAGCTAGAGTTCCCGAAATGCCCTCGCCT TTCTTCTAAATCCCAGTTCCGCCCTCGCCCCCTCCGCCGCTTCCAAACCCTCCGGAACAACATTCGCGCCACCGCCGCCG CCGCTCGTGTTGCTGATTCGGAATTCAGTTCAAAGCATGATCAGGCTGTAGCGGCGGACGTCTTGGCGTGCCCAATATGT TATGAGCCATTGATAAGAAAAGGTCCTGCTGGCCTTAGCTTATCAGCAGTCTACAGGTCTGGTTTCAAGTGTGAGAAGTG TAAAAAATCATATTCTAGCAGAGATAGGTATCTGGATTTGACTGTAACTGCTGGCTTGAGAGATTACACTGAAATTCCAC CAATTCAGACTCAGCTTTTCAGGAGTCCCCTTGTTTCATTCTTATATGAGCGAGGTTGGCGTCAGAATTTCAGTCGAAGT GGCTTTCCTGGTCCGGATGAAGAGTTCAAAATGGCTCAAGAATACTTTGAACCTGCTAAAGGTGGTCTTATTGTGGATGT TAGCTGTGGTAGCGGTTTATTTTCCCGAAAATTCGCCAAATCAAAAAACTACTCTGGAGTCATTGCACTAGATTTTTCTG AAAATATGCTTCGCCAGAGTTATGATTTCATTAAGAAAGATGACACACTTTCAACCACTAATCTTGCACTTGTAAGGGCG GATGTTTCTAGGCTTCCCTTTTCATCAGGTTCAGTTGATGCAGTCCATGCTGGTGCAGCTTTACATTGCTGGCCATCTCC CTCCAATGCTGTTGCTGAAATCACCCGGGTACTAAGAAGCGGTGGAGTATTTGTTGGAACCACTTTTCTGCGTTACAATT CGTCAACTCCCTGGCTTGTACGCCTCTTCAGAGAGAGGACTTTTCCAGGCTATGGCTATTTATCAGCGGAAGAAATTGAA GACCTTTGCACCTCATGTGGTCTAACCAACTACTCATGCAAAATTCAGCAGTCTTTCATTATGTTCACAGCTCAGAAGCC TTAA
Protein sequence (LotjaGi6g1v0208700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMSVASSSSQFLRPLHQLEFPKCPRLSSKSQFRPRPLRRFQTLRNNIRATAAAARVADSEFSSKHDQAVAADVLACPIC YEPLIRKGPAGLSLSAVYRSGFKCEKCKKSYSSRDRYLDLTVTAGLRDYTEIPPIQTQLFRSPLVSFLYERGWRQNFSRS GFPGPDEEFKMAQEYFEPAKGGLIVDVSCGSGLFSRKFAKSKNYSGVIALDFSENMLRQSYDFIKKDDTLSTTNLALVRA DVSRLPFSSGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYNSSTPWLVRLFRERTFPGYGYLSAEEIE DLCTSCGLTNYSCKIQQSFIMFTAQKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 5 | 13 | 9 | - | – | |
| PANTHER | 10 | 346 | 337 | 5.5E-154 | – | |
| PANTHER | 10 | 346 | 337 | 5.5E-154 | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 347 | 329 | - | – | |
| Gene3D | 140 | 346 | 207 | 4.3E-32 | – | |
| SUPERFAMILY | 148 | 346 | 199 | 2.79E-32 | ||
| CDD | 184 | 290 | 107 | 1.75392E-11 | – | |
| Pfam | 185 | 285 | 101 | 1.3E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0208700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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