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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0210500 |
| Transcript ID | LotjaGi6g1v0210500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DnaJ domain-containing protein; TAIR: AT1G30280.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2; TrEMBL-Plants: tr|I1MHW5|I1MHW5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0210500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50798863..50803569) extracted from Lotus japonicus Gifu genome v1.2.
TTATATATTTACTGAAAAAATATTTAAACAAGTGAAGCATAAAGAAAGAGTAAAAGTCAATCAATGACTTTTTTTTCACA AATCACTTTTCCTGTTTTTTAATTACTTTTATTCTTTTGTTTCATCTTCTTCAACTCTATATATAACCACAAGCTACACT TCCTTTCTTTCCAGTGAATTTTCCGATCAGTGAAGAGGAGAAGCTCACCGGTGAACCTCGCCGGAAAATGGACGAGTCAT GGAGGATGCGGATAGGATTAACGCCAGCTATCCCTAGCCGGCGATCCATGGAAGACCATTCAAATTCCCGGACAAGGAGG TCCATCTTCTCCATCGCCGGCGCCTCCGAGCCGGAAACCTTGGACGCCGACGACTTCTCTGACGTCTTCGGGGGGCCGCC GCAAAGCCTCCTCGTGCACAAGTTCTCCAGGTCAAATTCATTCTACGAGGAAATGCTACGGCCGTCGGATTTCACTTCTT CGCCGCCGCCGCCGCCGCCGCCGAAGAGCTGCCGGAGTGTGCCGGTGTTCAGGATTCCGGCGAAGAATGAGTCGTTTTAC AGCGATATATTCGGGTCGGACGATGAACGGAGATCGATGGAGCTGTCCGGGTCGCAATCGATAGCGAAATCGAAGTCGAA TTCGTCGTCGGCGGTGAGTTCAGAGGAGCTGAGCCCTCTCCGGCCGGCGATCCGTGATGACGTGGCATTATCCGCCTTTT CTTCAAATCTCAGGTACGGAAGCTGAAATGAAATCCCAACGAAATAACTGTTTATCCAGCTATGATGACATTTATACCCT CCATGTAGTTATATTTTTAGATGTGTTCTTAAGGGTGCACATGGGTTGGGTAGATCTAATGAACCCGCCCGATCTAACCT AATTCAATGGAAAAAATGCGGGTTGGATTGGGTAAACAGATCAATCGGACGGATTTTATTACAATCCAATCAACTTCGGA TCAGATATCAAATTTAATAATAATTCACCCAACTCAACCCGAAATCCAAACATACAATAATAATATATTACTTGATATAT ATTTTTAATAATTTTACCTATCCAACCTCAAAATTTTAATACCCTAATTTTATTTCACGGTTTCACTTTACACAGTCTTC ACTCTTTGTTTCAATTTTATTTGGCATATAAGGGAATGAAAGACATCTAAATTCTAAGTATCTATGTCATTGTCGTATTG ATTAATTTGATTTCATTGTCGTGGTTGTTTTTCATGGTATTTGACTATATGTCATTTATGCAATACTATTTCATGCTATT TAGTACAATGTTTTGTGTCCTTTTTATGCTATATGGTACTATAACAAATTTACTAGTTTTTTCTATTTTTTTCAATATTC TAATTTTATTATTATTTTAATATGTCGATCCAATTAACCCATCCGAACCAACCCAAAGATCGTCGGATTGGGTTGGATCG GGTCCGAAGGTAAAAATTCATGAAATCCAACCCAACTCAACCCAACCCAAACAATTTTGATCGGTTCGGATCTTAATTAG CCTAAAAATCTATCCAACCCAACCCATGTGCACCCCCTTGCTTAGGCTAGGGTTATTATAGGAAGACAATAACTGTTTTT AAATCTTAGGGCATGTTTGATTTATATAACACATCTCAAGTTGTATTCTTCACTTGAAATTAAAGTTTCAAAAATTGTTT TAAAAAAATAACTTTTAAATATAAAAAGCTAAAAATAAAATCAATCAAACTCTTACAGATGTCTAGCTTGAATTTCTTCG GCGATATATGGAATTAGGTTATGTTTGGATATTATTTCACATCACTATAAATGGATGTTAATGGATGTTAGTATGTCCTT CAAAATAAAAAGTGAATGAAAATTTTCTTACCTGTATCTAAGCACACAATTGCTTGCTAAAGTTGGGAGATTATAGGCAA TAAATGGTATTGCTTTTCTCAGAATATTAATATAATAATGCTATGTGTTAGAAGACTAATTATATTGCAAACAATTTTTT TTTCCTTTGGTCACCGGTCTCCATGGGGGAAAGAGGTTCCACGTGACTAATCTGGCTCGGGATACGGTAGTGATGTCCCT GACCACAAAGATATTATTTTTTACCTCAGAGGGGATCGAACCTAGGCCAGAAGCCTAGGTGAAATCCCTTAAGGAAATGC ACATTCACCACTTATGCCTTATTGCAAACAATTTGGCATTAACTTGTCCATTCCTATCAAAGACCAAAAATATTAATTTG GAAACAAACTACTCCCTCCGTTCCTTTTTAAGTGTCGTTTTAGAAGAATTTTTTTGTTCCTATTTAACTGTCATTTTGAT GTTTTAAGGTTCTATTTGTCAATTATACCCTTACTTTTTCAATAGCTCTACATCACATTTTTCTTAAAATTCTCCTTTCT CAATAACTATGAAGAGCTTTATGACTTCATGATTGGGTGAGAGTTGTAGATGGTTTAATGATATGAGAGAGTGGAAAAAA AACTAACAATCCATTATCTTGGTTGGAAAGCTTTATGACTTTATGATTAAAGTTTGAGGGGTAGAATGAGAAAAAACACT TTAACAATCCACTATCTTGGTTGGGAGTATATTGTATGACAAGCATATTTTACTTGTCTATAACCTTGAGGCATCCTAGT GGTAGCTTTTCACCTTCCCCTTTGACCAGGAAGTAGCAATTAACAATTCACTTGTCGATGCAAGTTACATTGGACCTTGG AGGTTTTAACTTTTATGTTGCTTTGCTTTCTTTTTTCTAGCTACTACAATGTGCATGGTGTTTGTTTTTCCTGAGCTTTG TTGAAGATTTGATAACTTAGGAAACTAGAATAAATTGGTAACCTAGTTGTGGGAATTCTCAATGATTGTTACAGGCCAAT TAATACCCCATGTAGATGGAACTCATCCACTATGATGCCTGAGGAACACCCAATTAAACCAGAGAGGCCACTTTTTTCAT GCAATGGTCAGCCATTTGACATGCAGAGTCAGGATAATGAGTATAAGGAGAACTTCAAAAGTCCTCATGTAGGATTCACA AGAAGAGTCTCATCCCCAGAAACAATCAGTCTTGAATCCAATTCATATAAAAGCATCAAAGTATCCGGTGATGACTGGGA AGTCAACTCCCCATTTTCTGCTGTCTCTGGACTTTGTCAAGAACCTGAATCAAAGTCTTCAGTTCATGATCATGTGCTTC CAGAACTAGTTATAGAGCAGGATGATGATTATGATAGTGATGATGATGAAGTTATGAGCTCCTATGTCATAGAGGTCAAC TCCAACCTCAGAGAGGAGTATTGTGAAACAACAGGCATTGATGAAGCAATTGCGTGGGCCAAAGAAAAGTTTCAATCACA TAAATCTAATGAAGAATCAAGCTTGCGAAACGACGGCAATGAGAAAACTCCTGGGATGGAAGGTGATCTATCTTAACCAG ATAATTTGAAGAAAAACTCATACTAATTTAGTGCACAGTAGGTATAGTAAGTAACAGACAAAGGCAGACACCTCATTTTG ATTTCTTATCATATAATGCAGGAAGGCCTGGTCCAGGTGATTACCATAATGGTGGGATCGGAATAGTTAAATCTCCCCAG GTAATATATTGTACAAGGTTAGGGTTAGCATATCTGCTTAAGTAACAAAGGATGCATTTGGATTGCTTTTAGTTTTCTTT TGCGCGTCCAAAGGGATTGGAATTTGGAATGCTGTTCCAAACAAACCTTCTATTATTAGGATTCCTTTTTGTTTCCATTT CTTATACTACCTGAGAACAAAGATTTATACTGATTGTTCTGCTGTTTCTGCAGAAGGTACAGACAGAAACAGAGAAGTTG GACAGAGATGTAAGATATTGGTCATCTGGCAAGGAAACTGACATCAGGACACTGCTTTCAACACTACATAGTGTAAAGTT TTCTTTATTGTTGACCTATTATCATTGAGAATTTGTTGAATATTTTGAAATTTCATACCCTTTTGATGTATTCACTATTC GGATAATTGACATGATTGCATGTTTTCAATACAGATTCTGTGGCCTGAGAGTGGCTGGTATGCTGTTTCTTATATGAGCC TAATAGAAAGCTCACAAGTGAAGAAGGCCTATCAGAGAGCAAGATTATGCCTCCACCCAGACAAATTGCAGCAAAGAGGA GCAACACAGCTGCAGAAGTACATAGCAGAAAAGGCTTTCTCCATTCTTCAGGTTTGTGAAATATATACATATATTGAATT ATTGATCAGTTACACTTTTGAGTTTCTAAAATGTAATAAATGATACTAAGGATGAATGCAGAAATTAAGTTCACATCTTC TACGTTTGTACAGGATGCATGGACTGCATTTATTTCTGAAGAGGTTTCCTTCTAACCTGCGGATGACTCCAATTCCTGAT CACTCAGTTTTGGTTTAAAGCTTGTGGACAAACACCAAGTTAGACATTTGAAATGATGGAAGTGTTTGTTTCCGCTTAGC AAAAATACACATAAAGTAAATGAGTTTTGAAAACAGCAACTTCTTTGTATAAATAGTTGTCTGATAGAAGTAGAACCACT GTTTTGTTTTGTTTGTATCAGAACTTGTTTGATGCTTTTGTAAGTATTATTTTGGAAGTAGTTAATAGAAAGTTATTTAA TTGGTTTCAACATTTTACTTGTATATGATGACATTTTTGCTATTTGTTGCTACATGGAGACTCCTAC
CDS sequence (LotjaGi6g1v0210500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGTCATGGAGGATGCGGATAGGATTAACGCCAGCTATCCCTAGCCGGCGATCCATGGAAGACCATTCAAATTC CCGGACAAGGAGGTCCATCTTCTCCATCGCCGGCGCCTCCGAGCCGGAAACCTTGGACGCCGACGACTTCTCTGACGTCT TCGGGGGGCCGCCGCAAAGCCTCCTCGTGCACAAGTTCTCCAGGTCAAATTCATTCTACGAGGAAATGCTACGGCCGTCG GATTTCACTTCTTCGCCGCCGCCGCCGCCGCCGCCGAAGAGCTGCCGGAGTGTGCCGGTGTTCAGGATTCCGGCGAAGAA TGAGTCGTTTTACAGCGATATATTCGGGTCGGACGATGAACGGAGATCGATGGAGCTGTCCGGGTCGCAATCGATAGCGA AATCGAAGTCGAATTCGTCGTCGGCGGTGAGTTCAGAGGAGCTGAGCCCTCTCCGGCCGGCGATCCGTGATGACGTGGCA TTATCCGCCTTTTCTTCAAATCTCAGGCCAATTAATACCCCATGTAGATGGAACTCATCCACTATGATGCCTGAGGAACA CCCAATTAAACCAGAGAGGCCACTTTTTTCATGCAATGGTCAGCCATTTGACATGCAGAGTCAGGATAATGAGTATAAGG AGAACTTCAAAAGTCCTCATGTAGGATTCACAAGAAGAGTCTCATCCCCAGAAACAATCAGTCTTGAATCCAATTCATAT AAAAGCATCAAAGTATCCGGTGATGACTGGGAAGTCAACTCCCCATTTTCTGCTGTCTCTGGACTTTGTCAAGAACCTGA ATCAAAGTCTTCAGTTCATGATCATGTGCTTCCAGAACTAGTTATAGAGCAGGATGATGATTATGATAGTGATGATGATG AAGTTATGAGCTCCTATGTCATAGAGGTCAACTCCAACCTCAGAGAGGAGTATTGTGAAACAACAGGCATTGATGAAGCA ATTGCGTGGGCCAAAGAAAAGTTTCAATCACATAAATCTAATGAAGAATCAAGCTTGCGAAACGACGGCAATGAGAAAAC TCCTGGGATGGAAGGAAGGCCTGGTCCAGGTGATTACCATAATGGTGGGATCGGAATAGTTAAATCTCCCCAGAAGGTAC AGACAGAAACAGAGAAGTTGGACAGAGATGTAAGATATTGGTCATCTGGCAAGGAAACTGACATCAGGACACTGCTTTCA ACACTACATAGTATTCTGTGGCCTGAGAGTGGCTGGTATGCTGTTTCTTATATGAGCCTAATAGAAAGCTCACAAGTGAA GAAGGCCTATCAGAGAGCAAGATTATGCCTCCACCCAGACAAATTGCAGCAAAGAGGAGCAACACAGCTGCAGAAGTACA TAGCAGAAAAGGCTTTCTCCATTCTTCAGGATGCATGGACTGCATTTATTTCTGAAGAGGTTTCCTTCTAA
Protein sequence (LotjaGi6g1v0210500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDESWRMRIGLTPAIPSRRSMEDHSNSRTRRSIFSIAGASEPETLDADDFSDVFGGPPQSLLVHKFSRSNSFYEEMLRPS DFTSSPPPPPPPKSCRSVPVFRIPAKNESFYSDIFGSDDERRSMELSGSQSIAKSKSNSSSAVSSEELSPLRPAIRDDVA LSAFSSNLRPINTPCRWNSSTMMPEEHPIKPERPLFSCNGQPFDMQSQDNEYKENFKSPHVGFTRRVSSPETISLESNSY KSIKVSGDDWEVNSPFSAVSGLCQEPESKSSVHDHVLPELVIEQDDDYDSDDDEVMSSYVIEVNSNLREEYCETTGIDEA IAWAKEKFQSHKSNEESSLRNDGNEKTPGMEGRPGPGDYHNGGIGIVKSPQKVQTETEKLDRDVRYWSSGKETDIRTLLS TLHSILWPESGWYAVSYMSLIESSQVKKAYQRARLCLHPDKLQQRGATQLQKYIAEKAFSILQDAWTAFISEEVSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 13 | 475 | 463 | 8.6E-203 | – | |
| PANTHER | 13 | 475 | 463 | 8.6E-203 | – | |
| MobiDBLite | 78 | 98 | 21 | - | – | |
| MobiDBLite | 82 | 97 | 16 | - | – | |
| MobiDBLite | 121 | 150 | 30 | - | – | |
| MobiDBLite | 126 | 147 | 22 | - | – | |
| MobiDBLite | 332 | 366 | 35 | - | – | |
| Gene3D | 371 | 474 | 104 | 3.8E-35 | ||
| SUPERFAMILY | 371 | 473 | 103 | 3.01E-23 | ||
| CDD | 424 | 466 | 43 | 2.50692E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0210500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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