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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0211900 |
| Transcript ID | LotjaGi6g1v0211900.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Endoplasmic reticulum oxidoreductin-1; TAIR: AT2G38960.1 endoplasmic reticulum oxidoreductins 2; Swiss-Prot: sp|Q7X9I4|ERO2_ARATH Endoplasmic reticulum oxidoreductin-2; TrEMBL-Plants: tr|A0A151S2W1|A0A151S2W1_CAJCA Endoplasmic oxidoreductin-2; Found in the gene: LotjaGi6g1v0211900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50922687..50928473) extracted from Lotus japonicus Gifu genome v1.2.
TATCGACATAAAATATAATGTTGCCGACGTGCTTCCAATTGGGCTATTCTTATTACATCATCCAAAATTGACTTATTTTT CTGACCCATAGTTTGGCAGAAAAACCATCAACAATGCCCATAATTTTCACATCAAAACATCTTCCTTTTGACTTGCCACA AAAGAAAGAAAGACAATAAACAGAAAAACCTTCCTTAACTCCTTTCCCCTCCTCACACCTTCATAACCAAAACGCGTTCA TTCATTGCCACCCCCATTTCCTCTGATCCATCAACAAACACCAAAGATCTCATCTTTTTCGCATTTCTGCAACTGGGTAT TTTTTGTTTTTCTCGGCGGCGATCTTCACGAAGGGTGATGGTGAAAACCGACGGTGACAAGAAGAGGGGTTTCGGAACCA GATGGCTTTGGCTGGTGGTTGCTCTTGTCGCCGCCTTTGTTGCCATGGCTGTGTCTTCCAAAACTTCTTCCAAGATAGCT CTCTTTGGAGCAATTGATAGAGCATGTCACTGTGCTCGGGTAATCCCTCTTCACTCTCCTGATCCATACTGAGTTATTCT GTTTTTGTTACCTACTCACATTTGGAGCTTCCCCTTTTTTCTTAAATTGAACTGTGAATCCTAATCCTAATCCTAATCCA TTTTGCATTTTTTTATTTTTCAACTAACTACATAGCATGTCTCTATGAAGCCCCAAGTAGTAGAAAAATGTAGAGATATG TACTTGATTTGATGGGAAAATGTAGAGATATGTTGTGAATCCTAGCTATTTACTAGAATATATATATATATATATATATA TATATATTTTTTTGTTCTTAGTTGAGGGTGAAGGCTTTATTTTTCCTTATTGTTTGTTGCAGGGTACACCAAAGTACAGT GGCATGGTGGAGGATTGTTGTTGTGATTATGAAACTGTGGACCGTCTCAATGAGGAAGTGTTGAACCCATCCCTCCAAGA ACTTGTGAAAACACCATTCTTTAGATATTTTAAGGTTTGCTTGTTGTCACTTCTTATGTCTACATTTGGCTTGAATTTTC TGTTGCTAACATTTGTACATAGTTGATGCTCACTTTTACTTTTTATATTGTATAAGAGGCAGATAAACCATTAGGTTTTG AGGAGGGCCTTCTTGTTTTGATCTGTATTTTGTTGTCTCCAATTGACTAGCATTTGTTCGTCCTATCCCTTAAATGACTA GCAAAGATTTCTTGCATCCAATTCATAGTCAGCGAACACAATTTAGCATTGAAGGGCCTTTCTAGAGAAAGAATTTGCAA TAGGGTCCTAAGTTCGCAGCTTGTTTATTGATCATTTTTAAAGGTTTTATCCATCACTGGACTATTCAAATTTTAATTTA ACCAACAATACGAGACATAAGAGATACCCACAGTAGCACACATGCTGTAGAAACACATGAAAGCTTTAGAATTGAGCACG CATAGCCATCTGCATTGTCAACTAAGCTTAGTGGCCTTCAGCTCAAACTATTCTATTCAAAATCATGTATTTTAATATAT TGTACGTGATAACCCTATTAAATTGGAAATCTACTATTTATGTTACTATGTGGTGTGTGTTTAGGATGCATATTATTGAT AGTGATCTACAAAGTTTGAAGTTAAGAGTGGATAGTGTTGAAAAGTATGTTTACCAATGATATTATGCAACTAGCATATT TAAACAACACTTTAGATTGTGCATTTTATGTATGGATACCTACCGCTGAATTGAATATTATTTTCTGCTTTTGTAAACCC TCACATGTTTCCTCTCTGCTAAAGACTATTAGATGAAATTTGCTACAGGTTAAATTATGGTGTGACTGCCCTTTTTGGCC TGATGATGGTATGTGTCGGCTGCGGGATTGTAGTGTATGTGAGTGCCCGGACAGTGAGTTCCCCGAATCATTTAAGAAGC CCAAGCGCCTTTCGTTGAATGACCTTGTTTGTCAAGAAGGAAAACCTCAAGCAGCTGTTGACCGTACATTAGATAGTAAA GCTTTCAGAGGATGGACAGAAATAGACAATCCATGGACGAATGATGATGAGACTGACAATGGTGCGCTACTCTACATACT AATTTGCTTATAAATTATATCTGATCGTAGTTGTAGTTTATCCTAGTGATTGTGTGAAATATTATATAGTATATTAATCT GAAATGTTGAAATTGGAACTTAGCGTCCGTATATCTGCTTGTGTGGTTTAAATTAGCTTATCTTGTTGAATAGATCTTGT ATACACTAAGATATCTTTATGATTAAATTTCAATTTGATCCATTCTTGGTCTGATCTTTTTAACTGTCAGAAATCGAGTG GCACATGGTTGAAGTAATCTTCATTTTTCACTTCTTGTAAAAGCTTATAACTTTTTTATTAGGTGGCACCATAGGAGATT CACTTCTAGTGTAAAATACTTCGTACTTTGTACACACACTGTTCTTGTGTCAAAAGTAAATCATTTTATAATATTCTGAA TTTCTTACTAAGAAAATAAATGTATCAATTGAACGATTGTGTGTGTTTGTAGATGAGATGACTTATGTTAATCTTCAACT GAATCCTGAAAGATATACTGGTTACACTGGTCCATCTGCAAGAAGGATTTGGGATGCTGTCTACTCTGAGAACTGCCCCA AATGTAAGTTGCCTTCAGAAAGCTTATGCACATCAATTGCCTGTGCTTTTAGGTAGTTAGATGATACCTTTCCTATTATC AAATATTGAAGGACCAATAACTATGAATGTGTCTCTATGTACGGAGTAAATACTTCCTTTTAAATGTTGCATTTCTTTTA ATCATCTAATGTTTTATTTATCACCTGTGGAGCGGATATTAGTCATATCCTCTGGTTCATAGATGTTGGGAGCCATATGC AAAGCCCCTGAGACACCTAAGTGTTCATCCTTAATAATCACAAAAAAGTTTGTCTTTTGTAGATCCATCACAGGAGTCAT GCCAGGAGGAAAAGATTTTGTATAAATTGATATCAGGTCTTCACTCCTCCATATCGATACATATAGCTGCTGATTATCTA CTTGATGAAGCTACAAATTTGGTAAATATCATGTTCCTCTCTTCAGCAGTAGCTAATTTTCTGTTTGAAAGAGACATTTG CATTGCTTTTGAGGAATTAATAGTTTACTGCATATTTGACCAAGTAGGTAGACTACTGTTCGTCCTTGGTTTCTGTTTTA CAGCCAAAAGTAATGGATCTTGTAAAATGACTTCTGTGATTTTTTATGCACTAAAATAATTTGGCAACATTGTAAATGTG AATATAATAAAATACAGTTCTTACTGAAGAAAAGCATATTTAAATCTCTAACTTCTCCTTCTTTTTTATTATTTCAGTGG GGCCAAAATCTATCTTTGATGTATGATAGAATCATGAAATACCCTGATCGTGTCAGAAATTTGTATTTCACTTATCTCTT TGTCCTGAGAGCAGTAACCAAAGTAAGTATGAATTATCCTGGTTTTAAAATCACACTCAGTACATTCATAGATGGATCAA TCTTAATTTTTTTTATTTTAGATATACTAGTTAAAAGTAATCTTCATGCAATCTATATTCCACTCCAGGCTGCAGATTAT CTGGAACAGGCTGAGTACGACACTGGTAATCCTAATGAGGACCTTAAAACACAGTCGTTGATAAGACAGCTACTTTACAG CCCCAAGCTCCAAGCTGCGTGTCCAGTTCCATTTGATGAAGCTAAGCTGTGGAAAGGCCAAAGTGGACCTGAACTGAAAC ATAAAATTCAACAGCAATTCAGAAACATAAGGTATCAACTGAAAAATATTGGACTTATCTCTGGCCTTAATACTATCCAT TGATAGTTTTAGAGTTTTATTGTTGTTTATGCTCTAGTGATCATGCTGTATGGTACTCCCAAATATGTAGGAAAGATAAT GGGTTTATGATGACTCTTATTAAGGCGTATCTTAGAATTCGGGTTAGGCCTAAATCTACCCCAAGCTAACTTAGGGATGA TGATTTCTCTACCCATTATAAGGACTTATTTGGCCTTATCTCTAGTCAATGTGAGATGGAAGTTGCTTTTTGAATTTCCA CCTATTGGTGGATGGATATTAGATAGGGTTAAGTTAACTGATTTTTAAGAGGCTGATCTGAACATAACTTTTAAGTTTTC ACTGTAGGAAAATGACTAAACAATTACTACACGTTCTGCTCTGCATATATTGTTCTGCCACCGTTTCTATTTACATGCTA CTTCATTTCATAATCTCATTGACATTGGAATGCAGTACATTGATGGATTGTGTAGGATGTGAGAAGTGTCGGTTATGGGG AAAGCTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCACTGTTGATGGTCAAGAAAACTTGGATCAAACAG TAAGTACATTTGCTGGAGCCTTTCTTTTTTCCTCCCTCTTGTGGTTGCTACCTTTATGCATGTCGCCTTGACTCATATTG CTTCTGCATTCTGCAATGACCTTTAACTACATTATGCTTCCACTTAAATCTTTTACTGAAGCAGATACATCTTCTCTATT CTGTTTTCCTGTCCTGCTGCGGGGATATAATTGATAATTTGATAGTTAAATTAAGAAGTTGTAATCCAGCGAAGTATTTC CCTCTTATAATAGAAAAGTTTCTGGGTCTTCAGCTTGTATATTATTTTTTTGTGTAAATGACTCATCAATTTTTGTCTGT TACATACATCTCCCCTCTATTTTACTATGAATAGTAAAACATGATTGACTGACCCTTTGTGTTGCACTTGACGATGATCT TTCAGCTGCAGCTACAAAGGAATGAAGTAATTGCATTGATGAATCTTCTCAATAGACTTTCAGAGTCGGTCAAATTCGTC CATGAGATGGGACCTACTGCTGAAAGAGTCATGGAAGGACACCTTTCTGTACATTCAAAATTGATATACTCATGGAACAA ATTTTGGTCTCATGTACTTAAAGCTTAGGTCACATTCTCTCTTCTGTGTATTTGTTGCTCTTCCTTCGGGCTATTGTTTG GTGTGGCTAACTGAGTGTTGCATTTGATATCTGCAGGCAGGCAGCGACAGGTGATAGTTTGGTTTTTGTGATTTTTGACT CACATTACTCCAAACAATGAGGCTTAGGAAACTATGGTCTTGGTTTGAAAATTTTCCGAGGATGTAACAGTAATGTATGT AACATGTCTCAACATTGAAGATAAATGATAGTTATACAGGGGAAAAACTGAATGTAGTGGAAGATATGTCATTTGGGATG TAATCCCACTAATTTTACTGAACATTCTTTTTTTGGTACAATGTTGACATATATCGCAACATGAAAATAAATCCACATGT TATGTCATTTATAAATCTTAAGGTTGACATATATCGCAATTTTTTACATGTAAGGTGACATGAATCTTCTTCACTTGTAA TTCGCATACAAAATTATCATCAACATCAACCATTATGTTAGTTAATGGATAACAAATCAATATTTGGACCTAAATTGCTC TACTTTGAAAGTAGAGGAACTTAAAGCAATTGAAGCATTTCTAAAACTATATGCACCAGAAGTGTAACTAAGCAAGTTAA AATGGACAATTACTACTATAACCAAAAGTGTAACTAAGCAAGTTAAAATGGACAATTACTACTATAACCAAAAGTGTAAC TAACCATGTTAAAATGGACAATTACTGCTATCATGTTAGTAATTGGCGAAGATTAGGGCAGTTCCTTTCTTTAGACGACC GATAGTCCCAGTGTTCTATTTGGTAAT
CDS sequence (LotjaGi6g1v0211900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAAACCGACGGTGACAAGAAGAGGGGTTTCGGAACCAGATGGCTTTGGCTGGTGGTTGCTCTTGTCGCCGCCTT TGTTGCCATGGCTGTGTCTTCCAAAACTTCTTCCAAGATAGCTCTCTTTGGAGCAATTGATAGAGCATGTCACTGTGCTC GGGGTACACCAAAGTACAGTGGCATGGTGGAGGATTGTTGTTGTGATTATGAAACTGTGGACCGTCTCAATGAGGAAGTG TTGAACCCATCCCTCCAAGAACTTGTGAAAACACCATTCTTTAGATATTTTAAGGTTAAATTATGGTGTGACTGCCCTTT TTGGCCTGATGATGGTATGTGTCGGCTGCGGGATTGTAGTGTATGTGAGTGCCCGGACAGTGAGTTCCCCGAATCATTTA AGAAGCCCAAGCGCCTTTCGTTGAATGACCTTGTTTGTCAAGAAGGAAAACCTCAAGCAGCTGTTGACCGTACATTAGAT AGTAAAGCTTTCAGAGGATGGACAGAAATAGACAATCCATGGACGAATGATGATGAGACTGACAATGATGAGATGACTTA TGTTAATCTTCAACTGAATCCTGAAAGATATACTGGTTACACTGGTCCATCTGCAAGAAGGATTTGGGATGCTGTCTACT CTGAGAACTGCCCCAAATATCCATCACAGGAGTCATGCCAGGAGGAAAAGATTTTGTATAAATTGATATCAGGTCTTCAC TCCTCCATATCGATACATATAGCTGCTGATTATCTACTTGATGAAGCTACAAATTTGTGGGGCCAAAATCTATCTTTGAT GTATGATAGAATCATGAAATACCCTGATCGTGTCAGAAATTTGTATTTCACTTATCTCTTTGTCCTGAGAGCAGTAACCA AAGCTGCAGATTATCTGGAACAGGCTGAGTACGACACTGGTAATCCTAATGAGGACCTTAAAACACAGTCGTTGATAAGA CAGCTACTTTACAGCCCCAAGCTCCAAGCTGCGTGTCCAGTTCCATTTGATGAAGCTAAGCTGTGGAAAGGCCAAAGTGG ACCTGAACTGAAACATAAAATTCAACAGCAATTCAGAAACATAAGTACATTGATGGATTGTGTAGGATGTGAGAAGTGTC GGTTATGGGGAAAGCTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCACTGTTGATGGTCAAGAAAACTTG GATCAAACACTGCAGCTACAAAGGAATGAAGTAATTGCATTGATGAATCTTCTCAATAGACTTTCAGAGTCGGTCAAATT CGTCCATGAGATGGGACCTACTGCTGAAAGAGTCATGGAAGGACACCTTTCTGTACATTCAAAATTGATATACTCATGGA ACAAATTTTGGTCTCATGTACTTAAAGCTTAG
Protein sequence (LotjaGi6g1v0211900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKTDGDKKRGFGTRWLWLVVALVAAFVAMAVSSKTSSKIALFGAIDRACHCARGTPKYSGMVEDCCCDYETVDRLNEEV LNPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPDSEFPESFKKPKRLSLNDLVCQEGKPQAAVDRTLD SKAFRGWTEIDNPWTNDDETDNDEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPKYPSQESCQEEKILYKLISGLH SSISIHIAADYLLDEATNLWGQNLSLMYDRIMKYPDRVRNLYFTYLFVLRAVTKAADYLEQAEYDTGNPNEDLKTQSLIR QLLYSPKLQAACPVPFDEAKLWKGQSGPELKHKIQQQFRNISTLMDCVGCEKCRLWGKLQVLGLGTALKILFTVDGQENL DQTLQLQRNEVIALMNLLNRLSESVKFVHEMGPTAERVMEGHLSVHSKLIYSWNKFWSHVLKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 7 | 447 | 441 | 5.0E-260 | ||
| PANTHER | 7 | 447 | 441 | 5.0E-260 | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| PIRSF | 12 | 463 | 452 | 2.4E-136 | ||
| Phobius | 16 | 27 | 12 | - | – | |
| Phobius | 28 | 31 | 4 | - | – | |
| Phobius | 32 | 463 | 432 | - | – | |
| SUPERFAMILY | 68 | 438 | 371 | 1.26E-131 | ||
| Pfam | 81 | 428 | 348 | 1.6E-125 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein disulfide isomerase activity | Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins. | ||
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Molecular function | Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0211900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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