Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0212800 |
| Transcript ID | LotjaGi6g1v0212800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G30440.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9S9Q9|Y1044_ARATH BTB/POZ domain-containing protein At1g30440; TrEMBL-Plants: tr|A2Q365|A2Q365_MEDTR BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3; Found in the gene: LotjaGi6g1v0212800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51060252..51065379) extracted from Lotus japonicus Gifu genome v1.2.
AATGGAAACTCAACTCAGTTTTTCTGAAAACCCAAGTCCGTTACCCTAACGCATGCACATGGCCTAGCTACTCACAAACC GACACTATCGTAGTAATAAACAAAAACCTTAATAAATACAAAGAACAGAACGTTTCCACTGTACTACTGTTTCTTCCAAA GTCAAATCGATTTTTTTAAGTGCTTCATTAGAGAGATTCTTAGCTCGAGAAACCAAGCAATGAGTATGTTTCAAGCCACG GACCCCACATGCATATGCCATTGCTGCCATTAATGATGATCATAACAACCCATTTTCTTAATGCTGCATTTTTTTTCTAT TAAACCATACAGTGAGTCATTTTTGTAGTTTTTCTCATCTGGGTATGAGTTGTTTTTGGCTCTTGTGTCTTGTTTAGGTA ATGGGTTGGTTTTGAATTTTGAAAGTTTAATTTTTGTTATGTGGGTTGTTGACCTAAACTAGGTGGATGGGATAAGGAAC CATTTGGGTTTGATTTTGTGGTGGTGGCTGCTATTGGAGTGGTTCTGGTTCTAGGGTTTTTTTTCTGGTGGGGGATTTGG CTCTTTTGGTTTGGTGGGTTGCTGGGAATTTTGATAAAGGTTTGGAAGGAGCTGCATTGTGAATCAATTTCAAGGCTGAA ATTTGAGGGGAATTGCTTCTTGAATTGTTAGTGTTGGAAGCTTCATTTGGTGCTGGTTAGGGATTTCAGCTTGATACAGT GTTTCAGAAGGGTTTTGGATCCGTTCTTGACTTGGTTTCTGTTATTGAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTAT CTTTTTGGGATTTGACTAGATGGCTTGCGTGAAATTGGGTTCCAAAGCTGATGCGTTCCACCGTCAAGGGCAGGCCTGGT ATATAGCCTAATTTAACCCTTTTTGTGCTCTGTCAATTAGTTTTCTTCTCTATTACTTATTCTAAAATTGATGTTCTTTG TTGAAATGTTTGTGTCTCGTGAACTCTAGGATTAGGAAGAATATGTTTAGATACTTTTAAGTCATCGGTTTACTGAATGG TTGCTTGATATGCCTCATTGAGTGATAATTGGTGGTTTAGAAATTTGAACTCATGTTAATGTTTGGTAATGGGCTATGGT GCTAATAATTAATTTTGTGAAGGTCTTATTTGTCTTGCTTGGTCGATCCTTCTATGTCAAATCCGGGATTGGTTACTGGA GGTTTGGATGTAAAGTTTAATTTGTCAAATATCATGTATGCATTGGCATGGATGTGCCTCTATGCCACTTTTGAGACGGA GTCAAGGAAACCTTTTGCATGATAGGCATGAATCCTGTTAAATGACCTTGCAAAGTGTAATGAACTCCTTAGCGCTACTA CGATTTTGGTTGTTCTATGTTTCTTTTATAGCCTACGCTTTGATAAGTCAGATTGGTGTTTGTTCAACTAGACAGTGAAG GATGGGATTTTTCTTTCTGTCTTGATTCCTAAATTAAGCCATTTAAATGAGACTATTCTTAGTACAGCCTGATTGGAAAT GCATTGTATCTAATGGAACTTCAATGAAATTTAGTCATTTTTACACAATGTATAATATTTTAATGTTTTGACTGCTGTTA TATCCATAGGTTCTGCACAACCGGGCTACCTAGTGATATAGTTGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGG TATATGATATCTATTATCTAGTTCTTTTAACATACTTTTACCACTTATAGTTAGTGCACTATACAGATAGTATTAGCTTA CTTAAATTTCTAGCTTTTTATAGAAGATCTGATTATCCATAAATTCCAAAGTTTACATGAAGATAGACATAACAGAGTTT ACATTAGTACCTTAGCAATATGTTGCTTTACCATGTTATAAAGTATGCTGTCAATTTCTGCGTTGTTCAAAATACTTGAT ATTGATTGATACTGGAATGTGGTTGCAGTTGGTAATGTTTCTTCGCAAAAAGATTACTTGATATTGCATTATTATTATAT TATTGTGTCTTGGGGGATTATGCAAATGAAATGTGCAGAGGGACAGTATTTGGTTCTGGTTTTGGAAAAGCATGCCAATT TATAGTTCAATATTCCTTCATATATTGGCATGTTTGACTTTGCAGTTTATAGAAAATAGCTTTTCTACTAAGAAGCTCTG TCTCAGTATTTTGCGTATAAGCTTTTCTGAATATAAAATAAGCTGACCTGAGTACACACTTAATACAGTTTCCCTTGCTC TCTAAAAGTGGGGTTATGGAAAAACTGATTGCTGAAGCTTCTGAGTCAGAGGAAGAATGTGCCATCCACCTTCCTGATAT TCCTGGCGGGGCGAAAACATTTGAACTTGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTTACTGCGTCCAATGTTG TGCACCTCTGGTGTGCTGCTGAGCACCTTGAAATGACTGAGGAAAATGGTGAAGGTAATCTAATTTCACAGGCCGAAACC TTCTTCAGTCAGGTGGTTCTCCGAAGTTGGAAAGACTCTCTGAGGTCACTTCAAACCTGTGATGATGTTCTGCCTGATGC GGAAAAGCTCCACATTGTGAAAAGGTGCATTGAATCACTTGCTGCAAAGGCATCTACTGACCCAAATTTATTCGGGTGGC CAGTACTGGAACGTGGTGGGCCTTTGCAGAGCCCTGGCGGAAGTGTCTTGTGGAACGGAATAAGTACTGGGGCAAGACCA AAGAATTCAAGTGCAGATTGGTGGTATGAGGATGTAACAAATTTGAGTTTACCTATTTATAAGAGGTTGATAGCTGTTAT GGAATCTCGAGGAATTCGGCAGGAGATCATTGCTGGTTCTCTTGCTTTCTATGCTAAAATGTATCTACCAGGGTTGAATA GACGCCAGGTTTCTGGTGAGTCCAGCACCCGTCTGACACAGATGGCTTTGGGGTCTCCACCGTGTGAAGAAGACCAGAAG ATTCTACTGGAAGAGATTAACCGGTTACTCCCATTGCAGAAGGGCCTGGTCCAAACAAAGTTCCTCTTTGGTCTACTTCG AACAGCCATGATTCTACGAGTGGACTCCTCTTGCATATCAGATTTGGAGAAACGTATTGGGATGCAGCTTGATCAAGCTA ATCTGGAAGATCTCTTGATGCCAACTTTCTCATACTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTT GAGAATTTCCTTGCCATGGATCAGGCTACAGGTGCTGCCTCTCCATGCTCAATTGATGATGGCGAGTTGATGGGATCGCC TTCATTAACGCCAATCACCATGGTAGCCAAGCTGATCGATGGTTACCTGGCAGAAGTTGCCCCAGATGTTAACTTAAAAC TTCCCAAGTTTCATGCCCTTGCTGCTGCTGTTCCTGAGTATGCCAGGCCTTTAGATGATGGTTTATATCGCGCTATAGAT ATTTTTTTGAAGGTACGTATCTAGAGCAAGTTATATTATAATATGTTTTGGATGTGGTATATAGAGCCCATTTGGGTACG GATTTATTGGAGTTTATCTACTACAAAAAACACTAGATAAGCTCCAATAAGTGCTCTTTGGTTTGCATTCAAATGGTTCC TAAGCTAAATTTGTAGCACTATATATGTTTGTCTAATACTATTGTCAATTCTGCTTTATTTAATTATTGTCCTTGATTTG AGTGAGAATACCTTACCCACACATATTTATCTATAATCAAGGTATCATATCGCGGTCATCTTTGTAGTCAGTTTTCAAAT CATATTCTGTTCCTTTTATTTCACATCATTTAGCACTAGTTAGCATCATTTTCTGGTAGTCATTTATAGCATGTTTGGAT TAGTTTCTCTTTCATTAGAATCAATTATGAAACTTAGAAGCTTCTCCCCATAATTGATTTTGGCTTAAGAGTCTATTGTA TAAGGGTTTCCAAACATGCACGAGGGCTTAAGAACATATTTTGCCAATTGTGAACTTCGAACTACTTTGGACTGATTCAC TGTTTCTGTCTGTCACACAAAACTGCAGTCTCACCCGTGGTTAGTGGAGTCTGAGAGAGAGCAACTGTGCAGGCTGATGG ACTGCCAGAAGCTCTCACTAGAAGCATGCACGCATGCTGCGCAGAACGAGAGGCTACCCATTAGAATAATAGTTCAAGTT CTATTCTTCGAGCAGCTCCAGCTCCGGACTTCAATCGCTGGTTGCTTCCTGGTTTCAGATAATCTCGATGGATCGAGACA GCTAAGAAGTGGTTTTGTCGGGTCCAACGAGGGTGGCGGCGGCTGGGCGTCCGCGGTGAAGGAAAATCAGGTTTTGAAAG TGGGAATGGATAACATGAGGATGAGGGTGTCAGAGCTTGAGAAAGAGTGCTCAACCATGAGGCAGGAGATTGAGAAACTG GGTCGTTCAACAAAGGGATCATCATCGAGCACTTGGGGAGCTGTGTCCAAGAAGCTCGGGTTTAAGATGAAGTCTCAGAT GTGCAGTGCTCAAGAAGGATCCGTTAGCAACCAGAACAATGGAAGTAATAAGGTTGTGAAGTTGAAGGAGAGACAAGTTA AGCACCAGAGAAGTTCTTCCATTAGTGATAAAGCTTCACTCTCTTCAATTGTTCTTTCTTAGTGTCTGCATTTTCATTTA TTTACTGAAGTTATTTTTTTCTTTCTTATTTCTCTTATGTTACTATGTCATATTGGTTAAACAGTTTCTTTGCCTCTGCA TGTCAAGAAAGTGTAGATGGAAACAAAGGTCCTCTGTAGTTGCAAGTGTAAACCTTAGCTTTAGTTTCTTCTTCTCTTCC CACTGCTTGTATGCACATTACACTTCCTCCTGCTTATTCAAAATATTCATATGTTTGAAATTTTAAAAGGGTATGCTCAT TTCTTTTCTTCAGTCCTTGAATCACATACAAAAAATTCAATGGGTGAGATCTAATGAACTTTATGAATATTTTATAATTC CACTATTTTTTGTTGTTTTCTTAAAACCAGCTATTGCATTCCACTTTATTTTCTTACACTTTATCTCCTAAAGCACAGAG TAGCCAAATTACAATTATAATAATCTTTATAATAGAAGGCACATTCTTCCACCACTTCCTTATTCATAATTTATTGTTTG TGTTTTAT
CDS sequence (LotjaGi6g1v0212800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTGCGTGAAATTGGGTTCCAAAGCTGATGCGTTCCACCGTCAAGGGCAGGCCTGGTTCTGCACAACCGGGCTACC TAGTGATATAGTTGTTGAAGTTGGTGAGATGTCCTTCCATCTTCACAAGTTTCCCTTGCTCTCTAAAAGTGGGGTTATGG AAAAACTGATTGCTGAAGCTTCTGAGTCAGAGGAAGAATGTGCCATCCACCTTCCTGATATTCCTGGCGGGGCGAAAACA TTTGAACTTGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTTACTGCGTCCAATGTTGTGCACCTCTGGTGTGCTGC TGAGCACCTTGAAATGACTGAGGAAAATGGTGAAGGTAATCTAATTTCACAGGCCGAAACCTTCTTCAGTCAGGTGGTTC TCCGAAGTTGGAAAGACTCTCTGAGGTCACTTCAAACCTGTGATGATGTTCTGCCTGATGCGGAAAAGCTCCACATTGTG AAAAGGTGCATTGAATCACTTGCTGCAAAGGCATCTACTGACCCAAATTTATTCGGGTGGCCAGTACTGGAACGTGGTGG GCCTTTGCAGAGCCCTGGCGGAAGTGTCTTGTGGAACGGAATAAGTACTGGGGCAAGACCAAAGAATTCAAGTGCAGATT GGTGGTATGAGGATGTAACAAATTTGAGTTTACCTATTTATAAGAGGTTGATAGCTGTTATGGAATCTCGAGGAATTCGG CAGGAGATCATTGCTGGTTCTCTTGCTTTCTATGCTAAAATGTATCTACCAGGGTTGAATAGACGCCAGGTTTCTGGTGA GTCCAGCACCCGTCTGACACAGATGGCTTTGGGGTCTCCACCGTGTGAAGAAGACCAGAAGATTCTACTGGAAGAGATTA ACCGGTTACTCCCATTGCAGAAGGGCCTGGTCCAAACAAAGTTCCTCTTTGGTCTACTTCGAACAGCCATGATTCTACGA GTGGACTCCTCTTGCATATCAGATTTGGAGAAACGTATTGGGATGCAGCTTGATCAAGCTAATCTGGAAGATCTCTTGAT GCCAACTTTCTCATACTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGAGAATTTCCTTGCCATGG ATCAGGCTACAGGTGCTGCCTCTCCATGCTCAATTGATGATGGCGAGTTGATGGGATCGCCTTCATTAACGCCAATCACC ATGGTAGCCAAGCTGATCGATGGTTACCTGGCAGAAGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTTCATGCCCT TGCTGCTGCTGTTCCTGAGTATGCCAGGCCTTTAGATGATGGTTTATATCGCGCTATAGATATTTTTTTGAAGTCTCACC CGTGGTTAGTGGAGTCTGAGAGAGAGCAACTGTGCAGGCTGATGGACTGCCAGAAGCTCTCACTAGAAGCATGCACGCAT GCTGCGCAGAACGAGAGGCTACCCATTAGAATAATAGTTCAAGTTCTATTCTTCGAGCAGCTCCAGCTCCGGACTTCAAT CGCTGGTTGCTTCCTGGTTTCAGATAATCTCGATGGATCGAGACAGCTAAGAAGTGGTTTTGTCGGGTCCAACGAGGGTG GCGGCGGCTGGGCGTCCGCGGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCAGAG CTTGAGAAAGAGTGCTCAACCATGAGGCAGGAGATTGAGAAACTGGGTCGTTCAACAAAGGGATCATCATCGAGCACTTG GGGAGCTGTGTCCAAGAAGCTCGGGTTTAAGATGAAGTCTCAGATGTGCAGTGCTCAAGAAGGATCCGTTAGCAACCAGA ACAATGGAAGTAATAAGGTTGTGAAGTTGAAGGAGAGACAAGTTAAGCACCAGAGAAGTTCTTCCATTAGTGATAAAGCT TCACTCTCTTCAATTGTTCTTTCTTAG
Protein sequence (LotjaGi6g1v0212800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACVKLGSKADAFHRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSKSGVMEKLIAEASESEEECAIHLPDIPGGAKT FELVAKFCYGVKLELTASNVVHLWCAAEHLEMTEENGEGNLISQAETFFSQVVLRSWKDSLRSLQTCDDVLPDAEKLHIV KRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVTNLSLPIYKRLIAVMESRGIR QEIIAGSLAFYAKMYLPGLNRRQVSGESSTRLTQMALGSPPCEEDQKILLEEINRLLPLQKGLVQTKFLFGLLRTAMILR VDSSCISDLEKRIGMQLDQANLEDLLMPTFSYSMETLYNVDCVQRILENFLAMDQATGAASPCSIDDGELMGSPSLTPIT MVAKLIDGYLAEVAPDVNLKLPKFHALAAAVPEYARPLDDGLYRAIDIFLKSHPWLVESEREQLCRLMDCQKLSLEACTH AAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSNEGGGGWASAVKENQVLKVGMDNMRMRVSE LEKECSTMRQEIEKLGRSTKGSSSSTWGAVSKKLGFKMKSQMCSAQEGSVSNQNNGSNKVVKLKERQVKHQRSSSISDKA SLSSIVLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 634 | 634 | 0.0 | ||
| PANTHER | 1 | 634 | 634 | 0.0 | – | |
| SUPERFAMILY | 16 | 114 | 99 | 4.55E-18 | ||
| CDD | 19 | 122 | 104 | 4.27282E-45 | – | |
| Gene3D | 20 | 173 | 154 | 7.4E-13 | – | |
| Pfam | 27 | 113 | 87 | 2.8E-8 | ||
| ProSiteProfiles | 28 | 97 | 70 | 11.647 | ||
| Pfam | 213 | 478 | 266 | 2.3E-94 | ||
| ProSiteProfiles | 213 | 502 | 290 | 92.343 | ||
| Coils | 544 | 578 | 35 | - | – | |
| MobiDBLite | 605 | 621 | 17 | - | – | |
| MobiDBLite | 605 | 648 | 44 | - | – | |
| MobiDBLite | 634 | 648 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0212800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…