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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0216300 |
| Transcript ID | LotjaGi6g1v0216300.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine synthase; TAIR: AT3G17390.1 S-adenosylmethionine synthetase family protein; Swiss-Prot: sp|A4ULF8|METK_MEDSF S-adenosylmethionine synthase; TrEMBL-Plants: tr|A0A1J7GAD4|A0A1J7GAD4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0216300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51825007..51826330) extracted from Lotus japonicus Gifu genome v1.2.
TGGAGGAATTGTCATTGTTTTGCTGCATTTCTTGATTTTTCTAAGCTAGATTTGAACTTGGACTTGGACATGGTTGTGAT TTGTTGATTACACTGTTTGACCTAATTTGATTTTTTATTTTTGTGCAGAACTGTAAAAGATGGCCATGGAAACTTTCCTA TTCACATCTGAATCAGTGAACGAGGGACACCCTGACAAGCTCTGCGACCAGATCTCCGACGCGGTGCTCGACGCTTGCCT GGAACAGGATCCAGACAGCAAGGTGGCCTGTGAAACCTGCACCAAGACCAACATGGTGATGGTCTTCGGTGAGATCACAA CCAAGGCCAACGTCGACTATGAGAAGATTGTGAGAACCACTTGCAGGAACATCGGCTTCGTCTCCGACGATGTCGGTCTC GATGCCGATAACTGCAAGGTTCTTGTTAACATTGAGCAGCAGAGCCCTGATATTGCCCAGGGGGTTCATGGACATTTGAC GAAGCGGCCGGAGGAGATCGGAGCCGGTGACCAGGGGCATATGTTTGGGTATGCTACTGATGAGACACCGGAGCTTATGC CGTTGAGCCATGTCCTCGCGACGAAGCTCGGTGCTCGTCTTACTGAGGTGAGGAAGAATGGGACTTGCCCATGGTTGAGG CCTGATGGGAAAACCCAAGTTACTGTTGAGTATTTCAATGAGAAGGGTGCCATGGTTCCGATTCGTGTCCACACCGTGTT GATCTCGACTCAGCATGATGAGACTGTGACAAATGATGAGATTGCTGCTGATTTGAAGGAGCATGTGATCAAGCCTGTGG TTCCTGAGAAGTACCTTGATGAGAAGACCATTTTCCATTTGAACCCTTCAGGCCGTTTCGTGATCGGTGGGCCTCACGGT GATGCCGGTCTCACCGGTAGGAAGATCATCATTGATACCTATGGAGGATGGGGTGCTCATGGTGGTGGTGCTTTCTCTGG AAAGGACCCAACTAAGGTGGATAGGAGTGGTGCTTACATTGTGAGACAAGCTGCTAAGAGCATTGTTGCCAATGGACTTG CTAGGAGGTGCATTGTGCAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTGTTTGTTGACAGTTATGGAACA GGGAAGATCCCTGACAAGGAGATTCTCCAGATTGTGAAGGAGACCTTTGATTTCAGGCCTGGCATGATCTCCATCAACCT TGATCTCAAGAGAGGTGGGAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGCAGGGATGACACTGATTTCACAT GGGAGGTTGTCAAGCCCCTCAAGTGGGAGAAACCTACTGCCTAA
CDS sequence (LotjaGi6g1v0216300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGGAAACTTTCCTATTCACATCTGAATCAGTGAACGAGGGACACCCTGACAAGCTCTGCGACCAGATCTCCGA CGCGGTGCTCGACGCTTGCCTGGAACAGGATCCAGACAGCAAGGTGGCCTGTGAAACCTGCACCAAGACCAACATGGTGA TGGTCTTCGGTGAGATCACAACCAAGGCCAACGTCGACTATGAGAAGATTGTGAGAACCACTTGCAGGAACATCGGCTTC GTCTCCGACGATGTCGGTCTCGATGCCGATAACTGCAAGGTTCTTGTTAACATTGAGCAGCAGAGCCCTGATATTGCCCA GGGGGTTCATGGACATTTGACGAAGCGGCCGGAGGAGATCGGAGCCGGTGACCAGGGGCATATGTTTGGGTATGCTACTG ATGAGACACCGGAGCTTATGCCGTTGAGCCATGTCCTCGCGACGAAGCTCGGTGCTCGTCTTACTGAGGTGAGGAAGAAT GGGACTTGCCCATGGTTGAGGCCTGATGGGAAAACCCAAGTTACTGTTGAGTATTTCAATGAGAAGGGTGCCATGGTTCC GATTCGTGTCCACACCGTGTTGATCTCGACTCAGCATGATGAGACTGTGACAAATGATGAGATTGCTGCTGATTTGAAGG AGCATGTGATCAAGCCTGTGGTTCCTGAGAAGTACCTTGATGAGAAGACCATTTTCCATTTGAACCCTTCAGGCCGTTTC GTGATCGGTGGGCCTCACGGTGATGCCGGTCTCACCGGTAGGAAGATCATCATTGATACCTATGGAGGATGGGGTGCTCA TGGTGGTGGTGCTTTCTCTGGAAAGGACCCAACTAAGGTGGATAGGAGTGGTGCTTACATTGTGAGACAAGCTGCTAAGA GCATTGTTGCCAATGGACTTGCTAGGAGGTGCATTGTGCAGGTTTCCTATGCCATTGGTGTGCCTGAGCCTTTGTCTGTG TTTGTTGACAGTTATGGAACAGGGAAGATCCCTGACAAGGAGATTCTCCAGATTGTGAAGGAGACCTTTGATTTCAGGCC TGGCATGATCTCCATCAACCTTGATCTCAAGAGAGGTGGGAACAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGCA GGGATGACACTGATTTCACATGGGAGGTTGTCAAGCCCCTCAAGTGGGAGAAACCTACTGCCTAA
Protein sequence (LotjaGi6g1v0216300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRTTCRNIGF VSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN GTCPWLRPDGKTQVTVEYFNEKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRF VIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSV FVDSYGTGKIPDKEILQIVKETFDFRPGMISINLDLKRGGNRFLKTAAYGHFGRDDTDFTWEVVKPLKWEKPTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 393 | 393 | 3.1E-163 | ||
| PANTHER | 3 | 394 | 392 | 4.3E-272 | ||
| PANTHER | 3 | 394 | 392 | 4.3E-272 | – | |
| Hamap | 4 | 394 | 391 | 50.597 | ||
| SUPERFAMILY | 5 | 111 | 107 | 3.73E-47 | ||
| Pfam | 6 | 103 | 98 | 8.3E-43 | ||
| CDD | 7 | 385 | 379 | 0.0 | – | |
| TIGRFAM | 7 | 387 | 381 | 2.5E-165 | ||
| Gene3D | 7 | 242 | 236 | 7.6E-171 | – | |
| Gene3D | 13 | 279 | 267 | 7.6E-171 | – | |
| Gene3D | 104 | 383 | 280 | 7.6E-171 | – | |
| SUPERFAMILY | 117 | 241 | 125 | 2.16E-52 | ||
| Pfam | 119 | 240 | 122 | 3.6E-47 | ||
| ProSitePatterns | 121 | 131 | 11 | - | ||
| Pfam | 242 | 382 | 141 | 7.0E-62 | ||
| SUPERFAMILY | 242 | 391 | 150 | 1.69E-61 | ||
| ProSitePatterns | 268 | 276 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methionine adenosyltransferase activity | Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | S-adenosylmethionine biosynthetic process | The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism. |
Expression pattern of LotjaGi6g1v0216300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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