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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0222300 |
| Transcript ID | LotjaGi6g1v0222300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF581 family protein; TAIR: AT1G74940.1 cyclin-dependent kinase, putative (DUF581); Swiss-Prot: sp|Q8LGS1|MARD1_ARATH Protein MARD1; TrEMBL-Plants: tr|I3S700|I3S700_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0222300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52699581..52701200) extracted from Lotus japonicus Gifu genome v1.2.
CAATTATATTAGAACCCCTAAGAAACCTTCCTAGCTATTTGGTCTTATAAAATACACTCCCATATCTCACCCTTAGTCTA GCACAAACTCCTATCTCCTCCCTCAATTCTCTCCACAAATTCTTGTCATGTTGGGCAAGAGATCCCAGCTACTAATCCGA AAAGTTTCAGAATTATTAGTTTTCGGTGACGGCGGTGCCGCCGCGCTTCTGGACACCATGGAAAGCCCAAGAAGCCCGTT TGAGCTGAACTCACCTAGAGGTATGAAAAAAAGCTACGATTCTGGCGGTGTTGGACTGGGAATTGTGGCGGCTCTTGACA AATCCCAGCAGCACCATGAGGTTCTTCTGCCCAAACCTGCTGTTTGTTCTGGACCAATCCCAGTTCAAACCGTGAAACGT GATAATCAGTTTCCAAAGATTGTTGTTGGAAGCCCAGAGGATTACACCTATGTGACTTACCATGAACCCAACAAAACCGC CACAAAGGTGGTTTACTATGATGGTGGTGAAGGTAGAATTTTCAGACATGGTTATGAATATGATATTAAAAACAAGAACA AGGTTGGTGTTTTCAGAAAAACCCCACCAACGCAAACTTCAGTGAAAGCTGAATCATTATTTCCCACCTCGGATTTTCTA AGTTCATGTCATCTATGCAGAAAGAAACTACATGGAAAAGACATATACATGTACAGGTACTACTACTACTATTACTAGTA TAAATTTGATAACTTCATTTGAATTTGGATTGTGGGACTTGGATTTATGAGTCAAATTTATTTTTAATGTGCAGAGGAGA GAAAGCATTTTGCAGTACAGAGTGTCGTTCAAGTCAGATAACGATGGACGAGCGCAAAGAGCGGTGTAGATCAAAAGCTT CAAGGTCTGTGGAGTTGTCAAGCTCTCAAAATTCAAGGGATCAAATGTTTTCAACTGGGATTGTGGCCCTTTAGCATTTG GTATCTATATCTATCAGTGGAAGATTCATAATTTGATGTATATGTGCCAAATCTTGGTTGTAGTAGCCAAAAGGAAAATT TTGATACAAAAAATAGAGATTTTGGTGTAGTGAAGACTAAAATGGCTTCATTTTTTGATCCTTGTTGTTATAGAGAATTA CGAACTTGAGATCTCAATTGCACAGATTTTGTTTGTTTTGTTCCTGAGTTCTGTTTAAAACAAGAACTAGTTAAAATGTT CAATCAATTAGAGATTGTTCCTGAATTCAGTTTTTCTGTTCATGTGGTTTGTTGCTTCTACTGCTTTTCCCTTTCTCCAT TATTTGTTACTTGAGAATTTGAAGTGGAAAAAGAAAAGAGTTTGGGTAGATTTTTTAGATTTGGTGGTAGTTTGATTGAG AGGATAAAATAGTGGAAGAGAAAGAAAAACTTGTGGATCCCACATCTTTTACTTCTCTTTTTAAAAAAGGAGAAAAAGAA CTCTCATTACATTTATTTTTTTTCCATAGACTTTGTCAGATTCTATTCTATGCTTGCTCATCATACCTATTATTTGCCAC TATGCCTCATAATACCTATTATTAATTATTGAAGACATTTTGTTGTTCGAACAGAAAAAAAATACTTCTTTACTCTTTCC CCAATTTTTACCCAATAAAC
CDS sequence (LotjaGi6g1v0222300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGGCAAGAGATCCCAGCTACTAATCCGAAAAGTTTCAGAATTATTAGTTTTCGGTGACGGCGGTGCCGCCGCGCT TCTGGACACCATGGAAAGCCCAAGAAGCCCGTTTGAGCTGAACTCACCTAGAGGTATGAAAAAAAGCTACGATTCTGGCG GTGTTGGACTGGGAATTGTGGCGGCTCTTGACAAATCCCAGCAGCACCATGAGGTTCTTCTGCCCAAACCTGCTGTTTGT TCTGGACCAATCCCAGTTCAAACCGTGAAACGTGATAATCAGTTTCCAAAGATTGTTGTTGGAAGCCCAGAGGATTACAC CTATGTGACTTACCATGAACCCAACAAAACCGCCACAAAGGTGGTTTACTATGATGGTGGTGAAGGTAGAATTTTCAGAC ATGGTTATGAATATGATATTAAAAACAAGAACAAGGTTGGTGTTTTCAGAAAAACCCCACCAACGCAAACTTCAGTGAAA GCTGAATCATTATTTCCCACCTCGGATTTTCTAAGTTCATGTCATCTATGCAGAAAGAAACTACATGGAAAAGACATATA CATGTACAGAGGAGAGAAAGCATTTTGCAGTACAGAGTGTCGTTCAAGTCAGATAACGATGGACGAGCGCAAAGAGCGGT GTAGATCAAAAGCTTCAAGGTCTGTGGAGTTGTCAAGCTCTCAAAATTCAAGGGATCAAATGTTTTCAACTGGGATTGTG GCCCTTTAG
Protein sequence (LotjaGi6g1v0222300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGKRSQLLIRKVSELLVFGDGGAAALLDTMESPRSPFELNSPRGMKKSYDSGGVGLGIVAALDKSQQHHEVLLPKPAVC SGPIPVQTVKRDNQFPKIVVGSPEDYTYVTYHEPNKTATKVVYYDGGEGRIFRHGYEYDIKNKNKVGVFRKTPPTQTSVK AESLFPTSDFLSSCHLCRKKLHGKDIYMYRGEKAFCSTECRSSQITMDERKERCRSKASRSVELSSSQNSRDQMFSTGIV AL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 2.2E-93 | – | |
| PANTHER | 1 | 242 | 242 | 2.2E-93 | – | |
| Pfam | 164 | 211 | 48 | 1.2E-23 | ||
| ProSiteProfiles | 169 | 212 | 44 | 24.734 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0222300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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