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LotjaGi6g1v0224000.1

Overview

Field Value
Gene ID LotjaGi6g1v0224000
Transcript ID LotjaGi6g1v0224000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT1G54100.1 aldehyde dehydrogenase 7B4; Swiss-Prot: sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1; TrEMBL-Plants: tr|I1MHG6|I1MHG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0224000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:52892503..52897259) extracted from Lotus japonicus Gifu genome v1.2.

CCTGCAACAATATTTTTTATTTTTGTAAAAAAAAATATACTTGTTTCTCATTTGGTAAAAAACAAAGTTTCTGACGTGGA GAAGGATAAACAGTGATGTTCTTATCCAATGGTTCAGTTTATCTGATGAGACACGACACGCCACGCCACGTCACAACCAA CGTTCCGTGACTGGTCACGCAACTCTACTCATACAGGTAGCATTATCATCATCACCTTTCTTCTCTGGTCCCACAAAACT CACTTTTTTATTTTTATATATAAATATACCTTAAAAACAACGAAGAAGATCAACACTGTCACAGTTTCACTCACTATCTT CATCAAAGTTCCCGAGAGTGAGTAGTAGCTTCATTTCATTGATTTTGGTTGCAGGAAAATGGGTTCTGATAACAACGATC TAAGCTTCTTGAACGAAATTGGTTTGGGTTCCTCCAACATTGGCTGTTACATCAATGGAAAATGGAAGGCCACTGGTTCA TCTGCCACTTCTGTCAACCCTTCCAACAATCAGGTTCACCCCAACAATTGTTTTCCAGTCAAAATTCATCTTTAATTTAT ATGTGATGGAAAAGAGAGGATTTTTTTGTTTTGTTTGCATGTTTGTTTTTTACTGATCTTGACTGAGTTTTGAACTTGAT TGATTGATTGCATGCTTGTTGAAATTGTTTCTAGGGGTTTTAGTTTTCATTGTTATGTGTCTGATTTTTGCTGTTGATTT GGAATTAGACTACTGCTACTGTGACCGAGGCAAGCATTCAAGATTATGAGGAGGGTTTGCAGGCTTGCAGTGAAGCAGCT AAGACATGGATGACTGTGAGTGTGTTTTTTTTCATCTTGATTTTACATTTTTACTAGTTACATGATAGAATTGTGATAGT GAGTGCTGCATGTTGGTTCTATTGGAAACTAAGTGGGGATTCACTCCTTTCATGTCATGTTTTTGCAGGTTCCGGCGCCG AAAAGGGGTGAGATTGTCAGGCAGATTGGTGAGGCCTTAAGGGCCAAGTTGGATCCTCTGGGTAGGCTGGTGTCTCTTGA GATGGGGAAAATTCTTCCAGAAGGATTTGGGGAGGTTCAGGTGTGGTGAATCTTCTGATTCTGCAATTTAGTAACATGTT GTCTGATGAAAAGATTTAGTATTTGCATTTGTATATGAAAAGTCTTAATCTTTCATTCTATCCATTACAGGAGTTTATTG ACATGTGTGATTATGCTGTTGGGCTGAGCCGACAATTGAATGGATCGATTATACCATCAGAACGTAATTTGTCTATCTAT ATCAATCATCTGTCTTTTCTTCATAATCCATACCATGATTTCTTGTTCGAGATATACATTTGTTTTGGATAATAATTTCT CTCTGAGGTTTTCCTGTTCTGAGTTATTGTTTTCTTGTATTTGTTTCTTTGCAGGTCCAGATCACATGATGTTTGAGGTG CAATTTTTAAACTATAATTGTTCACTAACTTCAGTGCCATCTTATAACAGGATGTATATTCATGAACTGTATTACATGTT TTTGAATCACAGGTATGGAACCCACTAGGAATAGTTGGTGTAATCACTGCTTTCAACTTTCCATGTGCTGTTCTGGGTAT GTTTTTCCTCTCTTCCTGTCTCAAAGCACATAGTAGCTTTATATAAGTGGATGCATGCTGACATTTGTGTGCAGATAGTT TTCTTGAAGCTTTTATCTGACTACATTCTGAATTATATGATCCAATTCTGTACTTTGAAAATATTCTGATGATTTCAGTT ATAATAAAACTTGTTCATCTCCATTGTTCAGGGTGGAATGCTTGCATTGCATTAGTCTGCGGTAACTGTGTTGTATGGTG AGTCTACATATCTATCTCTGGATATTTCATGCGATTAATAAATTGGCTGTCTTTAAGTCAGATCGTTCTTTTATTGTTTC ATGGCATGTTCTGTTTATTTGCATCATTTTCATGTGTGTTTGGCTTTATTGTGGAGGCATTCCATTTGCAAACTTGGTTG GACTAATGCTATATGTAGACTTTTGATCAATGTTCTTGGTCCTATTTTGTCCCCCATGCTCTTTGACTTGAATGACAGTT GAAATCTCAACTCTATGTAACTAGTACTTCAGTTCTTAATGCACTATTGTTTAGTACATGTATTTTGTCAGCATCAATTC ATTTGATTGTTCAGCAAACAAACAGATGATGAGGATTTTCCCTTGATTTTTGGGCTTTCCTGTCTGTTGATAAGTTGGCC TCCAATTTCTCCAATTGCACTTCCTGTGACTTTGGTTCACTTATGATATCTATGAAAATCTGTGATTTTTTTTATGTGAT GCATTGCCACTTTCTTCCTCTGGAGTGTTTCAAAATTTCAATTAAAATTGCTATCTTTTCAATATGAACTTTTCTTTATC ACTGCATCATTGCAGGAAGGGTGCTCCAACAACTCCATTAATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTG AGAGGAACAACTTACCAGGTGCGATATTTACCTCTTTCTGTGGAGGCGCTGACATTGGTCAAGCGATTGCGAAAGACACC CGCATTCCCCTGGTTTCATTTACTGGAAGTTCAAAGGTACTTTCTTTGTCTGCTTACTTGGTCGTCAGACATTATGTTCT AAAATCTAAACGGGTGGCATATTAAACTAATCGAATAGGATGTTCTGATTTCCACATTGCTGGAAGATGTAGTTGTCATC ATGATGCTCTGCTCAGTTTAGCTGCCTATAGTAGTGGTATTTATCTTATTACAGTAATTAATTGTCAAGAAATGTGGTAT CTCATACATTATAACATCAACTCTCTAGTGTGACTACCTCTACATTTATGTATTGTGTAATCATATATGTTGCTCTTGTT CGTCTGTTAAAACACAATATGTGAAGATACTGTGCAAATTTTCACTTATTTCAGTATGATTTGAAGATTACCATCTATAG TGTTAAGTTGCTAATGATATGTTTCCTATTATAGGTTGGCTTGTCGGTTCAGCAAACTGTTAATGAAAGATTTGGCAAAT GCTTGCTTGAGTTAAGTGGTAACAATGCAATAATCGTCATGGATGATGCAGACATCAAACTGGCTGTACGCTCTATTTTG TTTGCTGCTGTGGGTACTGCTGGTCAGCGGTGTACTACCTGCCGTAGACTGGTATTATAACCAATTTCAAAAATTGAATT CCATAATTTTAGTGCTGTCTTATGTAAGTTTTAAGGGTATATATTTATTTCTTAACTTACATTGCATTGTAGTTTCTGCA TGAAAGTATCTACACAAATGCGCTAAATCAACTAAGTGAAGCCTACAAACAAGTCAAAATTGGGAACCCCCTGGAGAATG GGATTCTAGTTGGGCCTTTGCATACGCGCTCTTCAGCTGAAAACTTTCAGAAGGGCATTTCAGTCATAAAGTCTCAGGTA TGTATCTTAGGCTGTAATATTCCATATCTTATCTGTAATTTTGCTAAGTAGTATTTACAGAATTTTGCTCAAATATGATG GATGTTTGTGTTTTTTGTGTGGAGATGGTTTACTAGATACTTTGATTTGATTATCAGGGAGGGAAGATCCTAACTGGGGG ATCTGTATTAGAGTCAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAG AATTATTTGGTCCAGTTCTCTATGTTATGAAATTTAAGGTAGTATATTTATCTAAGATCTTTTATTGAACTTATTTCTTT TGGGGTTTAGTTTCTCATCGACCTTCATGATTTTGCTCATAGACTCTGGAAGAAGCAATTGCCTTGAACAACTCTGTACC TCAAGGATTGAGCAGTTCAATCTTTACACAAACACCTGGATCTATATTCAAATGGATCGGGTAATTGACTTCTTTTTGTT TCTCTTCTACATATCTGCTAGTGAATTTGCTTAGGGACTCAGGTGGTGTTTCATTTGCATAAACAATATAATTTACATGT TGGTGGTTGTAATTATTATGCAGGGCACGGGGTAGTGATTGCGGTATAGTGAATGTTAACATACCAACAAATGGAGCTGA GATTGGAGGTGCCTTTGGTGGAGAAAAGGGAACTGGTGGTGGCCGCGAAGCAGGAAGTGACTCGTGGAAGCAATACATGC GGCGTTCTACATGGTAAGTCGTCATAGTTGAATTTAAGATCTTGCATTCTCTTTGTCCCTTGCTATGAATGTGCTCATGT TCTTAATGACACTAAAATTTTGTGCTTTGCAGTACCATCAATTATGGAAGTGAACTACCCTTAGCTCAGGGAATCAACTT TGGTTAATTCGCAAGCCGTCCATGCACATGGCATGAGGATGCTCAGATGCAACTTTGAGCCATGTTAGGAGGGCATCTTT TCTTCATACCTGATAGCTTAAGACTTGCTGTTTCTATATTGCGCAATTTCGTGGAGAGTTAGTTTTATTTAAAAACAGTA TACTAAAAATAAGCCCATGAGTTGCGTGAATATTTTATAATAAGTGTTTTTTGCCTTTAAATTAGGCTTTTCAATGGAGA AAGAGTGGAATGATTTACCTCTTTTCTTATCACGTTTAACTCTTGTTCATTAAATATTTTATTATCGACAGTAATTTTAG TATGACGATGTCTAACTTATTTCTCTGTGTTATCTAACTGAATTCAGAGTGAACCAATCATTTTAGTCATCCACTTAACT ATAACAATACATTACTATTTGTAGAAATTTAATGATT 

CDS sequence (LotjaGi6g1v0224000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTCTGATAACAACGATCTAAGCTTCTTGAACGAAATTGGTTTGGGTTCCTCCAACATTGGCTGTTACATCAATGG AAAATGGAAGGCCACTGGTTCATCTGCCACTTCTGTCAACCCTTCCAACAATCAGACTACTGCTACTGTGACCGAGGCAA GCATTCAAGATTATGAGGAGGGTTTGCAGGCTTGCAGTGAAGCAGCTAAGACATGGATGACTGTTCCGGCGCCGAAAAGG GGTGAGATTGTCAGGCAGATTGGTGAGGCCTTAAGGGCCAAGTTGGATCCTCTGGGTAGGCTGGTGTCTCTTGAGATGGG GAAAATTCTTCCAGAAGGATTTGGGGAGGTTCAGGAGTTTATTGACATGTGTGATTATGCTGTTGGGCTGAGCCGACAAT TGAATGGATCGATTATACCATCAGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCACTAGGAATAGTTGGTGTA ATCACTGCTTTCAACTTTCCATGTGCTGTTCTGGGGTGGAATGCTTGCATTGCATTAGTCTGCGGTAACTGTGTTGTATG GAAGGGTGCTCCAACAACTCCATTAATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAGGAACAACTTAC CAGGTGCGATATTTACCTCTTTCTGTGGAGGCGCTGACATTGGTCAAGCGATTGCGAAAGACACCCGCATTCCCCTGGTT TCATTTACTGGAAGTTCAAAGGTTGGCTTGTCGGTTCAGCAAACTGTTAATGAAAGATTTGGCAAATGCTTGCTTGAGTT AAGTGGTAACAATGCAATAATCGTCATGGATGATGCAGACATCAAACTGGCTGTACGCTCTATTTTGTTTGCTGCTGTGG GTACTGCTGGTCAGCGGTGTACTACCTGCCGTAGACTGTTTCTGCATGAAAGTATCTACACAAATGCGCTAAATCAACTA AGTGAAGCCTACAAACAAGTCAAAATTGGGAACCCCCTGGAGAATGGGATTCTAGTTGGGCCTTTGCATACGCGCTCTTC AGCTGAAAACTTTCAGAAGGGCATTTCAGTCATAAAGTCTCAGGGAGGGAAGATCCTAACTGGGGGATCTGTATTAGAGT CAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAATTATTTGGTCCA GTTCTCTATGTTATGAAATTTAAGACTCTGGAAGAAGCAATTGCCTTGAACAACTCTGTACCTCAAGGATTGAGCAGTTC AATCTTTACACAAACACCTGGATCTATATTCAAATGGATCGGGGCACGGGGTAGTGATTGCGGTATAGTGAATGTTAACA TACCAACAAATGGAGCTGAGATTGGAGGTGCCTTTGGTGGAGAAAAGGGAACTGGTGGTGGCCGCGAAGCAGGAAGTGAC TCGTGGAAGCAATACATGCGGCGTTCTACATGTACCATCAATTATGGAAGTGAACTACCCTTAGCTCAGGGAATCAACTT TGGTTAA 

Protein sequence (LotjaGi6g1v0224000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSDNNDLSFLNEIGLGSSNIGCYINGKWKATGSSATSVNPSNNQTTATVTEASIQDYEEGLQACSEAAKTWMTVPAPKR GEIVRQIGEALRAKLDPLGRLVSLEMGKILPEGFGEVQEFIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGV ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLERNNLPGAIFTSFCGGADIGQAIAKDTRIPLV SFTGSSKVGLSVQQTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNALNQL SEAYKQVKIGNPLENGILVGPLHTRSSAENFQKGISVIKSQGGKILTGGSVLESEGNFVQPTIVEISPDAPVVKEELFGP VLYVMKFKTLEEAIALNNSVPQGLSSSIFTQTPGSIFKWIGARGSDCGIVNVNIPTNGAEIGGAFGGEKGTGGGREAGSD SWKQYMRRSTCTINYGSELPLAQGINFG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 9 507 499 4.8E-284
PANTHER 9 507 499 4.8E-284
SUPERFAMILY 20 497 478 7.33E-135
CDD 23 496 474 0.0
Pfam 34 489 456 1.1E-131
Gene3D 38 483 446 2.0E-152
ProSitePatterns 265 272 8 -
Gene3D 269 460 192 2.0E-152

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0224000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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