Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0238100 |
| Transcript ID | LotjaGi6g1v0238100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT5G57270.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|P09628|ACHD_XENLA Acetylcholine receptor subunit delta; TrEMBL-Plants: tr|I3T5Y5|I3T5Y5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0238100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:54789183..54797005) extracted from Lotus japonicus Gifu genome v1.2.
GACCAATCGTTGGCTGCAGTGCATGAGGGAGACTGTTCCTTCGTCTTGGTCTGCCACTGCAAGTTGAGTAGAAGAGTTCC TTTTTCCTCACTTTCTCAGAGATAAAGCAAAACACACACTCAAAACGCTTCGTTTTCTGATCTTTCACCACCCAATTCCA TTCTCTTGTTCTCACAATTCCTTCGATTCACAGGTAAATGCTCTTGTTGTGTCGAGTTTAGCTGCAATTACTCCATGGAA ATTGAAAAAAAAGTATTGGGTATTCACTCTGTTCTAGCTTTTTGAGCTGGGCTACTCCAAAAACGTTGAATTGATTGATT GATTGTGTTTTAGTATTCATTTGTAAGATTGAATGATGAATACTGTTCATGTTTTGTGTTTTTTTTTTTTAATCTCCAAA GATTATATTTTTCTGGTTCCTAGATGATGTTGCTTTTGTGATTTTAGATTTGTAATCATACTATTGCATGTGGGTTATGT GTAAAAATTTGGTCTTTTTTAAATGTTAATGAAGTAGAGAATTCTGGGTTTTGACCTCACAGATCAGTGGTTCCTCCTCA CTCCTTAATAGCTAGTATGTTAGGATTGTATAATGGTCATTTAGATATATTGATTTCTACTATCCCTTGAAGTTTGAAAT TTACAACCCGAATTTTTTCTTTGTACTGCATTATGTGTGGTTGAACATGGAAAAATTGGTTTCTGATGGCTTGTGGAGTT ATGTCTGTCGATTTTATAGTCTCTTCCCTTTTTGTATAGCGAGCACCATGTATGTCTGTCTGGGTCTAGATGTCTGTGTT CAAAACTGAGTTGACTTAAGTGGGTGGCTTGTTAGCTAATGTATCTGCATTTTGTGTTTTGATTCAGATTTTTTAGCATC AATCCGTTGAAGATATCTTGTAAGGCGTTTATCTTGAGTTCTTGTGTGTGCATGGAATGGTGATCCATGAGGAAAGGAGA TTTGTGGACAGCAAAAACCGTGATTTGTTTACATAGATGAAAACAGCAAAGTTTTGGTGCCTAAGCATGGGTGATATGCA GATCTTGCCTGGATCTCGCTACCGTCCTTCCGTGAAGAAGCCAATTTGGATTATTGTCCTGGTTTTGTTTGTGTGCGTGT TTCTCATATGTGCTTATATCTACCCCCTAAGAAGCAGTACAGCTTGTTATGTTTTTCCTTCTAGAGGGTGCAAGGTTATT GCTGATCAGCTTCCACCTCTTCCTGCAAGGGAGTACACCGATGATGAGATTGCATCACATGCTGTTATTAGGGATATTTT AAACACACCACCAGTTTCACAAAATCCAAAAATTGCCTTCATGTTTTTGACGCCTGGTTCTCTACCATTTGAAAAATTGT GGGATAAATTTTTCCAAGTAAGGATTTGTTACCTGTCTATTTGATCTGTTTTTGTATCATATTATTATTTAATTATTTTG ATGCACTGAATTTGAATGGTAAACAGGGGTAGTGGTCTAATGCACCTCTAGCTGAGTAGCCAAATTTGTTAATGATCTTT CTTGCTATAAGGGAATGAGGGGCAAAGGAATGTGGTTTAACTTGATTGAAGGTTAATTTTTTAAATTTATCAATCAACAA CGTTGCATTTGAAAGAAATGGATAATGTGGTATTGCAACTTATTGCAAAATTACAGTCTCCTCCCTGTTAGATATGAGGT GTTCTTGGAAACTGTTGTGACAAAGATGTCACAGCCTTGGGTGCTTAGTTGAAAGTACTGATTCGGTTTAGTATTTGATC CATAAAATGTTAATTTGCAAAATAGACATCATATCTTTTATTCATAAATTGTTGATAATGTACTAGAATCAGACTTGTAC TTATGATTTCGTTGGTTTATTGTCTTTGCTTCTGGATCACATTCATTATGTACTGCGTACTTACCTGGAATAATGTTCTT CTCCTTTTTGGCAGGGTCATGAAGGGAAGTTCTCTGTTTATGTGCACGCATCTAAGACTAAACCAGTTCATGTGAGCCGT TATTTTGTTAATCGGGATATACGCAGCAGCCAGGTGGACAATCTGTCTTTTAACTGTTCAGTTAACTACTATCTGTCATC TGTCGACTCTATCGTGTCATATTATATTCTTCAATGAAAATCATTATTTAAAGGTATATGACTTCTTGGTTTTCTTTAAT ATCCTTTTTATTTGTACCCTTAAATATATGTGACACCTCTTCACCTTTTGCTCAAGTTATGATCAAATTGAACCTCTTGC TTTTGAGGGCCCGAATATAGATATGAAACCAAGACCCCTCTGGACTTATTGTCAACTTAGACATTAACTGATGGTGTAAG AATTTAATAAACATGTCCGGGGATATAATGCATAGTAGGTTCTTCATCGAAATCATCTAGGATTCCAATATTTTACATCG GTAACTTAAAGCTGCAATTTCACACTTCCCTTCTCATTATCCAGAAATGAGATTTATATTATAGTGTATTTTGTTTACTT ATTCACATAACCCTAGGATTCAGCATAGCCTTAGAAGCCAACAATTTCAGTCTAGTTTGACCTGTGTGAACTTATTTATT ATTTATATATCATCATCGTCATCATTGTCGTCATTATTAGTATCCTTGTTATTATGAAAATGCTTCAGCAATACATCCTG TTTTCAATTGTTCTATCCAAGAACATAGAGATGAGGTATGGTACCTAGAGTGAAAGGATCGTGATGTGAGAATCTAGAGA GAGTTTAGAGCATAACCTCTTAGAGAGAGAAAGTAACTGAATTTCCAGCTTGTTATTTCTCAAATGAGCTAAGAGTCCCT TACAATTGATACCCGCCCCCTATTTATAGGCTTGGGGCTGGGCTTAGCGTTCCTGACCACCCTTAGTGGGCCAGTTGGGC CTCCTGGGAGAGGGCCCAACTCTCTGGCTCGCGTGTCGCCCCCAAACAAACGTCCCTGGGCGAGGGCCCTTGGGGTCTCG CCCAGTCCACCAATCATTAATTGGTATATTTTTCAAAGAGTTGCTTAAGGCATTAAGGTCAACTATTGGTCTTGAAAGTA GCAATAGCGGTAGGCCAGTAGCAAGTGTAACTATCAGTTGTTAACTAGTTAGCAGCTCTGACGATAATTAGTTACATGTT GCAGGTGGTATGGGGTAAAATTTCCATGATTGATGCAGAGAGACGACTATTGGCAAATGCCCTACAAGATCCTGATAACC AGCAATTTGTTTTACTTTCTGATAGGTAATTTCCATAGTAATTAGCATTACTTATTGTTTATTTATTTTGGTTTCTGATG TTTTTTTGCGTGGGTTTTGCAGCTGTGTGCCACTCTTTAATTTTGACTATATTTTTCATTATCTGGTACACACAAATATC AGCTTCGTGGACAGGTATGTCATGATTTGCGTAATGTATTCCCATGTGTTTTCCTCCCATAGAGTTGATTGTTCTTCTGG TCTCTACTTTTTGTTATCAATTTGGTGTCCTCAACTAATGCACCCATTTCGTTTTTCATTTTAGTTTTCGGGATCCTGGT CCTCATGGCAATGGCAGGTATTCAGAACATATGTTACCTGAAGTGGAGATTAAGGACTTCAGAAAGGGTGCTCAGGTGAT TTTTTGCTTAAATTGTTTTGTTGCTGCTTGCACGATAATTTGAGTGGAAACTTTACATATTACTATACAGGAATGTGAAA TTTGAACATAGTATTTAGGCTACTTTATTTTACAATTGCCTTTTTCACAGGATACCAATTGGATTAATGGACATGACCAT GATTTACAGCAATAGGCTTTACTAGTGAGTCGTATGCAACACATTGCAGTAGTCAAGTCTTTTATCTTATAGTATAGTGG TCGATAGATTCTCAATAATAGAAGTATCTCTTTGATCTTGCCTGAAATCTCCCACTTCCTTTTATTCCTTTAGATAGTCC AATCGGCATCCTACTGTGGTCCAATGCACCCATTTACAAGCGCATGAATGTTTTTATATAATATTAATTCGTAGCTCATT TAAATATCTCATCCATTTAGATATCTTCGCCTCACTGTTAAATTCTTTATGCAGTGGTTTTCTATGAAGCGGCAGCATGC TGATATAGTTGTGGCTGACCATCTTTATTACTCAAAATTTCAGGATTTCTGTCAGGTGTAGTTTTTAAATCTTATTGCCA TTAAAAGTCCAAAGCAATTTTCTTTTATTGTTAATAGTTTGTAATTTTTCTTGTGTTACCTATTAAGTTTACTTTGAACT GGCACTGTATTCTAACCAAGCAAGTATAGCATGTTGTAATCTTTTAAGTTTTAACATAAAAAATGAAAACATTTTGATCT ATTAAACTTGTAAATGAGTCATATGTTTGACTTTGACAGTAGATGAATCAATGATTTACCAGACTTTTGCTAATCAGAAT TGACTTCCGGATCAATTCTTAAGAAGGAAGATAAGACGACCAAGACAGCAAAAATTGACTTATGAGAGTTAGTGCATCTG CACAGAAATATTGTTTTGATTTGGAATTCTTTGTTTTAGCTTAAGTGTTTTAGCTCAAGTCTCGTGACATCTACTTAAAA AATTAAGCTTTAGACCTACGTTATTAGTTCTTCCGCTTGAAAAAAGTTCTTCTTCCCTCATTCTCTTTTCCGTTGAATAT AATGAATTGGATTCATGGGAGCAACTTCATTTTTTTACTCTGATTACCAATAGCTGGAAAATTCGTTATTTTAGAAAACT ACTAATGCTGACCTACTCCAAGAAAAATCATTATTAGTATGTTACGTCTTATATGCAGAATTTAAGTTATTTGAAAAACT TCCATATCATCCTAGTATTGGATCATATTTATTTTGTTAAAACTTGCATAGCACGTGCTTCTTCTGTTGATATTCAGAAT GTTAGATCCTAAATATGCACCAGCACAGCTATTCAAATTAGAAAAGAAATGTTTTATTTTTGCAGGCAGGATAGAGTTTT TTGTGGAAATTATATTATATGGTTGAATGGCTATGGAAGTGTGATTTAATATTCTCTAAATTCAATTACATTGTTCAATT ATTATTATTAATACCTTTGATATTACAGCCTGGTTTTGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCCACCT TCTTCAAGGTGAGAATGAGAATTTCAATTGTAAAACAAGTCTCTGTTTTGACAGGTTTCAAATTTCAGCTAATTGGCTAA GATTTGTTTTAGATTGTCGATCCTGGTGGAATTGCGAACTGGTCAGTAACTCACGTTGACTGGTCTGAGAGGAAATGGCA TCCAAAATCCTATAAGGCTCAAGATGTTACATATGGGCTTTTAAAGAATATCACGGTATGGTGTTACTATAACTGTAACT TACACAACAAGGCCTATACAATTTTTATTCCTTAAAGAGACATCTTTGGTGCGTGTGTAAAGACTACATGTTGACTGCCA GCATATTTTGGTTCTTGTTTCTGATATTTTATTCTTTGCAGTTAGTTCTTCTAGCCACCAATTTCATTACTTAGTATAGT TGTCATTTTGCGAAACTCTTTAAAGCTTCCTATTCTGCATCATGGGAAAAAACGATGAATATCTTATCTTCTTTTTACTT GTTGAATTGGTTTTACCAAGTTGAGCTGATGTAATGTTCATATTAACTCGCAGTCCATTGATGTAAGTGTGCACGTCACC AGTGAGAAGAAGGTATGCTATCCCATATCTGAGAGCGCTCCTGATTCTGACTTAATGTTTCACTATTAAGCGATAGGCTT AATTGCACATTTGCTCCCTCATCTTTCATCATTGTGCAATTTGCCTCCCCCATGTTTAAAACGAGCGAATTTACTCCCTC ATGTATCAATTTGTGAAAATTGACCCCTTCCGTTAGCCTTCCGTCCAATTTCTAACGGCGATTGCTATTTTCACATCCTC TTTTTACTAACCACACCCCTCAATCAGAAACAAAAATAAAGGAAAAAATAAATGAAATAAAAATTGAATACAAATGGCTT AATTGAACAAGTCTTATCTTACCCAAACCCACCACAAAACCCACCATTGATGAATCAAATCCAAACCACCCAACAACAAT TTTCTCCATGCTTCAAAGCAACAACAATTCCACAAACAGAAAAATTGAATATTTAATTTAACAAATCAACAGCTTCATCA AGAACAACAACAATCATACCCATTGGCCATTTCGCCTATTCTAATGCTAAACCTTCTTCTCCCTCTTCCTCTTCACCATC ATCTCCATCACCTCACAAGTCCCTCTAACTTTCACATGAATTTCATGAAGATTAGCAGGCCCGCACCCTCACTACACGCC CACCCCCAGTCGCGACTCCAAGAGCGTGACAGAAGAAGAGGGGATCCCCGATTTGGAAGACGAGGATCACCACCACCACC CGCATCAGCATCACCGGCAGGAGGAGGAGGAAGTGGTGAAGCAGGGGGATGTCGGTGAATCTCGGCGAGGCGTCGAGGTC GATGGTACTGGAGAGATTGAGGTTGGAGAAGTGGAGGCTAACGATGAAGTGGAGGTGGGGGCGGGTGACGAATTGGTGGT GAGAGCAGTGGAGGTTGTGGAGTGTGGGTTGGGTGGGTTTGAAGCTGATTCAAGTGGCATTGTCTTCTTACTCTCCTTAC AGATCAAATGGAGTTTGAAGCTGATTCAAGTGGTAATGGGTTTGGGGGTGATTTTTGCAGGGCTTCTGGGTTTGGGGAAG AGAGAGATTTTTCTGGGTTGTGTTTGGGTAGGATTTTTCAGTTTATGGTTCCTGGGTTTTTTTCACAAGATGAAGATGAG TATTAGGTGGTAGATGAAGATTCAAATAGAGCCAGGAAGATAAAAATGATGAAGAAGAGGTTGGAATTTTTTTAATTCAC AAAATAATGTTTTAATAAAAAATTACCTTTGTGGCATGATACAACCTCGGTCATCTGTAAAAAATAGAGAGTGTAGGTGT AAATAGGAAATATGGGGTGTAAATAGCAAGCCACGTCAACTCCGTCAAACTTTAACGGTTTACTAACGGAAGGGGTCAAT TTTCACAAATTGATACATGAGGGAGTGAATTCGCTCGTTTTAAACTTGGGGGAGGAAAATTGCACAATGATGAAAGACGA GGGAGCAAATTTGCAATTAAGCCTAAGCGATATGACAAATTATAATGTGTTGCTACAGAATGAAGTGCAAAGATGGCCTT GTTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGGAAATTCACTCCTGGAACACTGGACAATTTGTTGCAG CTTTTTTCAAATTACTCATCATTTTGAGGCAGTACTTTTTTTCGCCAATAATTGTTAGATCAGATGTAGCCTTCAGCCCC CATCTTGGTTTCTCATGGGGAAAAGGGGATTGTAAATAACAGCATTATTGAGGTTTGATCATTTGCCAACACTGTCATTG CAGGTAGGGTGGCCTAATGTACAGATAGGAGGCTTGATTTTATGGCCTTAGGGATTGATAGCTTGACTCCCCCCTTTCCA TTTTGTGGGTTATTGAAGTTTCCTAATTTCTTGACAAATTTTGGGGGAATCATATAAAGCTCATTTCGTGGTTGGTGGTA TTTGTTCATCGTTATGTGCTATGAACAAAGCTTACCAGTATTGCTATCTCATGCAATGCTTAAATTCGTGCATGCTTTTC CTGTTTTTCACGCCAAATCTATTTGTTTTCGGTTTTCTTCTTAAGGTAATCTTGGAAAAGGAGAGTTTAAAATATGTTGT GCCATTAGAAACTACTACCTTAAAGTAAATTTTTGTTGAGACATTGGTGAAAATTGTGTAGAC
CDS sequence (LotjaGi6g1v0238100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGATGCAGAGAGACGACTATTGGCAAATGCCCTACAAGATCCTGATAACCAGCAATTTGTTTTACTTTCTGATAG CTGTGTGCCACTCTTTAATTTTGACTATATTTTTCATTATCTGGTACACACAAATATCAGCTTCGTGGACAGTTTTCGGG ATCCTGGTCCTCATGGCAATGGCAGGTATTCAGAACATATGTTACCTGAAGTGGAGATTAAGGACTTCAGAAAGGGTGCT CAGTGGTTTTCTATGAAGCGGCAGCATGCTGATATAGTTGTGGCTGACCATCTTTATTACTCAAAATTTCAGGATTTCTG TCAGCCTGGTTTTGAAGGGAAAAATTGCATTGCGGATGAGCATTACTTACCCACCTTCTTCAAGATTGTCGATCCTGGTG GAATTGCGAACTGGTCAGTAACTCACGTTGACTGGTCTGAGAGGAAATGGCATCCAAAATCCTATAAGGCTCAAGATGTT ACATATGGGCTTTTAAAGAATATCACGGTATGGTGTTACTATAACTGTAACTTACACAACAAGGCCTATACAATTTTTAT TCCTTAA
Protein sequence (LotjaGi6g1v0238100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIDAERRLLANALQDPDNQQFVLLSDSCVPLFNFDYIFHYLVHTNISFVDSFRDPGPHGNGRYSEHMLPEVEIKDFRKGA QWFSMKRQHADIVVADHLYYSKFQDFCQPGFEGKNCIADEHYLPTFFKIVDPGGIANWSVTHVDWSERKWHPKSYKAQDV TYGLLKNITVWCYYNCNLHNKAYTIFIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 169 | 169 | 4.1E-108 | – | |
| PANTHER | 1 | 169 | 169 | 4.1E-108 | – | |
| Pfam | 1 | 168 | 168 | 2.3E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi6g1v0238100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…