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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0249100 |
| Transcript ID | LotjaGi6g1v0249100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification protein; TAIR: AT5G27690.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|Q84J88|HIP36_ARATH Heavy metal-associated isoprenylated plant protein 36; TrEMBL-Plants: tr|A0A1J7IL84|A0A1J7IL84_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0249100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56123291..56124819) extracted from Lotus japonicus Gifu genome v1.2.
CTCACAACTCACAAGCATCTTCCACTTGCCTCTCTCTAATGGATGCGAAAACTGCTGAAGCTGCTCCAGAGCCTTTGAAG TATCAGGTAGTGAAAAATTTACCATAATTGATTCCTCCAAGTTCAACTCAAGAATCATAACATGCATAAACATATCTTTG TTCTTTCACTCCACTAAAACTCATTCCTCTGTTCTTCTCAGACTTGGTACTTGAAAGTTTCCATCCACTGTGAAGGTTGC AGGAGGAAAGTAAAGAAAGTTCTGAAGAACATTGATGGTACTACTCTCTAAAGCTCTTTTTCCCCCCTAACTCTGTTTTG ACTCTGTTTTTATAGATTATTCTTCCTTTTTTCTATCATGCATGGCTATGTTACACTGTGATCCATTCTCTACATTGAGT ACATTCCATTTTCTTCACAAATTCTCAGCCAGCAAACAGTGTTGTTTTGTTTGCGCTGTAACACAGAAGAGAATGTTACA CGTTTCAGGTGTTTTCACCGCAACAATCGACCTACAGCAGCAGAAAGTAACTGTCACTGGAAGTGTTGGTGTTGAGACTC TTCTCAGGAAGCTGGTCAGAGCTGGAAAACACGCTGAGATTTGGCCGGAGAATCTCGAGGGGAAGGGAAAAAGCTCCAGC AAAGAGAAAAAGGAGAATAAGAGCGGAACAAAAGAACCAAAAGGCTTAGAAAACAAGGGAACTGAAAGTGCTGCAAAGTG TGGCAAAGAAAGCAAGAGCAGCAGCTCAAAAACCGGCGGTGGCTCGCCGGAAAAGCCTCCGGTCTTCAACCAGGATCCGC CGGAGGGTGGTGGCGGAGGGGGTTCTGGTAAGAAGAAGAAAAAGAGAACTCAGAGTGGTGGCAATGGGTTGAGTGCAGGT GCACCATCCAGGAATGCACATGAGCACAGTGGATTCCAGTTCCAGAATCCTGGGCAGGTTGTGGGCCAGGTGAATCTGGA CCCTACACGTCAGCAATCATTCTCATACCCAGAAGCACATTATCCTCCTCCAATGGTTTATTATGTTGCATCTCACAACA GATTTTATCCCATGGGAAGATTTGGTGGTTCTTACTATGTTCCCCCTTCACCCTACATTTCTGCAGGCATAGATCAAGAT GGTGCTTGTCAATTTCAATCACCACCCTTGGTTTCCTTTGAGATATTCAGTGATGAAAATGCTAATGGATGTTCCATTAT GTGAGACATATTGTGAGTTGAATACCAGTTGAGTTAACGTAAAAACACTTTCATCTCAACTCAATCTACCAGTTGAGTTC TGCTGACTTTTTATCTCGAAGTGAATGCTAATTTCAGTTAACACTAGTGTTAATGGGTATCCAAAAGGAATTAGACTGTG AAGAGAATGTTGCAGTGTTATTTATTAGTCTTTTTTTTTTTTGATAATTTATTAGTCTTTTTTTAATGGTGCTAGGTAGT TTTGCAATGATAAGTTTGTAAGAGAGGATATATCAGAACATATGCTCATTTGCAAAATTAGTTCAATTATGATATATCAA AATGGTGAA
CDS sequence (LotjaGi6g1v0249100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCGAAAACTGCTGAAGCTGCTCCAGAGCCTTTGAAGTATCAGACTTGGTACTTGAAAGTTTCCATCCACTGTGA AGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGAAGAACATTGATGGTGTTTTCACCGCAACAATCGACCTACAGCAGCAGA AAGTAACTGTCACTGGAAGTGTTGGTGTTGAGACTCTTCTCAGGAAGCTGGTCAGAGCTGGAAAACACGCTGAGATTTGG CCGGAGAATCTCGAGGGGAAGGGAAAAAGCTCCAGCAAAGAGAAAAAGGAGAATAAGAGCGGAACAAAAGAACCAAAAGG CTTAGAAAACAAGGGAACTGAAAGTGCTGCAAAGTGTGGCAAAGAAAGCAAGAGCAGCAGCTCAAAAACCGGCGGTGGCT CGCCGGAAAAGCCTCCGGTCTTCAACCAGGATCCGCCGGAGGGTGGTGGCGGAGGGGGTTCTGGTAAGAAGAAGAAAAAG AGAACTCAGAGTGGTGGCAATGGGTTGAGTGCAGGTGCACCATCCAGGAATGCACATGAGCACAGTGGATTCCAGTTCCA GAATCCTGGGCAGGTTGTGGGCCAGGTGAATCTGGACCCTACACGTCAGCAATCATTCTCATACCCAGAAGCACATTATC CTCCTCCAATGGTTTATTATGTTGCATCTCACAACAGATTTTATCCCATGGGAAGATTTGGTGGTTCTTACTATGTTCCC CCTTCACCCTACATTTCTGCAGGCATAGATCAAGATGGTGCTTGTCAATTTCAATCACCACCCTTGGTTTCCTTTGAGAT ATTCAGTGATGAAAATGCTAATGGATGTTCCATTATGTGA
Protein sequence (LotjaGi6g1v0249100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAKTAEAAPEPLKYQTWYLKVSIHCEGCRRKVKKVLKNIDGVFTATIDLQQQKVTVTGSVGVETLLRKLVRAGKHAEIW PENLEGKGKSSSKEKKENKSGTKEPKGLENKGTESAAKCGKESKSSSSKTGGGSPEKPPVFNQDPPEGGGGGGSGKKKKK RTQSGGNGLSAGAPSRNAHEHSGFQFQNPGQVVGQVNLDPTRQQSFSYPEAHYPPPMVYYVASHNRFYPMGRFGGSYYVP PSPYISAGIDQDGACQFQSPPLVSFEIFSDENANGCSIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 279 | 278 | 2.0E-91 | – | |
| PANTHER | 2 | 279 | 278 | 2.0E-91 | – | |
| SUPERFAMILY | 14 | 81 | 68 | 1.02E-16 | ||
| Gene3D | 14 | 79 | 66 | 5.6E-19 | – | |
| CDD | 20 | 78 | 59 | 3.68608E-14 | ||
| Pfam | 22 | 73 | 52 | 2.7E-13 | ||
| ProSiteProfiles | 23 | 79 | 57 | 11.815 | ||
| MobiDBLite | 81 | 118 | 38 | - | – | |
| MobiDBLite | 81 | 191 | 111 | - | – | |
| MobiDBLite | 119 | 133 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi6g1v0249100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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