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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0254200 |
| Transcript ID | LotjaGi6g1v0254200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major allergen Mal d 1; TAIR: AT1G24020.1 MLP-like protein 423; Swiss-Prot: sp|O24248|PRU1_PRUAV Major allergen Pru av 1; TrEMBL-Plants: tr|I3SQH0|I3SQH0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0254200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56613799..56617298) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGCTCAGGAGATCATCTAATATTACAGTTTCACTTTTGGTCATTGTATTGATAGCCATGCCTAGTTTATTTGACCAC CAAAGACTACATATGGCATGTTTGGCGGTGGAAAGAGTAAGATTTTCCAGGCTCAAATCTTACCTTATTTTTTTTGGTGC TTTAAATCTTACCTTATGCATCTCCCTTTTTCTTCCTACATGATTCTTGACAATAAATAAAGAATAAAAATTCGCAAGAC TTCTTTTTGTGTATGCAATTCTAGGTGGCATATTAAAGTTGATTTTTTTATTCTTTATTTCTTATGCCTCAAGTTTTATT TTAAATTCCCACAAACATAAATATGGACTCATCATTTATTTTATAAATGGAGATAAGTTACACACTAATTTGGGGCCATA TATAAGTGTTAGAATTATGAGTTTACTCTCTAAGAAACTTCAATCACTGATTAAAAAATCATTCGTCAATAAAGCAAATA CATATACATAACAAATAAATTTGTTAAAATATATTCCCATTTTCAAATCTTTTACTTTTAAATTTCCCTAATCTAAAGAA CTCGCCTTCAAAAAGTATCATAATACAACCTTCTAAGCGTTCATCTAACATTTGGTGCATTCCTATTCACAATACCCCAT AATCATAAAGATCAAAAGAAAAAGAACTTTTCTTTCTAAAAGTTGTTCTTTTTATTATGCATGGTTTGATCTTTTTGTAG TTGCTGAGATAATGCTATGGCAAGACAAAAAGTTATCAGCTGCGGTTCTCCTAGCTATGTGCTGCTATTGAGTCATTGGA TCGATGTACCATGTGTATCCTATTTTAAATAATGCAAAAAAATTTGGTTAGACTTTGGATATGTATAATTTTAATTCAGG TCAAGGCGTCAAGCACATAATGCCCACGCCCCCCTTAAACTACTCACCTATCTGGACTCTCCCCAACTGCTGAATAAGAC AGCTATTTATTTAGTAGCAGTCTGTGAACAGGTATTGTTTTTTTCAACTTCATAATGCAGAAAACTAGGAGAATATTGTG TAAAAAACTCATTCACCCTTAAAAAAAATTGTATACTTATTTGTGTATGAATATTTACTCATGAAAAACATACCGAAAAA GTTTGATTCACACTTTATTTTTCACTCACATCTAGAGGGAGGTGGGAATAGATAGAAATAAAAAATATGATGAATAATTG ATAGGAAAAAGAAAAAAGTGAAGAGAAAGCGTGGAAATAAAATACAAGAGACAGTAGGGTGTAAATCAAAACCCAATAGG TATGTGTTCATGTGTGCGTGAGAGTTCATTATTTGCTCAAACAATTCTACATCAGCATACATTAACTAAACAAAACTGCA ATAAACTATACACCAAATTTTTTATATGAAATTTGATTATTCAATAAATAAAGCATTTAACAACTTGACAATTCATCATC GAGAAGGATCTTGTTCCTTCTAAAGTCGAAGCATTTGATTTGACTGTACTTCATTTATTAATATGATATTTCGGAATTGC GTAAGTGAAGCTCCTACTCCTAGCAACCTGTGACGCCTATATAAAATGCCATATCCACAATCCAAAAATTCACACTGTGC AAAGCAACATACTCACCATATATCAGATTCCTTATCAATATTTTGTCTCGTGTGAGAAAATCATGGGTGTTATCACTACT GGAAGTGAGCGTGTTTCGGCTGTTGCTCCTGCAAGACTATACAAAGCCATCGTCCTGGATTTTAGCAATGTCTTCCCAAA AGCCATACCAAATGTTGAGAGTGTTGAAATTATTGAAGGAGATGGAGGGCCAGGGTCCATTAAGAAGTTCAGTTTAACTG ATGGTAAAACAACTATTTAACTACACGTTCATACATGTGTTTGTACACACTAAAGCTTTCACTCATTCATGGTGCATATG TTTGAGTTTGTGCCAGTAGAATGCAGTTATTCATTTTGTATATGTATGATATGATTAGGTTTGGGATCCGTGAAGCACAA GGTAGATATGGTTGACCCAGAAAACTACGTGTACCACTATACCATAATTGAAGGCAAAGCTTTATTAGACCAATTGGAGA AGATCTCTTATGAGTACAAATCTATGGCAAGTCCTGATGGAGGCTCCATTATTAAGTGCACAACCAAATACTATACCAAA GGAGATGCGCAGCTTCCAGATGAGTTTCTGAAGGCTATCAAGGAAATCTCTGATAGGTCCACTAAGGCTGTTGAGGATTA TCTTTTGGCTAATCCTGATTACAACTAAAACAAACAACTTATCACAGATCCGTTGTTAATTATGAGGAAGAGTCCTTCTT GTCGTCTCTGTTGTCATGTTTTTATGAACATTTGGATTTGATTTGAATTTTGAGATATAGGTGTGGGATTATGGCTTGCA TACACTTACTATGTAAAAAGATGAAATTAGTAATATTTCTCTTATATAGTTCTCTGCATCCCCTTTACTGTGTACAGTTG ACAAGGAGCTCAAACTATGCAACAATGTAACACATTCAGAGAAAGAAAAGGGAGAAAATAATGAACTTTTATTGGAAATT TCGTGTAAACACACTTGTTATCTCCTTACTAGTGTTTCCCCATGTTTTGAGTTAATATGGTTTACATATCCTGTTTTGTA GCTTGTTTGCCCTGTTTTTCTCTGCTCTTCTGGGAGCAACTTTCAACGGTTGTTCCATTATAAGTTGTATCACATCCATC TAGAACAGAAGATCAAAGTTCTGTGGACGGCGATTAATATTAGTGGACTCACAGTGCAGTCTTGGGTTGATTTGATTTGA GTGTAATAAAAGTGTAACTAAACTACATAAATCATCAACTTACCTGTTACTCTTACTTCAGACAGCTAGTTTTAGGAAGA CTTCAAAAAGAGTCTTCAATGCAACTTACCCACAGCACTTGAGAGATGGTAAAATAAAAGTATAAACATTCCTATCAATC CCAATTTCTAAGTAAGGATATAAGTTAAAATAATCGTGAACTATTGCAACCAAATTATAACATGTTTATGAAGCTAGCTT GTATAACAAAATTATCGTTAAAAATGATCTACCATTAATTATATAAACGAGACAAACTCAAAAGTACATAACACCAGTTA GAGGCAAATCTTGAACCGAATACCCTACAAAATGCGATGATAAGTAATTTCTGCCGTGGCTATTTTTTTCTTTCATCAGG GGCAAAAAGCATAGTGTGTAAAGCATATTACTTACATCCATACATCCAGTCAGCAGAATTCGCTAAAAGACAAAATGTGG ATCAATATTCTTGCAGAGCGTACAGCTTGACTTCAGCAGCCAATGGGGCCACGTTAGTATCTCTAAATTTTTCTCTTCAA AACACCGAAGAGCTAGCAACTCTTAGGCAGCACCCACTGGAACATTGTCCGATACAATCTGCAAGAGAACCATCGTTTCA GAAAGGCACCCAAGACTAAGCAAATCAACAACACAAGACAGCATTTTCTTTTTTAGAGTA
CDS sequence (LotjaGi6g1v0254200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTTATCACTACTGGAAGTGAGCGTGTTTCGGCTGTTGCTCCTGCAAGACTATACAAAGCCATCGTCCTGGATTT TAGCAATGTCTTCCCAAAAGCCATACCAAATGTTGAGAGTGTTGAAATTATTGAAGGAGATGGAGGGCCAGGGTCCATTA AGAAGTTCAGTTTAACTGATGGTTTGGGATCCGTGAAGCACAAGGTAGATATGGTTGACCCAGAAAACTACGTGTACCAC TATACCATAATTGAAGGCAAAGCTTTATTAGACCAATTGGAGAAGATCTCTTATGAGTACAAATCTATGGCAAGTCCTGA TGGAGGCTCCATTATTAAGTGCACAACCAAATACTATACCAAAGGAGATGCGCAGCTTCCAGATGAGTTTCTGAAGGCTA TCAAGGAAATCTCTGATAGGTCCACTAAGGCTGTTGAGGATTATCTTTTGGCTAATCCTGATTACAACTAA
Protein sequence (LotjaGi6g1v0254200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVITTGSERVSAVAPARLYKAIVLDFSNVFPKAIPNVESVEIIEGDGGPGSIKKFSLTDGLGSVKHKVDMVDPENYVYH YTIIEGKALLDQLEKISYEYKSMASPDGGSIIKCTTKYYTKGDAQLPDEFLKAIKEISDRSTKAVEDYLLANPDYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 155 | 155 | 1.6E-70 | – | |
| PANTHER | 1 | 155 | 155 | 1.6E-70 | – | |
| Gene3D | 1 | 156 | 156 | 4.6E-52 | ||
| PRINTS | 3 | 23 | 21 | 6.5E-32 | ||
| SUPERFAMILY | 3 | 156 | 154 | 5.82E-42 | – | |
| SMART | 6 | 152 | 147 | 0.0058 | ||
| CDD | 9 | 149 | 141 | 8.59249E-50 | – | |
| Pfam | 12 | 152 | 141 | 1.4E-23 | ||
| PRINTS | 26 | 36 | 11 | 6.5E-32 | ||
| PRINTS | 63 | 82 | 20 | 6.5E-32 | ||
| PRINTS | 82 | 95 | 14 | 6.5E-32 | ||
| ProSitePatterns | 86 | 118 | 33 | - | ||
| PRINTS | 107 | 123 | 17 | 6.5E-32 | ||
| PRINTS | 141 | 151 | 11 | 6.5E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein phosphatase inhibitor activity | Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from phosphorylated proteins. | ||
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Biological process | Abscisic acid-activated signaling pathway | A series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription. | ||
| Molecular function | Abscisic acid binding | Interacting selectively and non-covalently with abscisic acid, plant hormones that regulate aspects of plant growth. | ||
| Molecular function | Signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
Expression pattern of LotjaGi6g1v0254200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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