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LotjaGi6g1v0258500.2

Overview

Field Value
Gene ID LotjaGi6g1v0258500
Transcript ID LotjaGi6g1v0258500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Pre-mRNA polyadenylation factor Fip1; TAIR: AT5G58040.1 FIP1 -like protein; Swiss-Prot: sp|F4KDH9|FIPS5_ARATH FIP1; TrEMBL-Plants: tr|A0A0R0I3B3|A0A0R0I3B3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:57113424..57120751) extracted from Lotus japonicus Gifu genome v1.2.

GAGGGTTTTAGATATGCAGGGGTTTTAGGTGCTCTAGCACCGCCACTACTCTCAGTCTCTGTTGAAAATGGAAGAAGAAG AAGCACCATTTCACGGTGGCGACGATGATGATTTCGGCCAACTCTACCTTGAAGAACCACTCCCTCAACAACAACAACGA GAAGCAGAAGAAGAAGAAGCCGATGCTAACAGTAACCACGCCAATGAAAATGTTGCCATCGAAAGCAGCGACGACGACGA CGATGATGATTTGAACATCGTCTTAAACGACGACGGATTCGACATTGACGACCGCGATGCTTCCACATTTGTTCATAATC CCCCGGTGGGTACCTCTACCTCTCTTCTCCACTGTTTCTGTTGTCATTCATTTGGAACTGATTGGGAATTTTGATTTGTT GTTGTAGCATTTGAGGACTCAAGGTCAAGGAGGATCGTTGTTTGCGAATAATCAGATGAAGAAGTCGAATCCCTCCTCCA TGGCAATGCCTTCCTCCTTCAATAACATGACATCAAGTCATTTGTATGCTGCTGCACCCAATCCAATGGTGTCGCATCAG GGTGGATACTCATGGTTTCTTCCTTCGTACTGGTCAGTATATACAGCAATTCACGCGGGCCTCCGTAAATTTGGTTTTGT TTTATAAACTGAAGTGGACTTGTATATTGGGTCTGTTTGGATACCATCTTATAACAGCTTATTGGAGCTTATCTACTTAA AAAAGTACTAAATAAGTTCCAATAAGTGCTTTTTTGTTTGCATTCAAACGGGCTGATAGTGGGAGAGTCCATGTGATAAC AATCCCACAGAATCCCTCACATTGAAATTTGCAATCATTATGGTATTATGGGATGCATTATGTAATGTTTTAACTATCTG ATTCCCTTGCAGGAGTGCATTTAATGTAAATGTTGATGCTTTAAAGGAGAAGCCATGGGTGTTTTCTGGAGTTCACAAAA CTGATTACTTCAATTATGGTTTTGATGAGACCACTTGGAAGCTATACTGTACTTCATTGGTGGGTACAATTATCTGCTTC AGAAAATATCTCACTTTGTAGCTTTTATGTGATGCCTGATGCCTCTATCTTGTCTCTTTCGTTTGATTTGCGCTTAATTT GCCCATTTTCTAGCTAGCAGTGCTGGAATTTTTGTTATTGTTTCTGGCATTACCCACTTGGTTACCTGTGATCATATAAT TGACATTTGTTTCTAATTAAAAATTGTGTAAAAATTAACTGGTAAGGACCTTATGCTTAAACTGTATGCAGGAGCAACAT TGGCGAACATCCACACAACAGGAGCAACATTGGCGAGCATCCACGCAACAGGAGCAACATTGGCGAGCATCCACACAAAC TGGTATTTCTGTTGACGGGTCTGCGAAATTGAATAAGGTATTTGTTCAGCACCATATTTGAACAAGAACAATTAACTACC TAGGTTATGATTTGTGTTATTATGGTGACTGGACAACTTCAGGAAGCTATGAAAGATAAATATTGTTCAAGTCTTGTCAG GGAGCGTACCTTACATCAGATTGTGAATTTATATGCTGATGTTAAGCAGTTGGCCCTTACTAGAATAATAGGGGTATTCA TGTGTCAGGATTCCTGTTTTTAACACTCTTACTTGGATGGGGCGATGGACTCGTATAAATTGTAATAAACTTGTGCTTGA CCTAGGTTATTAGCATGAATAGCAGCGTTAGTCTAACGTTTTGTAACACAGCTCAATATCTTACACTTTACACGTTCAGA ATATTCAGAGCTCCTTCTTTTTCTTTTCCCCTTTCCACCTTTTCCCTATATTTTCAACGCCTACTATTATTTTACCACTT TTGATGTTGAGTTTCTTCAAGCTATCCTAGCATGCTGGCTGTTGATTCTATCTAATATTTGATAATTCAGCCAAAAGGAA AAGCAATACGAGTTGAGGAAAGCATGGGTGAACGCCAACCATCCATACACCTAAGGCGTCCAGTCAGCAGGGATTCTGAT GTTGTTATAGAGGTATGCACTCACTCTAGGTTTCCATGATTTTTATGCTGAAGCTGCCAATGTCTTTGGAGTAAATATTC ATGGTTTGGTGCAGATCAAGGTGCTTGAGTCCTCTGATGATCATTCTGGTTCTGGCAACAGCACCGTAGTGGATGCATCA TTAGAAGTGGAATCTATTGTAGGCAAGAACAAGAATATTCTCAATTATTTCACTGAATGTGATGATGTGCTGTCTGAAGA TCAGTTGGAAGACGTTAAAAAATCAGATGAAATTTCTCTTCAGCAGGAAAGGTAAGATACTGGATCTGACTGATCCCTTC CTATATATAATGCACTTTTCTTGTCAGGATTTGTGTATATAGACACATTTTAACTTCATTGAGCCCCTTCTTCTGTATCT CTGTATGGTCCCTGCTAGAAGTACTGGTAACTTTTCAAATTCAAGATGAAAATATAAGGTAAAATTGGCATGGACATGAC AATAGTACTTTACTGCTGCTACTTTTCATGCTGAAAATATACTAGCTTACATTCTGTGGATAATCATTTCTTGTATATCT TATTACATATTTACATATCATCTTTTTATTGTATATGACTTCCAGTTTTTCCCGCTTCTATTGACACATTAGTTTATTGT TAAAATTCTTTATGTTTTCTTAAATTCCTTTATTGGTTTAGTAAATTGGACTTTTTGTTATGAACTTCAAAACTTATGCT GACTCTGCTTTTCACAGAACTAGCCTGATTCCTGGTGTAAATGAAGATGGGCATCAGGATCAAGCTGACCATCTTGCCGA AGATACTGCAGAAGTTTCAGGGAAAGAAATAAAAGCAGAGGAGAATGGTGGCATGGACGCATGCAGTCCTTATTCATGCT GGAATGAACCAGAGTTGTCACTTGGTGATCATGAGCATAGCCTGACTTCCTATACTGATAGTGATTCCGAGGGAACACAA AACAGTGTACATGTTGATGATGAGAAAAGTCTTGTCCCTGAAAGAAGGCAATCAATCAATTCCATCACTGATTTGAAGGG CAAGTCTTTGCCACTTTATTGTGAGAACTCCAAGAATAACAGTTTCAGCAGAAAAGCAGTAAATGTAGCTTACAATTCAA GAACTAGAGTTCCACATAGAAAGGAATGGAGGCATCGAAGTGGTAGGCATGAGGGTGGTTTGAATCTGAATAAGCACAAT GAAAATGATAATCATGTTTCCTCTATCCTCATGTCTGGTGCAAGGGATCTGTCTCAGTTGGGTAGTCAATTTGTTGATTA TGGTAGTAGACATAGAGAGCAACTACAAGGTTTTGGCAGTCATAAAAGAAGAGATGTTTCATATACTAGGGAAACTAAAC AAACCTGCTATTATGGGGGTGAAAAGGCTGTTGATGACCTGGTTCAAAGAGACCACTCTAAATATTCATATGAAGAAGGT CGAGTCCGGGATAAAACAAACCGATATTACAGAAAAAATTGGGGTGTCAGGAATTATTTTTCTAAACCAGGTTCTCGGAT GGCACGTTACGAGGACAGGGAGAGAGATCATTATCATGATGGTTGGGGGTATGCTGCTGATGACCTGAACCCTGACTCTT GTAGGGAGTCAATGCTGCTTCTTCCAAAACATTCATCCTTTCCTCACCAGGAGAGGGACACTCAAAGGGAAAGAATAAAT GACAAGTCCTACTTTAGAGACAGAAACTACAATGACGATTTTGATGAATGTGAGATTGAATTTTCAAACAAAAGCTATAG AATGTCTCCTTATTCTGCTGAGATAGAAATGGAATATTTAAATAATAAACGCGATGAGCAGTTTCTACATACTGATAGAG ATTGGAGAGGATCTGTCCGAAGGGTAAAACATCGTGGCGAGCCTCCTCTTGTTTTGGATAACCTGTGGTCTGGGAAAATG GATGAAAAATGTCAGGCATATACACATCATCAGAACTCAAATTTTAGGTATCGTAGACAATCTACACACTCAGTGAGAAA TGTTTGTGGAGCAAGAGTGAAAGAAAATTTTGAGTATCATACCCATGCTGCTGAAGATGAAGATTTCATGCTTTATCCTG TAGAAGAGTATCAGTGTTATAGGTCCTCATCTAAGTTCCAGAACTGCACTGAGGAGGAACTTGTTTTTAGGCATCATGAA ACTCATGCAACATCTCTGCAAGATGACATGCAAATTGATGATATAAAATTGCGGCAGCATCAGCTAAATATGCCAAGGAG AAATAACAATGGTTTTAAAAGCTCTAAGGTCATATGCAGAAGTAATCTTAGGCAAGCAGCGCTGAGATGCAGGAAATCAG TTGATTTGGTTAACGGGGAAGGAAAGGTAAAGATAGGGAGAATATGGTTAAGAGCCTGTACTACTGTGTTTTATACATAT GAGCCATTCAACAACTGCTGGGCTTTATTTCTTTTTGATAGCTGTTATCTCATTCAAAATCCACTGTATTACCTCACTCT CCCAATTAATTACTTCGTTTATTTCTTTATTTTAATGGTTTTGAAGTTTGAACAATTCCATATCTTAGTGATGTGCTTGA GTTTCAGCATCGCTATCAAGCTATGTTCTGGAGTCTCAGGTCAAGCACATGAAGTAAATCTGTGAAGTTCCTAGAAACCT TTGTAAATCAATCTCATATTTCCTTTATGCAACTAAAATGAGATATATATAACCTGAAGACACTAATGTTGTGTCAAATA TGCTTGTCTGTTTGTCATAATGTTTAGTAATATTTTTATGACTCAGTAATATTGTTGTCTTATAGATGTTTTCCAACTCC ACCTGTAGTAGGATATCACGGCTTGTTTGTTTCCTTGTTGCTTCTAGACCAGACTGCAAAATTAGTGTATTAGCTGTGAT TTTTTTTTTTTGATAGGCAAATGTTAGTTGTTAATTGTTAGTAAATTAGTTCATTCGCCAGGGTTTGAACCCTGACCCTT CACCTGCAAATCCCTTCATTTCCCTTAGCTCACCAAGTGAGCTACCCTTCCTTACCTTATATTAGCTGTGATGATTTGAC ATAATATGGTCATAGCTTGTGTTGATTAATCTTGTTACCATCAACATGGCTTGAGATCATTCTTTTGCTTGAGATCTCTT GGCAGACCTGATCCTGGGTCATATCCATAGATCTTTTGGCTTGAGATAATTCATTTTCTCATGGTGTATGGTTTTCTGTA TTATGTTTAAATTTCAATTAATTGAAGCTTCCACATTGGAATGTTGGACATTGTAACATTGTATATTTCTGACATGTGTG TGTGTGTGTGTGTTTTTTATAAATTCTCAGTCAGTTAGATATAATATCTTGCAAACTAGGGAAGTCTGTCACTTAATCAT GCAAACTAACTAGATCATATACATATATCATACATGAGCAATAGCTTAGTGATCTTGTGTCACAATTTTGTATATATTAC TAATATATTATAATTTACCCTCAGACGTGATGGGCACACTTTGTTGTTTATGCTCTTAATTACCTTAATCCTTTCAGATT GGTAAGAGAATCGAATGAGACAATCACTCTTCTTCCTACTTGTCAAGTTTGAATTGTGCACATCGTTCTATTAATGCATA GATCTGCTAAATAGTTGTAATATTGTATCACTTTCAAATTCAATTGTCTGCATAAGTTTCTAGTAGATTTTTTTTTATCC AGCAAGTGGACTCACATGTTTGGTCCAGTTTTTGGACCTTATAATAGTTGTAAATTAGTTCTTTGAGTGATAAGGATGGG GCCTTCTAAAGCATGTATACCTTTCCCTACTTAAACCGCCATCTGCCTTTGCAAGCACCAGTTTCTTGCTTGTGTGATTT ACTGATGTGGAATGTAGTTGTAGTTCTTTAAAATGAGTTCCAAAGTAGATGATTGGCAGCATGAAAGTACAAGTTATTGT TTGATGATTTTGTGTTGAAAAAGACATTAGCCACTCTATACCCCATTTCAATTTGTTATAGCCTGATGTTCATGCTTACA TTGTCTTGGTCTGATATAAATTTAATAGTCTCAGTGTTATTTATCCTTAGTTCTTGTATTCTCATAATTAGGTAGTCCAG AATCATTTACTTGTTTGAAGATGTTGTGCTCTGTGTTGCATTGGAGTTAGCAGTGGGATAACTTCAATGTATTAAATGGT ACAATTTTTTCATATTGACTTGTGGTAAAAAGGTGGCTAATGCACTTATCTATCTTGCTGTCACTTTTGTTACTGCTTAG CACTCTGTCACCTTCTGTTTAAATTTGACACAGTATCTCAGCACCTCATTATTTATTTGATGCCCTATACTCGTGTCTAA CATCCACGTCTTTTATTTGTTAGATGTGTTGATATTCTCCTGATGTTTGGCTTGCTTTTAAATTTGTGACATGTCCTCAT GATTCTGCAGTCTCAGGCAAGAAGTTCCGGAATCTTTTGCAGTGGTAGGCTTCAATTTGTCGATGAAGGGATTGCTAAGA AGCCAAGAGCTTCAGTGGGTCTTGCTGAATCTCGTAAAAAGGCCATTACATTCGAAACCTCAAAGTACGAGAGCAACCTT GAAAATAAGAAATGTCTTCAAAACCTTCAAGATAAAGGGCAGAAAGAAAGCTTGGATATTGAGGAAGGTCAGGTTGTACC AGAAGAACTATTCACAGTGTCTTCTGTATCCAGAAAAGATGTTTCTGAAGGTGCAGCAAAGTCACAGCATGAGAATAATT CTGACCAGTTTATAGGTGGTTATGACAATCAAAGGATTCTTGATTCATTAGCTAAGATGGAGAAACGTGGGGAGCGCTTC AAGCAGCCCATTACACTGAAAACAGAAGCAGAAGAAGAGGGTTTGAAGCTCAACAATGACTCAGTAGATGCCGGTGAAGC GAAGCAACATAGACCAGCTCGAAAGAGGCGCTGGGTTGGTAGCTAGTTTTTTATTTATTTTTCAAGGCTTGAGAACCTGC TGATTCAATAAAGGGGAGACAGCTACTATGAGGAAACTTGGTTAGTCCACAAAGTTTTTTGGCAGAAATTCTTTATCCAT GGAATAGTTGAGATCAGATGTTAATTTTCTTTGACTTGAATATAGCCTGATCGGCCTAATTAACAGTATTGGCACTTTTG AAAGGTCTATATTGTGAAGAACCCTGACATTCGTAATGCATTCATTTGGATCTCCCTGTTGTTTCCGTTGTAGGGGCCAG GGGGAGCATCATCAGTATTTTTCAACTAAGACACTTAAGTGTGTCAAGAGTTGATTTTGAGGATTTTGTGAGAAATGGTA TGTGCGAATTCTTAGATAAGAGTCATGAAAGAATCTCAAGATAAAGAG 

CDS sequence (LotjaGi6g1v0258500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGAAGAAGAAGCACCATTTCACGGTGGCGACGATGATGATTTCGGCCAACTCTACCTTGAAGAACCACTCCCTCA ACAACAACAACGAGAAGCAGAAGAAGAAGAAGCCGATGCTAACAGTAACCACGCCAATGAAAATGTTGCCATCGAAAGCA GCGACGACGACGACGATGATGATTTGAACATCGTCTTAAACGACGACGGATTCGACATTGACGACCGCGATGCTTCCACA TTTGTTCATAATCCCCCGCATTTGAGGACTCAAGGTCAAGGAGGATCGTTGTTTGCGAATAATCAGATGAAGAAGTCGAA TCCCTCCTCCATGGCAATGCCTTCCTCCTTCAATAACATGACATCAAGTCATTTGTATGCTGCTGCACCCAATCCAATGG TGTCGCATCAGGGTGGATACTCATGGTTTCTTCCTTCGTACTGGAGTGCATTTAATGTAAATGTTGATGCTTTAAAGGAG AAGCCATGGGTGTTTTCTGGAGTTCACAAAACTGATTACTTCAATTATGGTTTTGATGAGACCACTTGGAAGCTATACTG TACTTCATTGGAGCAACATTGGCGAACATCCACACAACAGGAGCAACATTGGCGAGCATCCACGCAACAGGAGCAACATT GGCGAGCATCCACACAAACTGGTATTTCTGTTGACGGGTCTGCGAAATTGAATAAGCCAAAAGGAAAAGCAATACGAGTT GAGGAAAGCATGGGTGAACGCCAACCATCCATACACCTAAGGCGTCCAGTCAGCAGGGATTCTGATGTTGTTATAGAGAT CAAGGTGCTTGAGTCCTCTGATGATCATTCTGGTTCTGGCAACAGCACCGTAGTGGATGCATCATTAGAAGTGGAATCTA TTGTAGGCAAGAACAAGAATATTCTCAATTATTTCACTGAATGTGATGATGTGCTGTCTGAAGATCAGTTGGAAGACGTT AAAAAATCAGATGAAATTTCTCTTCAGCAGGAAAGAACTAGCCTGATTCCTGGTGTAAATGAAGATGGGCATCAGGATCA AGCTGACCATCTTGCCGAAGATACTGCAGAAGTTTCAGGGAAAGAAATAAAAGCAGAGGAGAATGGTGGCATGGACGCAT GCAGTCCTTATTCATGCTGGAATGAACCAGAGTTGTCACTTGGTGATCATGAGCATAGCCTGACTTCCTATACTGATAGT GATTCCGAGGGAACACAAAACAGTGTACATGTTGATGATGAGAAAAGTCTTGTCCCTGAAAGAAGGCAATCAATCAATTC CATCACTGATTTGAAGGGCAAGTCTTTGCCACTTTATTGTGAGAACTCCAAGAATAACAGTTTCAGCAGAAAAGCAGTAA ATGTAGCTTACAATTCAAGAACTAGAGTTCCACATAGAAAGGAATGGAGGCATCGAAGTGGTAGGCATGAGGGTGGTTTG AATCTGAATAAGCACAATGAAAATGATAATCATGTTTCCTCTATCCTCATGTCTGGTGCAAGGGATCTGTCTCAGTTGGG TAGTCAATTTGTTGATTATGGTAGTAGACATAGAGAGCAACTACAAGGTTTTGGCAGTCATAAAAGAAGAGATGTTTCAT ATACTAGGGAAACTAAACAAACCTGCTATTATGGGGGTGAAAAGGCTGTTGATGACCTGGTTCAAAGAGACCACTCTAAA TATTCATATGAAGAAGGTCGAGTCCGGGATAAAACAAACCGATATTACAGAAAAAATTGGGGTGTCAGGAATTATTTTTC TAAACCAGGTTCTCGGATGGCACGTTACGAGGACAGGGAGAGAGATCATTATCATGATGGTTGGGGGTATGCTGCTGATG ACCTGAACCCTGACTCTTGTAGGGAGTCAATGCTGCTTCTTCCAAAACATTCATCCTTTCCTCACCAGGAGAGGGACACT CAAAGGGAAAGAATAAATGACAAGTCCTACTTTAGAGACAGAAACTACAATGACGATTTTGATGAATGTGAGATTGAATT TTCAAACAAAAGCTATAGAATGTCTCCTTATTCTGCTGAGATAGAAATGGAATATTTAAATAATAAACGCGATGAGCAGT TTCTACATACTGATAGAGATTGGAGAGGATCTGTCCGAAGGGTAAAACATCGTGGCGAGCCTCCTCTTGTTTTGGATAAC CTGTGGTCTGGGAAAATGGATGAAAAATGTCAGGCATATACACATCATCAGAACTCAAATTTTAGGTATCGTAGACAATC TACACACTCAGTGAGAAATGTTTGTGGAGCAAGAGTGAAAGAAAATTTTGAGTATCATACCCATGCTGCTGAAGATGAAG ATTTCATGCTTTATCCTGTAGAAGAGTATCAGTGTTATAGGTCCTCATCTAAGTTCCAGAACTGCACTGAGGAGGAACTT GTTTTTAGGCATCATGAAACTCATGCAACATCTCTGCAAGATGACATGCAAATTGATGATATAAAATTGCGGCAGCATCA GCTAAATATGCCAAGGAGAAATAACAATGGTTTTAAAAGCTCTAAGGTCATATGCAGAAGTAATCTTAGGCAAGCAGCGC TGAGATGCAGGAAATCAGTTGATTTGGTTAACGGGGAAGGAAAGGTAAAGATAGGGAGAATATGGTTAAGAGCCTGTACT ACTGTGTTTTATACATATGAGCCATTCAACAACTGCTGGGCTTTATTTCTTTTTGATAGCTGTTATCTCATTCAAAATCC ACTGTATTACCTCACTCTCCCAATTAATTACTTCGTTTATTTCTTTATTTTAATGGTTTTGAAGTTTGAACAATTCCATA TCTTAGTGATGTGCTTGAGTTTCAGCATCGCTATCAAGCTATGTTCTGGAGTCTCAGGTCAAGCACATGAAGTAAATCTG TGA 

Protein sequence (LotjaGi6g1v0258500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEEEEAPFHGGDDDDFGQLYLEEPLPQQQQREAEEEEADANSNHANENVAIESSDDDDDDDLNIVLNDDGFDIDDRDAST FVHNPPHLRTQGQGGSLFANNQMKKSNPSSMAMPSSFNNMTSSHLYAAAPNPMVSHQGGYSWFLPSYWSAFNVNVDALKE KPWVFSGVHKTDYFNYGFDETTWKLYCTSLEQHWRTSTQQEQHWRASTQQEQHWRASTQTGISVDGSAKLNKPKGKAIRV EESMGERQPSIHLRRPVSRDSDVVIEIKVLESSDDHSGSGNSTVVDASLEVESIVGKNKNILNYFTECDDVLSEDQLEDV KKSDEISLQQERTSLIPGVNEDGHQDQADHLAEDTAEVSGKEIKAEENGGMDACSPYSCWNEPELSLGDHEHSLTSYTDS DSEGTQNSVHVDDEKSLVPERRQSINSITDLKGKSLPLYCENSKNNSFSRKAVNVAYNSRTRVPHRKEWRHRSGRHEGGL NLNKHNENDNHVSSILMSGARDLSQLGSQFVDYGSRHREQLQGFGSHKRRDVSYTRETKQTCYYGGEKAVDDLVQRDHSK YSYEEGRVRDKTNRYYRKNWGVRNYFSKPGSRMARYEDRERDHYHDGWGYAADDLNPDSCRESMLLLPKHSSFPHQERDT QRERINDKSYFRDRNYNDDFDECEIEFSNKSYRMSPYSAEIEMEYLNNKRDEQFLHTDRDWRGSVRRVKHRGEPPLVLDN LWSGKMDEKCQAYTHHQNSNFRYRRQSTHSVRNVCGARVKENFEYHTHAAEDEDFMLYPVEEYQCYRSSSKFQNCTEEEL VFRHHETHATSLQDDMQIDDIKLRQHQLNMPRRNNNGFKSSKVICRSNLRQAALRCRKSVDLVNGEGKVKIGRIWLRACT TVFYTYEPFNNCWALFLFDSCYLIQNPLYYLTLPINYFVYFFILMVLKFEQFHILVMCLSFSIAIKLCSGVSGQAHEVNL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 63 63 -
Phobius 1 907 907 -
PANTHER 12 868 857 5.8E-188
PANTHER 12 868 857 5.8E-188
MobiDBLite 28 42 15 -
Pfam 153 192 40 5.6E-15
MobiDBLite 390 416 27 -
MobiDBLite 463 487 25 -
TMHMM 908 927 20 -
Phobius 908 927 20 -
Phobius 928 933 6 -
TMHMM 934 956 23 -
Phobius 934 955 22 -
Phobius 956 960 5 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0258500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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