Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0259100 |
| Transcript ID | LotjaGi6g1v0259100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Huntingtin-interacting K-like protein; TAIR: AT3G06610.1 DNA-binding enhancer protein-like protein; Swiss-Prot: sp|Q9NX55|HYPK_HUMAN Huntingtin-interacting protein K; TrEMBL-Plants: tr|A2Q2W3|A2Q2W3_MEDTR Huntingtin-interacting K-like protein; Found in the gene: LotjaGi6g1v0259100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57203172..57209562) extracted from Lotus japonicus Gifu genome v1.2.
CCATAACATCCCCTTAGATTACCATGATAAAAATTTAGAATGTAAATTAAGCCTATAAAATAATATATATCCTATTAAAT AAAAATCGATTATGTTTTGAGTTTTATAACACAGAGAGAGGTAGAAGCAAGGTTTCTTCTGGGGCTATAGCAGCAGCAGC AGCAGCAGCTAGGGCATCATCTTGTGAAGAAGAAGAATCATGGAGGGTGCAGAAGAAGGAGTGGAGATGATGCTGGATTC CAAGGACATGCAGCAGCAGAGCAAAGCCTTCGACAAGCTCACTGACCGCGTCGAGGATCGCCAGCTCGATTCCACTCGCG TCCAAGAGGTACTACCCGCTTTCATTCAATCCAGCAATACCCTTTTCCCATTCACCTCGCTAAATCGATTCCCTTTTGTT GTTTATGCGTGTAATGGCCTAATGGGTATGCGGTGATTTGACAGGCCATGGCTTCCATTGCTGCATCTGCTGAAGCTGAT TGGAACGCCATGCGAATGAGGTAAACAAACAATACTGTGTTTTTCAATGAGAGATGATCGATTCGAGTATCGAAATTGCT ATTGCTGATTGTTTTCAATTTGTTGTTTGCTGGGAAACCTGTGTTATTGAGCTGAATGGAAAGGGAATGTTGCTAAGGGG AATGAAATGAATTGTAGATAGAAATACCAAATTCTTGTTCATACTCCAATTGGGGCAGGGGAAAGGATATAGACTTCTAT TTCTGTAGTTTAAAAATAGCCATTTAGGATTCTATTCGTTTCGCGAACAAGATGATGGAGTTTCTTTCTGCTTGCTTATT AAGCTTCTAAGTCAAGGGCAAGGTAGTTTTGTTCTGTTATTTAACTACCCAGTCCATGCTCATTAGTACACTATCTTAAC AGCTCTCATAAGTCGTAAACACATTGTTGGAATACGCTACGCATATGCATTTAGCTGAGATCTCCTTGGATATCTTCAGT TAACTGTAGGAATGTAGAAGAATAGATTGAATAGTTAATTATATTGCAGTAATTAGTGCTGGTTATCCAATTTTTACTAA CCTCATATTTTTCTAATTAAATAAAGGAAAGAGATAGCTAAGGATAATATAATCAAGGAGCAAATTATGACTTAAATATT CAATTATTGAGATTTAGCCAGTTCCCCACCCAGAAAAAGAAAATAAAAACATTTTCTATGTGTAACTTACCCCCTCAGCC ATTGAAATATGTTAGTTCAAGTTTTTAACAACACTATGGAGATGGGGGTAGTAAATAGCACATTTGGATGGATTTTGGGG TAAATGCTAAATAAAATTTCGGGGTAACTTACACATGGGGTAGACTTGAAGAAGTGCCATGGGGCTTCTTAGCACAGTAG GGTACTAGCGTTATTCATTTGGTTATAAGTGACGTCAAAACACCAGTAAGAATATTGAAGACACCTACTTTAACTTAAAC CAACATTTTTAAATCTTGATCGTAGACTTGTATCCTTAGCCCTCGTTCACATTCTCCTCCCCCCAACTCTAGTGTGGAAA GTAACCAAAAAACAGTGTCACTCTTCAATTTGAGTATTACTCTAGAAAATTCCTTATTTAAGAATTCGTTTGTTCAACAG GGATGGATACCTGTAGCTCTTTACTAATGCTTAATATCTAAGCTTTCGTTCACGACTTCATCATGCAGCTGCACCTTTTT CTATTCTTGCATGTAAATTGAATATATCGGGTTGTTTTACTAATGAAATATAAAGTACTTGTGTAGTTCTTAAATCATAA TTTAAACATGAAATAAACGTGGCTATGTAAAATAAAAACAAGTTACATATAAAATTCATCACGCCATTTCCCCTCTTGTC TCACCTGCATTAATGATCTGTTTTCCTTTTATTTCTAACCCGTGATATGCATTTTGATCTAATCACAGGGAGAAAGAATT AGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATCGCAAATGAACTTGAGGTAACTTCTTCAACAGATTGTTTCA CAATCTATATAGAAGTGTATATTTCAATTAATTAATCTGTCTTTCTGATTGTTTTCAACAGTTGGACAAAAAGGTGGCTG AAAGAACCTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCCATCAGGCACTTGCTTCGCTAGAGGGGTAGGAATGAACAA GGATTAGTGTTTCAGAAGATTATACGTGTCAGGTTTTTTTGTTTTGCAAAACTTGAACCTCAAATGTATACTATGGACCT AATCACTTAATTCATTCCGAAATATGAACTGTGTTGTTAACATTGAAGGAGCCCCCGCCCCCCCCCCCCCCTCTAAATTT TTCTGAGCCGTTTGCCTAAAAGAGATACCAATTATCTAATGTGGAGCTAAGTACTTCATGAGGACCTCCTTGTTTTTCAT CTATGTATGCTTGCTTGTTGAACATACAGTTTGTGATCCTCAAGCTCAGCTTGGAATCATTTCCACTCAAATGAAAAGCC CCACACTTCACTTGCTTTCTTAAATTGAAATTTTGTGTTTGAATGTTTGTGCATATAGCATATTCTGTTGTTTTACATCC TAATGGATAAAGTTCTGCCTATATTATAGATTTCTGTCTGTTTGTTGAAAGTGTCATTGATGAGAATGAAGTGTCCATAT TCTTGCTAACTTATGCGTATTTTAGAAGACTACTATAAAGGTTGTGTTTGTATTTCTCTCTACATTCATTCTAAGGCAGC TTGAATATGTTTTTGGTCAATCCATGTCTCTTGTGTCACTGGAGTGAATCTACTTTTGGCCGACTTAAATGTAAATACAA ACACACATATAATCATTCAACCCCCTACCCCCACGCTGTGGTGCCTTTTCTTTCTTTGGCCATACACCATATTCATGTAT GCAGAGTTAAAAATTTGTTATCGTGTTTCCCTTTGTCGCCATTCAGTAAGTGCAGAGTTTACTTCCACTCAATGAATGAT AAGATCTTAAACCGTTGTCCTTCTTTGGGGCGTTGCAAATACAGCTGAGGCTAGTGCATCATGGCAGATTGGGCATATAT CATTTTCCTGTAACAATATTTCATTCTTCAAATTTTACACTTCATTTATTTTTTTATTTCTCCCTTTAACATAACATTTT TTTCTCTTCCATTTTGATATATCTGCCTCAGGAGTGGTAAAAATCCATTTTAGGTAACTACCATGGCCGGAATGTTCTAC AGCCGTATTTATTTCGAACCTTTAGAAGTGTGTTTGAGATATTCTACAATATAGAGTAATATCACAGAAAATGGCATCAA TGTCTAAATTGCGGTTTAGTGATATACAATGACTTACATTTTTTTTCCGGTGATATACTCCCTCCGTTCCTAAATATAAG ATCTAGTTTCAAAATTTTGTAGTTCCTAAATATAAGACCTAGTTACAATAATCTAACAAAAGGTTTTGTACTCTTCCATT TTTACCCTCCACATTAATTATATGTTTTCAATTCCAAAGTTACCACCTACCATTAATTACTACTAATCCAACTAAATATG ACTTTTGGAATATCAATGGTGAGTGCATAACAAAGGTTAAATAAGGAAGAATATATGCTTTTTTAAAAAATCAATACAAT AATTAGTCACATTAAGTGCTTCCTTAATAAGCGCAATTTTTTGGAATAAGTCTTATATTTAGGAACGGTGGGAGTACAAT GACTTACATTTTTTTCCGGTGTAAACCAAGGTATCTCTACAATTGATGTGAGATTAATTCATCGCTTCACTATCAGCGCA CTGAGCGGTAGGAAATTGGCCAATCTACTGTCAGCGCACTCAGCTGTAGGAAGCAGTCCAATGAGTTTTTTCCATGCCTT ACATTGGGGATTTGGGGTTTTGAAATTTCACCCATCCCAATGTCCAATAACTAACTACTCAAATTTCGCCAAAATTTATT CATTGACCACAGATGAAGGGAACAAGGGATGAGACCCTAAATTATTGGCTCAGGCAACAATCCATTTTCTTGTATCGCAA TAAATGGATCAGGCAATAAGCCTACTTGAAGTTATTTTAGAATGTGGATAATTAATAATGATAATGGATCTGAAAATAAA ATTATAGCTCATGGGAGGTTCTCAACTCAAATAAGTATTTTTAACTTAAAAATACCTTCCTAAGATTATAGGTCCTAATG AAAATTTCCAATAAAAGAGGTTCTGAAAAAATGGAGCACAGACATTGATTTCAACTTAGCAAGCTATTATTAAGACTAAA TACTTACAACATAATTTCAACTTTACTTTTTCTGAAAGTACTTTATAACAAGTTTATCTAACTATCTCAAACTATATGAA CTTTCAAAGCTCTTTTGTAGCAAAATGAAAGCTCTTCTGCCCCCCCCCCCCCTTCCTACCTGCTGTACAGGCCATCTTCC ATATAAAATTACAACAGAGCTATTGAGGAAACATAAAATCAAAATGACAAATAGTTTGGAAACCCTTTTCCTACTTGTTT TCATTCTCTACCTCCAGCCCCTTTTTTTCTGTCATTCTCTTGTATGATGTATGATACCTGAGAAGACGTTGATGAACAAG AATTCAACTGGTAATGTCGCGAGGAATCCAGCACCAGCCTGATAGTACCAACTCATTTACTCATCAGGCGGGTTTTGTAA ATGTATGCAAAAGAATCATTAAGCATCAAGCTTTGAGTGACCAAAAGAAACAATCTAAGAGAGTGGCTATGAATCCTTTT GGGCGCCTTCCCCACCATTAGATCTGGCTGCCTGGAACTGAATGGCGTACCGTCTCTGCAGTTCTCTAAGCCTATCTAAC AGTTCCCGGAAACTTGGTCGGCAAGCTGGATCGCTGGTAGTGTTGGACAAAGTTGTAAATTTAGCATAAAATGATTAGTA ATTGCACAAACTTGGCTTCAGATAGCTTAGTAAGACTGATAACCAGAATGTTTGATATGAAAAAGTAAGCAAAGATGGTT TAGATAAGTAAGTATCCATGACAAGAAATAGGAAATGTTGTTACTTTGAAAATCCATGTTAAGCTAAGATATCCAAAAAC TATACATGCTATGATCTGTTAACTACTTAACTATGTTGGTATGAGTAAAAACCCAAGTACCCAAGTTATGATAACAACTT CCAAGGCTTTTGACCAAATAGGGTAATATTGTAAACTAATTATTATTTTTTAGAGGGAAAAATAGAATTCTTATTCATCA ATCAATCATATTACAGGTGAGTTCCCCACCCTATATAACCACTCTAACTAACTCCTTGAAGTCTCTCACGTGATCACACA AGCAAGGTTTCCAACTAACTAACTGACTGCAAACAGCTAGCTAACCATATTACCTGATATACTAACTATGTGTATCACAC ACCAAGACAATCAATGGTGAGAACAGGCTTGATTGTGAATGAAGTTTGCAAGACCTTTCATGTATATCCATCAGTAAATC AAAACCATCTGGATTAAATTAACAAATACCTCCACTTCCTTATTGTAAACTAATTATTAACAATTAACAGTGTACTTTAA AAACAATATAGCAGTGTGGGGAGGGTTCCCAATAAGATAGTTGACCTGCCACATCACTAGTAGGCAGTAGCACTTATCTG CATGACTCTTTTATAAATGCCATGAGAACTGTGATGGTGATAAAAAAAACAAAGAAAAATGGATATTGTGTCATGAGAAA GCATTACATTGAGTGAAATTTATTCATATGACCCACTTTCTGTATTAAAATAAATAAATAAATAAGGGGGGAAAAACTTA GACAAACTCCACTAATGTAAAATGCTGTCATGGGATTTTTTTAAGAAGCTTATTAACTTAGCTTCTTAAAAAAGAGCAGC ATTGACAAACTCCACTTATAAGAGTACAGTGTACTTTTTGTCCCATTGCAATAAGTCCCTATTTTAATGTTATTCATAAG TGATGTACATCTCATTAGTGACATTATTTTATTCAATAAGATAAACATATAAAAAAGAATTACAAAAAAAATTCCTTTTT GTGTCACACACCTAGAAGGCTAGACCTAGTGTTTGACAATTTTGACAAAAAGTGTTAAAACAACCTAAAATATTTTTTAT TTTATAAATGTTCAAGAGTTGGTTAAGTAGACTTCAAGTGCTTTTAAATCCTTAACACGAGCAAGTAAACACGCATACAT ACATATATATATTATGATATATATATATATATATATAGATTTTGTATATTTAAATGAAATATTTTAAAAAATTATTATAT TAATATTTATTTGTCTTGGGTACACTGCATGAGTAGAACTGTCCATGTAGGCGTAGGTCATTTTAGGTAGCTAAAGTGGA CAAGCACCAATCATGTGGCAATGATGATAGTTCTATCCCTAAAATACCTAAGTCTAGGTTTACAAAGGTAT
CDS sequence (LotjaGi6g1v0259100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGGTGCAGAAGAAGGAGTGGAGATGATGCTGGATTCCAAGGACATGCAGCAGCAGAGCAAAGCCTTCGACAAGCT CACTGACCGCGTCGAGGATCGCCAGCTCGATTCCACTCGCGTCCAAGAGGCCATGGCTTCCATTGCTGCATCTGCTGAAG CTGATTGGAACGCCATGCGAATGAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCAGATGTTGATATAATCGCA AATGAACTTGAGTTGGACAAAAAGGTGGCTGAAAGAACCTTGCGTGAGCATAAAGGTGATGCAGTTGCTGCCATCAGGCA CTTGCTTCGCTAG
Protein sequence (LotjaGi6g1v0259100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGAEEGVEMMLDSKDMQQQSKAFDKLTDRVEDRQLDSTRVQEAMASIAASAEADWNAMRMREKELAAVKINAADVDIIA NELELDKKVAERTLREHKGDAVAAIRHLLR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 5 | 109 | 105 | 1.1E-40 | – | |
| CDD | 69 | 109 | 41 | 6.22399E-14 | ||
| Coils | 80 | 100 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0259100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…