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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0260300 |
| Transcript ID | LotjaGi6g1v0260300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase inhibitor; TAIR: AT1G47960.2 cell wall / vacuolar inhibitor of fructosidase 1; Swiss-Prot: sp|F4HWQ8|CVIF1_ARATH Cell wall / vacuolar inhibitor of fructosidase 1; TrEMBL-Plants: tr|A2Q682|A2Q682_MEDTR Pectinesterase inhibitor; Found in the gene: LotjaGi6g1v0260300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57319327..57320284) extracted from Lotus japonicus Gifu genome v1.2.
CTTTAACCTTCTTATCCTCCAAATATTTGTGTTCTTCAGACAATTATAAGATAAGTATAATTAGTTTTTAAATGAAGATT TCAAGTGTTTCAACCATCATTCTCCTTCACCTGATTACCCTATCATTCATCCTCTTCATACCACCAACCCAATGCACTAT ACCAAAATCCAATTTAGTGAACCAAATATGTCAAAAAACCCCTGATTACCACCTATGCGTTTCAACTTTAAATTCACAAC AACTTACATCCAATGCTAACATTGCTGGAAGTGCACGCTTAATCCTTAAAATTTTCGCAGCCAAAGCTTCAGCCATATTG GACAAAATTCACAAATTTAATGCGCAAACATATCACCCACAATTGAAATCACGTTTGGACACTTGCATTAATTCTTACAC GAAGATAGCAAAGGAGCTTCTGCCAAAGGCAATGAATTGTTTGGACAGAGGTGACTATAATGGCGTGAAAGAAAGTGCAG TTGTTGCTGGAAACCTGGCTGCTTCGTGTGCAAGGGAATGTGATAGTACCACAGGTGCTCTTTTGCAAATGGGCGAGAGT AATCAATATGTGCAAAATATGTGCGCCATTACCGTGTCAATTGTTACCAAATTGACTCAACCATATCACACCTAGGTTCT AACAATTTTTTGTTGCGTACTTAATTGACGCAATTTCAAACCACAAAAAGATTTTTCAAGAATGCGGCTTCTAGAACATA ACTATCGATTTAGGGATTCAAACAACTATTTTGACCGTTGCGACATACATTCTAATCATTTTGGGTTATCTTATTTTATG TAATTAATCTAAACAATTTATAAAGTTTATAATGCGAAGTGGTAGCTAGATAGATTATTCAAATTGTTGTATATCTTCAT CAGTAATGAAAAATAAAACCTCAACTTAAATGTGTCTTTGATTTAATTCCCAGAACACAAACTGAATTTGTGACTGAG
CDS sequence (LotjaGi6g1v0260300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGATTTCAAGTGTTTCAACCATCATTCTCCTTCACCTGATTACCCTATCATTCATCCTCTTCATACCACCAACCCA ATGCACTATACCAAAATCCAATTTAGTGAACCAAATATGTCAAAAAACCCCTGATTACCACCTATGCGTTTCAACTTTAA ATTCACAACAACTTACATCCAATGCTAACATTGCTGGAAGTGCACGCTTAATCCTTAAAATTTTCGCAGCCAAAGCTTCA GCCATATTGGACAAAATTCACAAATTTAATGCGCAAACATATCACCCACAATTGAAATCACGTTTGGACACTTGCATTAA TTCTTACACGAAGATAGCAAAGGAGCTTCTGCCAAAGGCAATGAATTGTTTGGACAGAGGTGACTATAATGGCGTGAAAG AAAGTGCAGTTGTTGCTGGAAACCTGGCTGCTTCGTGTGCAAGGGAATGTGATAGTACCACAGGTGCTCTTTTGCAAATG GGCGAGAGTAATCAATATGTGCAAAATATGTGCGCCATTACCGTGTCAATTGTTACCAAATTGACTCAACCATATCACAC CTAG
Protein sequence (LotjaGi6g1v0260300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKISSVSTIILLHLITLSFILFIPPTQCTIPKSNLVNQICQKTPDYHLCVSTLNSQQLTSNANIAGSARLILKIFAAKAS AILDKIHKFNAQTYHPQLKSRLDTCINSYTKIAKELLPKAMNCLDRGDYNGVKESAVVAGNLAASCARECDSTTGALLQM GESNQYVQNMCAITVSIVTKLTQPYHT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| PANTHER | 4 | 184 | 181 | 6.5E-36 | – | |
| PANTHER | 4 | 184 | 181 | 6.5E-36 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| TIGRFAM | 7 | 182 | 176 | 7.4E-25 | ||
| Phobius | 8 | 23 | 16 | - | – | |
| Phobius | 24 | 28 | 5 | - | – | |
| Phobius | 29 | 187 | 159 | - | – | |
| SMART | 31 | 177 | 147 | 9.1E-4 | ||
| Gene3D | 31 | 182 | 152 | 3.6E-31 | ||
| CDD | 33 | 181 | 149 | 1.319E-37 | ||
| Pfam | 34 | 176 | 143 | 1.0E-12 | ||
| SUPERFAMILY | 34 | 181 | 148 | 8.76E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Biological process | Negative regulation of catalytic activity | Any process that stops or reduces the activity of an enzyme. |
Expression pattern of LotjaGi6g1v0260300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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