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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0264600 |
| Transcript ID | LotjaGi6g1v0264600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY family transcription factor; TAIR: AT1G30650.1 WRKY DNA-binding protein 14; Swiss-Prot: sp|Q9SA80|WRK14_ARATH Probable WRKY transcription factor 14; TrEMBL-Plants: tr|V7BN46|V7BN46_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0264600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57824043..57828641) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCCTGATGTAGCGTATGGAATAGAGCTGTTTTGTGTGAAAAGTCAGCGTCTCTCTCTTTATCTTTCTATTTGTATAA ACCCATGAATGAATGATCTCTCTCTTTTGTTTGTTATAGAGAAAGGAACAATCAGTTTCAACCTCCAAAAACCTGTTCCT TAACTTGCTTTTTCTTGCTTCTTAATAGCCAAAAAGCCCATCTCCCCAGGAGAGAAAACTTTCTGTTCTCAATGATCTCT AATCAATTCACACACCAACAGAAATATTGCATGTCTCTCATCACACGTCCTTTTATTACTTCTCTTCCAAATTAGAGACC TTATATATCTACATCTTTGCTCCAAAACATGTCACACAACAACAACACCAACAACAACAACCCTTTGAAGAAGAAGCTAA TTTTGTTTCACTAAGGAAAAGCATGTGCAGCATCTTTGTCTCAACCATGGACAACAATTACCAATTTGGAGATTTAACTG ACATACTCAGGGCTAGTGGTGGAACTTCATCATCACCTGAACCACCTGCACCACCACAACCACCACATCATCATCAAAAT CATTGGCATCAGCATCAGAATCAGCATCAGCTTCAGCATCAGTTCTCTTCTGATCCTATGATTTTCAACAATTTTGGTGA TCCATTCTCAACCTTCAGAGATCCTCTTCTTCTGCAAGACCTTGATATTCCTTCAGTTTCTTCCTACTTCAATACTTCTA CAACAGACTCTGGGGGTTTGGAACAAGCAGTTGTTGCAGCTAGTGGTTTTGGTGGTGTTATTAGTGGTAATAGTGCTACT AATAATACAAATGTTTCTGCTTCTTCTGTTTTTGCTCACAAGGTGGTTGAAGATAATCATGACATGATGAGGAGGCCTTG TAAGAACATATTCTCAAACATGATTCAGATCTCTCCCAATTGCAATGCAAAGTTACCTGGCAGCTATGATTCTTCTTCAA CTTCTTCCCCAGCCCCAAGGCCAATTAAACCTTCTGCTGTGATTTCACCAAACATCAATATTAATGCTGCTAACAACAAC ACTGAAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTCAAAAGAAGGTAACAAATATATTATTATTAATTAACATC TGAATTCAATGGAGAGAATCAAATTTATGCTTATTGTTCTTGATTTCATGGAATCATCACATGCTTCTTTTCTTTCTTTT TTCTTTTCATGAACATTAAATTTTATGAAATTATTTGTCTTGAGTTTTTTTACTGTAGAAGAAGTAGGGTTTGGCATGAG TTAGGTAGTTCTTTCCTTTTCTTGTGCTTTCCAAATCTGTTCAGTAGTTGACTAATTAATAAGTTTAGATCATGAGATGA GAAACAGTTTCATTTGTGAAGACTAAACATGGTTTTCCTCTGAGGCTTTTTGTAGGCTTTAATTCACATGAAAAGTAGAG TTAGCTTTGTGTCACAAACAATAACAGTCACAGACTGAGCTTTCATTTCAAGCAAAACTTATCTTAAAACTACTTTTCTT CTGTAAACACCTGAAAATTCCTATTCCTTTCATCATCAACACACAAAATCATAGATTGCCAAAAAAGAAAAAGTACCAAT TTCAGTGAAGCCAATTCAAATAGATTACTTATACAGCCTGATCTAATAGTTCTTTTCAGATGTATGTGTTGTATTTCTCT TTTGTCATATTCTCATTTCTTAATTACATCAAAGTTAAGAGTGAAGTGAATAATTGCAGGAAGAACCAGGCGAAAAAGGT GGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCTTCAGATTTGTGGGCTTGGAGAA AATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGTAACAAGTTAGTTTAGCCTTGACTTAGGTACGATTATTC TTGATAAGATAACATATTTTATCAATATTAAAATCTGGTGCAACTGTGTAAGCCAAAAAAAATATATAAAACTTTCATGC TGACCTCTACCTAAATCAATTTCTTGCACTGCACAATTGTGTTTCTTCCTTATATCTTGACCGTTGAATATTCATACTTG TCACACTTTGAGGAGGATTAGAAAAACAAGTAGGCTAAAAGTTTTCCCGTTCATAAAGCTATCTCTAACCATTTTTTAAT TTTATTAGAAGCAAGTCAGCAATTATTCTTTGGTAACCTTTTGATAGCATATTTTTCGAAATTCAGTAGTTACTGAGCTT TTCTTCAGAATTGATTATGGTTTCAGAATCAATTACAGAAAAATTTCTAAACATGCAGTGACTTGAGATGTTTGCCATTC GAGTGTTATGGTGTTTCTTATTCTTCTTTATTTTCATCTTTTTCCATCAGGGGTTATTATAGATGCAGTAGCTCAAAGGG TTGTTCTGCAAGGAAGCAAGTTGAGAGGAGCAGGACAGACCCAAACATGTTGGTTATTACTTACACTTCAGAGCACAACC ATCCATGGCCAACTCAAAGGAATGCCCTGGCTGGTTCAACAAGATCCCAACCATCCAAGAGCAACAATGCTGCTTCCAAG AGCTCAGAAATCTTTGACTCCCAAAAGGGAACATTAACAAAACCAAAGGAAGAGCATGAGCAAGAGAGCAACAGTGAAGG CAATAACTCCCCTAGTGTTGCAGCTGGTAACTCATCAAACAGTGTGAAGGAAGAGATGGAAGACATGGAGATGAAGCAAC TTGAAAATATGGAAGATGGAGAATTCAGTGATGGAATTGGAATCCCTTACAAGCCATCTATGATTGGTAGCAACAACCAA CAATCTGAGGATTTCTTTGCAGAATTGGGGGAAATTGAAGCTGATCCATTAAACCTTTTGTTCACACAAGGCTTTGGTCA TGCACCTGATGAGCATCAAAGAGAATCCACCAAGGCCATAGACCCATTCCATATCTTTGATTGGTCCAACACCACCAACA CCAACTCATTTGATGAACCTAATAAGAGAAGGTTATAGCAAGACCTACTAGTGCATGTTTGGAAATCTATATATCCTTAC ACTTTGAAGGCAAAATTAATCCTATGGAGAAGCTTCTATGAGTAAGACATGAGTTTCTGAAAGAAGATAAACTGATCCAA ACATGCGACTAGTAGAAAATTAGAGGAAAGACCTTAATCAACCAATTTAATTTTATTTGGTGGTGCAAATTCTATTTTCT CATCTGATTTGATGAAACATGTCATGTGGGGCACAGGTTTGAGAGATTTCCACACTTTTTTCTACTTATTACTACTACCT TTTTTTTCTTGTTATTTACCAGAACAGTTAGCATTTAGCAGAGTGAAAAAAAGAAAAGAAAAAAGAGAGTGCTGGTTAAT TGGAAGCAAAGGCAAGTGAGTCCCACATTCGTTTTGGAATATTGGTGGATGGGACAGAAAGCTGAGGAACAGAAGGTTGC AACAGTTGAAACCAAGTACATTTTCACTATATACATCACATGCACTCCAAATCGAAAGCTCAGTGAGTAGATTGATGAAT GATCAAAGGATGGGACTATACTAGCTAGCCATTTCAAGTGGGGAAAATTATTTAAAGCTATAGCCTCTATCTCCCTTCTT TGCTCGTGTGAGTGATGTGGGGCAATTATTGCTATTGCTATTATTTTCCATCATCATCATGATCATCATGAGTAGTGAGA GATCAAAAGTGAATGAAGATCATGGGTTCTGAGATTATAAGCTTGTTGCTGAGATGAAAAGAAGACAAAAGGGTGAAAAT TATAGTATAATATAAAGCTTGACTTTTCATATCAAGTCACCTCTAGGGATGTGCGACATGATGAGAGGGAAAAGAAGACA AAAGAAAATGCATGCTTTGGTTCCTCGGCTTTCTGTTTTTAATTATCCACCGACTCATTGTTTTGATTTTGAATTCATGA GATTACTTTATTTAATTATGTTTCTTATTACACTGGTTATATCTATTGCATTTTGATTTGATTGTTTGTGTGTAGGTAGT TTCTGTTTAGGTGATAAATTCCAGCAAAACGAGGTTGGCATTTAATCATTTGGCATGTGCATGCCCTCCTATTTGTGCAT GTATCTTCATAATTCATGATCAGTTCAAATATTATAATAAGCATGGAGAACGCAAACATATATAATATTCAACCATATGT AATTACCGAAAAAGCCAAGCTAGGTTCATTGAGAACTTGGCCAAGGATGTAAATTAAATGTAGCATGTTAATATATAACA TGTTAATTTAATATATCTAGGTTGTTAGGGTTCTTGAGGATTCTAATTAACATGCACAATTAGAATAGGTAGTCTTATAT ATCATACACCATAGTTTATCAGTTAGAAACTACTTACTTGCTATTTACTAGCAAATTAGCTAGAATTTAATATTTATTTA ATTTTGTAGCTAATGAAAGGTTATTTTCACAACTAATCGGTGGTAATACCATGGTCCATAATAGAGCAATAAAAAAGCAT TTTATCAATCCGTTAACCATATTTTTAGGATGTGCTATAGAAAGGGTATTCCTCAACTAACGGTTCAAGACTATGTTATG CGGTAGTGAAACTAGAAGTCCCACATAGGTGAGTTCAAG
CDS sequence (LotjaGi6g1v0264600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCAGCATCTTTGTCTCAACCATGGACAACAATTACCAATTTGGAGATTTAACTGACATACTCAGGGCTAGTGGTGG AACTTCATCATCACCTGAACCACCTGCACCACCACAACCACCACATCATCATCAAAATCATTGGCATCAGCATCAGAATC AGCATCAGCTTCAGCATCAGTTCTCTTCTGATCCTATGATTTTCAACAATTTTGGTGATCCATTCTCAACCTTCAGAGAT CCTCTTCTTCTGCAAGACCTTGATATTCCTTCAGTTTCTTCCTACTTCAATACTTCTACAACAGACTCTGGGGGTTTGGA ACAAGCAGTTGTTGCAGCTAGTGGTTTTGGTGGTGTTATTAGTGGTAATAGTGCTACTAATAATACAAATGTTTCTGCTT CTTCTGTTTTTGCTCACAAGGTGGTTGAAGATAATCATGACATGATGAGGAGGCCTTGTAAGAACATATTCTCAAACATG ATTCAGATCTCTCCCAATTGCAATGCAAAGTTACCTGGCAGCTATGATTCTTCTTCAACTTCTTCCCCAGCCCCAAGGCC AATTAAACCTTCTGCTGTGATTTCACCAAACATCAATATTAATGCTGCTAACAACAACACTGAAGGAGTGCAGATCTCAT CTCCACGGAATCCGGGTCTCAAAAGAAGGAAGAACCAGGCGAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAAC AGCAGACAAACTGGAGAGGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACC TTATCCCAGGGGTTATTATAGATGCAGTAGCTCAAAGGGTTGTTCTGCAAGGAAGCAAGTTGAGAGGAGCAGGACAGACC CAAACATGTTGGTTATTACTTACACTTCAGAGCACAACCATCCATGGCCAACTCAAAGGAATGCCCTGGCTGGTTCAACA AGATCCCAACCATCCAAGAGCAACAATGCTGCTTCCAAGAGCTCAGAAATCTTTGACTCCCAAAAGGGAACATTAACAAA ACCAAAGGAAGAGCATGAGCAAGAGAGCAACAGTGAAGGCAATAACTCCCCTAGTGTTGCAGCTGGTAACTCATCAAACA GTGTGAAGGAAGAGATGGAAGACATGGAGATGAAGCAACTTGAAAATATGGAAGATGGAGAATTCAGTGATGGAATTGGA ATCCCTTACAAGCCATCTATGATTGGTAGCAACAACCAACAATCTGAGGATTTCTTTGCAGAATTGGGGGAAATTGAAGC TGATCCATTAAACCTTTTGTTCACACAAGGCTTTGGTCATGCACCTGATGAGCATCAAAGAGAATCCACCAAGGCCATAG ACCCATTCCATATCTTTGATTGGTCCAACACCACCAACACCAACTCATTTGATGAACCTAATAAGAGAAGGTTATAG
Protein sequence (LotjaGi6g1v0264600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCSIFVSTMDNNYQFGDLTDILRASGGTSSSPEPPAPPQPPHHHQNHWHQHQNQHQLQHQFSSDPMIFNNFGDPFSTFRD PLLLQDLDIPSVSSYFNTSTTDSGGLEQAVVAASGFGGVISGNSATNNTNVSASSVFAHKVVEDNHDMMRRPCKNIFSNM IQISPNCNAKLPGSYDSSSTSSPAPRPIKPSAVISPNININAANNNTEGVQISSPRNPGLKRRKNQAKKVVCIPAPAAAN SRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGST RSQPSKSNNAASKSSEIFDSQKGTLTKPKEEHEQESNSEGNNSPSVAAGNSSNSVKEEMEDMEMKQLENMEDGEFSDGIG IPYKPSMIGSNNQQSEDFFAELGEIEADPLNLLFTQGFGHAPDEHQRESTKAIDPFHIFDWSNTTNTNSFDEPNKRRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 462 | 456 | 3.0E-113 | – | |
| PANTHER | 7 | 462 | 456 | 3.0E-113 | – | |
| MobiDBLite | 22 | 59 | 38 | - | – | |
| MobiDBLite | 172 | 186 | 15 | - | – | |
| MobiDBLite | 172 | 192 | 21 | - | – | |
| MobiDBLite | 205 | 220 | 16 | - | – | |
| MobiDBLite | 205 | 224 | 20 | - | – | |
| Gene3D | 235 | 311 | 77 | 4.1E-29 | ||
| ProSiteProfiles | 244 | 310 | 67 | 32.925 | ||
| SUPERFAMILY | 247 | 310 | 64 | 3.53E-26 | ||
| SMART | 249 | 309 | 61 | 1.4E-37 | ||
| Pfam | 251 | 308 | 58 | 1.1E-25 | ||
| MobiDBLite | 266 | 381 | 116 | - | – | |
| MobiDBLite | 293 | 342 | 50 | - | – | |
| MobiDBLite | 343 | 357 | 15 | - | – | |
| MobiDBLite | 358 | 375 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi6g1v0264600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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