Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0275100 |
| Transcript ID | LotjaGi6g1v0275100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-6-phosphate/phosphate translocator; TAIR: AT5G17630.1 Nucleotide/sugar transporter family protein; Swiss-Prot: sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic; TrEMBL-Plants: tr|A0A151SZV9|A0A151SZV9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0275100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59192204..59193426) extracted from Lotus japonicus Gifu genome v1.2.
ACCAATTTTCCATTAATGCTCACCCCATTCTCAAACCAAATCTTCTCAGAAGGTTCCACAGAGCCACTTCTCAGCTTCAT GAATCAGCTTTCAAAACCTCCAACCTTTCTCTCACACCCACATCTCAGATCCATCCTCCAATCACAAAGTTAAAATCTTT CACCAGATTCCCCTCACTCTCATTTGATTCCTCTGCTAGAATCAGACACCAGATTGTTAAAGCAGCACCTGATGCTGATG CCAATCCTGAGGGAGAGAGTCCAGCAGCAGCTCCTATTGTTCCAAAATCCAAGAATCTCAAACTAGCTCTTGTCTTTGGG CTATGGTACTTCCAGAACATTGTCTTCAACATTTACAACAAGAAGGCCTTAAACATATTCCCATTCCCATGGTTCCTTGC CTCCTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTCTGGTCTTTGAAGCTCCAACCTTGTCCCAAAATCTCAA AATCCTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCTAAA GTTGCTGTGTCCTTCACACATGTCATCAAGTCTGCAGAACCAGTTTTCTCTGTCATTTTCTCTTCTGTGCTTGGTGATAG GTACCCCATTCAGGTTTGGCTGTCCATTCTACCTATTGTGTTTGGTTGTTCTTTAGCTGTTGTTACTGAGGTTACTTTCA ATATGCAAGGATTGTGGGGTGCCCTCATTAGCAATGTTGGTTTTGTGTTGAGGAACATTTACTCTAAAAGAAGCTTGCAG AATTTCAAGGAAGTTGATGGCTTAAACTTATATGGATTTATTACTATACTTTCACTGTTCTACTTGTTTCCAGTGGCTAT TTTTGTTGAAGGGTCTCAGTGGATCCCAGGGTATTACAAGGCAATTGAAACTATAGGCAAACCATCCACATTTTATATAT GGGTTTTGGTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCCTTGGATGAAATTAGCCCTTTAACT TTCTCTGTGGGAAACACTATGAAGAGAGTGGTGGTGATTGTGGCTACTATTTTGGTGTTCAGGAATCCGGTTAGGCCTCT TAATGGCCTTGGTTCTGCCATAGCGATTCTCGGGACATTCCTGTATTCTCAGGCAACATCTGCAAAGACAGCAAAGAAAA TTGAAGGTGAAAAGAGTAGTTAG
CDS sequence (LotjaGi6g1v0275100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGGTGCTCTGGTCTTTGAAGCTCCAACCTTGTCCCAAAATCTCAAAATCCTTCATCATTGCTCTCCTTGGACCTGC TTTGTTCCACACAATAGGCCACATATCAGCTTGTGTTTCATTCTCTAAAGTTGCTGTGTCCTTCACACATGTCATCAAGT CTGCAGAACCAGTTTTCTCTGTCATTTTCTCTTCTGTGCTTGGTGATAGGTACCCCATTCAGGTTTGGCTGTCCATTCTA CCTATTGTGTTTGGTTGTTCTTTAGCTGTTGTTACTGAGGTTACTTTCAATATGCAAGGATTGTGGGGTGCCCTCATTAG CAATGTTGGTTTTGTGTTGAGGAACATTTACTCTAAAAGAAGCTTGCAGAATTTCAAGGAAGTTGATGGCTTAAACTTAT ATGGATTTATTACTATACTTTCACTGTTCTACTTGTTTCCAGTGGCTATTTTTGTTGAAGGGTCTCAGTGGATCCCAGGG TATTACAAGGCAATTGAAACTATAGGCAAACCATCCACATTTTATATATGGGTTTTGGTGTCTGGGGTGTTCTACCATCT TTATAACCAATCATCTTACCAAGCCTTGGATGAAATTAGCCCTTTAACTTTCTCTGTGGGAAACACTATGAAGAGAGTGG TGGTGATTGTGGCTACTATTTTGGTGTTCAGGAATCCGGTTAGGCCTCTTAATGGCCTTGGTTCTGCCATAGCGATTCTC GGGACATTCCTGTATTCTCAGGCAACATCTGCAAAGACAGCAAAGAAAATTGAAGGTGAAAAGAGTAGTTAG
Protein sequence (LotjaGi6g1v0275100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLVLWSLKLQPCPKISKSFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSIL PIVFGCSLAVVTEVTFNMQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGFITILSLFYLFPVAIFVEGSQWIPG YYKAIETIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVATILVFRNPVRPLNGLGSAIAIL GTFLYSQATSAKTAKKIEGEKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 246 | 246 | 3.0E-93 | ||
| PANTHER | 1 | 252 | 252 | 1.9E-118 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 252 | 252 | 1.9E-118 | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 47 | 5 | - | – | |
| Phobius | 48 | 68 | 21 | - | – | |
| Phobius | 69 | 74 | 6 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| TMHMM | 100 | 117 | 18 | - | – | |
| Phobius | 100 | 117 | 18 | - | – | |
| Phobius | 118 | 128 | 11 | - | – | |
| Phobius | 129 | 152 | 24 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| SUPERFAMILY | 142 | 247 | 106 | 3.79E-5 | – | |
| Phobius | 153 | 171 | 19 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 172 | 188 | 17 | - | – | |
| Phobius | 189 | 199 | 11 | - | – | |
| Phobius | 200 | 223 | 24 | - | – | |
| Phobius | 224 | 228 | 5 | - | – | |
| Phobius | 229 | 246 | 18 | - | – | |
| Phobius | 247 | 263 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0275100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…