Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0277100 |
Transcript ID | LotjaGi6g1v0277100.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G05390.1 S-adenosyl-L-methionine-dependent methyltransferase; Swiss-Prot: sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19; TrEMBL-Plants: tr|G7IFT7|G7IFT7_MEDTR ATRAD3, putative; Found in the gene: LotjaGi6g1v0277100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59399060..59404978) extracted from Lotus japonicus Gifu genome v1.2.
CCACGAGGCAATACATTCCTTGAACGTTCACATCGGCGCTTCACAATGACCCAAGCTCATATTTGATCAAAGGAACATGC ACATAACGTGGTGCATGTAGAATTAGAATTTTCTTTCCTTGGATCTGTATATCAGATCATAACCAATTCCCATATGTTAT AGTATTAATTAGCAACCTCAAATTAAACATTTCCACCATTCTGCTGTTTCTTTCTCGATCTTGTAAGGAAAGAGAGACAT GGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCACTTAGTCACAACCAAAAGCACAAGCTGAAATCCGTTA TGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCACAGGTCCATTTAGCTTTTTGTACCACTCCTCTCTGAGG CCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCAAAGCTCAACTTGCTGCCAGTCACTCACTCTTGTCTGA GCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGTAAACGAGAATCTAGACTCAACTCTACTAACTTAGTTGC CAAAGTAAAGGAGAATTTGGATGCAGGAGAAATTATGTGCATGTTTTGAAACTCGTTGAAAATCACAGTCAAGGCAAAAT CATGGTACCGAAGCAAAAACTAAGAGAAATTGTTTTTGTCCACCATGATTTTAGTTTCACCATGTTTTTCAAATGAGTTT CTAAACATGCAATATATCTCTATCACAAATTATCTCTATACCCAAATTAGGAAATATGTGTTATATTTAATTAGAATACT CTAATCAACAGTACATTATCAAATTAGGTGTATATGGCAACTTAGATTAGTTTCCATATATTCCATACTCCATAGCTATA TTGACATGTTTGCTTATTTTAGATACATGTACTGATGATTTATTCTTCGTAAATAACCACAATTATGTGATTTTATTATT CTCATCATTCCCTTTCCTTTCAATACCTTAACCTTATAATTTCATCATCAGGCTTTGCTTATTGATCTTACTCGCGAACA ATACAAGCAATCAAACAGAGCAGATCAGAACCCCATCACTTTGAAGCAGGAAAATGATGATTCCACAACATCTGATGAGC TCAACATTGCACTTGGCCCTCACAAGCTCCCATTTGGGCACTCACCAAGGATAGGATCAGATGAGATTCACATGAATATT GGTGAAGCCTGTTTGAGGCTCCATGATGAGTTAAACCAGTACATGACATATGAGATTGGAGGGGAATGTCCTGTAGATGA TATTCTTGCAGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTCCCACGTCGGCGATGCCACCCCAAGTCTCCTGCAAGTT ATGTAGAGCCAACACCTTTGCCAGATAGCCTCTGGAAAATCCCTCCAGACACCAGCATTATCTGGGATCCATATTCTTGT AAAAGCTACCAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAGGGTCCAATGACTGCAAGGATTGCTTTGATTTGCAGGG AAAAGAGAAGGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGAATAGACCAAGTTCTCGCGACAAAAGCTGCAG GAACAATCCGTATCGGACTCGACATTGGCGGCGGAACCGGAACATTTGCTGCCAGAATGAAGGAATGGAATGTGACAATC ATTACAAGCACTCTGAATTTGGATGGGCCATTCAACAACATGGTTGCATCAAGGGGTTTGATACCAATGCACGTTACCCT CTCTCAGAGGCTTCCATTCTTTGAAAACACACTGGATATTGTGCACTCCATGAATATCATTGGGAATTGGATACCAGACA CCACGCTTGAGTTTTTGTTGTATGATATATACAGGGTTTTGAGGCCAGGGGGGATATTCTGGCTTGACCATTTCTTCTGC TTTGATTCACAACTCAACCAGACTTATGTGCCAATGTTGGATCGAGTTGGATTCAATAAATTGAGATGGCATGTTGGATC GAAACTTGATCCTGGGGTTCACAAGAATGTGTGGTACATTTCAGCACTGATGGAGAAACCAATGATTTGAGGTAGGCATG TGATTTATGCATGCAAGTGCTAAATTAATGAACAAAGTTGCTTTTTTTTTATTGAAAAAAACTTCAAGTAAAAAGTGTGA AAGAGACCAATATGTGTATCATAGTCTTTCTTCTAAGCATGGGACTCTTCTATTAAGAAACACAGAACTTCACTCCTCAT GATTTGGTGATTTCATTTACTGGTGGTGATGCTTATGGTTGTGGGGTTTTCAATCTTATAACCAAATTAAGAGCAGCAAA GATAATTAAAGTGAGTTTATGACGATAAAGGTTTTGATACTTTTCACAAGATCATACGGTTAATGGTGATAATATAGAGT GAAAAATGATGTATCGTACATGTTCCATATCAAAACTGTTATCTACTCTACTACTTACTAAAGCTAAGCTAGAGGGTTTG GAGTACTGTTCATAAGAAAATACCCGCCAGAGCCGGGTCAAGGTCGGGTTATGGGTCGGGTTTGAAGCATGATGCAATGT CGTATCCCCAGATAGCAGACCAAAAACAGTTAGAGAACAATTCATTCTTCATTATAGAGAAAATGAACAATGTAAGTAAA ACATGTGATGAAGGTTGCTATAAAAATTAGTTCGATTTTCATTCACTAACACGTTCAAGAATGGTGAAACTCGATGAAAT TCCTGAGAGGGGTGTTTAGAATTGGAACAGTATGATCGCTGGATATGTGGCTGTTGGGGACCTGGAGGCTGCCATCAGAT CACTTCACATGTATATAGCTCTTGACATTATTTTGCCATTCAACATTAGACTCATCATCAACCAATTCATTGGAAGATGA GGTTAGAAGTTATATAAATAAAGTTAAATCTGAATCTCCAATTTCTGGATCCCTTTTCTCTGCTCCCGGCATTCCTGCTC CATCCGTAGTTTCCACAACTTTACATGTGCTTCCTGGAAAAGTTTTGGTTCCTGCAGCTGTTGATCAGGTTCAGGGGCAA GCACTAGCTGCATTGCAAGTTTTAAAGGTAATTATTTGTTTTCGTTCTCATGTATCAATATTACTATAATATTGTGAAGT TGTAGTTCAATTTTTTTAACACTGCTTGATTTTTATATCTATTCTGCTTAATTTAATTTCACCCAACAAAGAATTATAAA ATAATTCAAACCCAAATTTTCTGAAGCTGAGTTGAGTACAAATGCCTTGATACAAAATCCCGAAGTTACCATGAATGTAC TTAGACTTGAGCTGTATTGGTTCACTGTGATGTGTTGCTAACCCAAACGACATATTGAAGGTAGATTACTATGGTGAGTT GAGAATTTTGTGATTATGCATGTGGAGGTTACCTGGAGTCATGTCATGGTTGTTTTTTTTTTTGGATTCTAGGTCATGCA TGGTTTGCTTATATTATGATATGTTTATTTTGAAGGGATTCTAACATATTTGATTTTATAAAACCTTGGCAGGATGAAGT TAGGATGCAGGATATATCATGCCACATGTTTGTTTCTTAGGAGTAGTATGAAAACAAATCAGATCAATCATCAAATAGCT CCATTTCCTGTTGCATTTGATTCTGATTCTGAAGTATCATGGATATTTTTTTCATTTACTGATTAGAGTTTTATTGCTGT AGACATTCATAATGCTTCGAAGGCAGTGAAGCATGGACCTTATGTGGGAAAAACTGCAATTGGGGGTCCATTTCACCTTA CCAACCATCATGGGAAGCACCTTACTGAAAATGACTTCTTGGGGAAGTGGACAGTGATGTATTTTGGATTTACTGCCTAA ATATCTGCCCTGATGAACTACAGAAGTTAGCAGATGCAGTTGATAAAATAAGTAAGCTTTTGTTGGTGATTTGCTTTGTG TAGCAAACTGAGTTTTATGCATTTCATAGCAAGATATTCTCTTTCTCATAGTTGTTAGCTGCGCTCATAGTTGCATCCTT ATACTAATCAGTTATATTTACTTTAACTTTATACTCGATACATTAACGTAGTACCTATGTTTTCTTTTAAATTTTATAAA TCTGTGGTTTGCAGCAAGAAATCTTTTAATAGGGGAAACAAACAAATGTTGACAAACATGTCTCATGAGATAAGAATTCC ACTATCTGGGGTTGTTAACATTGTTGTAATTCTTTCTACCGCATAACTTGATCTAGAATGAAGACATGTCTTAGATCTCA TGCTATCTTTAGGATATTTGGTTCTTCAACTATATACTTGATCTTTCCAAGGCTGATTCAGATACAAGTCTATCCTTGAT ATATTTCATTTTAGTGTTAAAAGAGACATAATCCTTAAATATATACTCCATTTGAGCGAATGTATTTTGGCACTATGCCT ATCATAGCCGTGAATTTTCTCTGATTTAAAGTAAACTAAGAAACATCACAGAAACTGAAATTAAGAAAAAGGAGAAGAAA ATCTATGGTACACATCTGGCTTATGTGCTGTGTTTTGCATCCTTCTTTAATATGTTGTGCTTTTCTTTTCATTAACCACC CTGAGAAACCTTGCTTCCTCCCTTAATGCAGAATTAGAACAAGTGATGAAAGAGCAAGAGGAACTGAAGGAGAATTAAAA AGCATCAGAAGCTCTTGCTGCTAACCAACTGTTGAAATTCAAAGCAACAAGGAAGAGACAGGTTATGTAGAGGAAAAAGA TTCTGATGCATGTTTCTTAACCTATTTGCATTTTTCTAACAATGTTCTTAAAGGTAGACATATTCTTATTTATTTCTGTT TTGAATGCAATGACATTTCCGACAATTTGTGCTAATAATCCTCTAAATGTTCTGTACTACTTCTGTTGTTGACTCCAGCC TCACTCTCTTAACTAGGACTATTAATTCTAAAATGGTTGTGTTTCTGCTTACTTTCTAATGAGGAATACCTTGTGAGCTA TTGCATTACTAGGTTAGTGATCCATTCACCTCTTTATATGGAATTACATCTCTGCCTTATATTTTTAATTAGTTTTGACT TTCTTCTGTTTTACCCTTCCTTAGGCTTAGTTTAGTTGGTTGATTGGTACTTTGTGAGTTAATGTATTTTTTTTTTGTCA TCTCTGTTTTAATATAGTTTAGTTTAGATCTATTTTAATTGTATCCTACCCATTAAACATATCTCTACCCATCAAAACAA TATCCTACAAAATCTGTTTTAACATACATATTTATTTGGCAATGGCTTAATTCTATTGAAACTGGTTTGCTCAATAGACA CTTTCTATCATTTGTCTTAATTAAATTTATCTAATTCTGCCAATTATCTATTTGTTGCATGTTGTCTTCATGATAATGAA TATCTTTGATATCTTGAAATAGTTAGATGAATAGGTTGCCTTAATATGTGTTTTAGTTGTTGGATTGATCAACCTATCAA AATGCGTAGGGAAGAAAGGGCTCTAGCACAAAGATGAAGGTTGGTGTGTTCATTCTAAGGGAAGAAAGGGTTTGAGCACA AAGAAGCAGGTTGAATTCTAAATGCTATTGTTCAAGCACAACAATGCTTTATATGTTTACTCTTTCTATATTGTAAATTG ATGTTGGTTGTTTCTACCATACATTTTCCTTTTGTTTTTAGCTTCATGAAACTGTGTTTGATTAAGATATTCACCTGGTT TTTTTAATAGTAAGTAAGATTACAAGGATGATGAATTTTATCAAGTGAGGTCAAATGGATTGGATATGGAGTTGAGGGAT AATTTGGGGCAAGACTTTGATGTTAATCTTTTAATACAATGGGAACTTTACATGATAGAATTGGCAGTTTTTTCCTTTTC TAAATATCCAAAATGATCGTTTCTTTTAAGTTATGTTCTTTTTCCATTTGTGAAAATTTACTTGCAATTTCTTTTTATT
CDS sequence (LotjaGi6g1v0277100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCACTTAGTCACAACCAAAAGCACAAGCTGAAATCCGT TATGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCACAGGTCCATTTAGCTTTTTGTACCACTCCTCTCTGA GGCCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCAAAGCTCAACTTGCTGCCAGTCACTCACTCTTGTCT GAGCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGCTTTGCTTATTGATCTTACTCGCGAACAATACAAGCA ATCAAACAGAGCAGATCAGAACCCCATCACTTTGAAGCAGGAAAATGATGATTCCACAACATCTGATGAGCTCAACATTG CACTTGGCCCTCACAAGCTCCCATTTGGGCACTCACCAAGGATAGGATCAGATGAGATTCACATGAATATTGGTGAAGCC TGTTTGAGGCTCCATGATGAGTTAAACCAGTACATGACATATGAGATTGGAGGGGAATGTCCTGTAGATGATATTCTTGC AGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTCCCACGTCGGCGATGCCACCCCAAGTCTCCTGCAAGTTATGTAGAGC CAACACCTTTGCCAGATAGCCTCTGGAAAATCCCTCCAGACACCAGCATTATCTGGGATCCATATTCTTGTAAAAGCTAC CAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAGGGTCCAATGACTGCAAGGATTGCTTTGATTTGCAGGGAAAAGAGAA GGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGAATAGACCAAGTTCTCGCGACAAAAGCTGCAGGAACAATCC GTATCGGACTCGACATTGGCGGCGGAACCGGAACATTTGCTGCCAGAATGAAGGAATGGAATGTGACAATCATTACAAGC ACTCTGAATTTGGATGGGCCATTCAACAACATGGTTGCATCAAGGGGTTTGATACCAATGCACGTTACCCTCTCTCAGAG GCTTCCATTCTTTGAAAACACACTGGATATTGTGCACTCCATGAATATCATTGGGAATTGGATACCAGACACCACGCTTG AGTTTTTGTTGTATGATATATACAGGGTTTTGAGGCCAGGGGGGATATTCTGGCTTGACCATTTCTTCTGCTTTGATTCA CAACTCAACCAGACTTATGTGCCAATGTTGGATCGAGTTGGATTCAATAAATTGAGATGGCATGTTGGATCGAAACTTGA TCCTGGGGTTCACAAGAATGTGTGGTACATTTCAGCACTGATGGAGAAACCAATGATTTGA
Protein sequence (LotjaGi6g1v0277100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIEAHDQQHSKKLPLSHNQKHKLKSVMLIIFTNLVTIYIFTGPFSFLYHSSLRPSDSNSILQELNSTKAQLAASHSLLS ELHHRLNSTNLLIQALLIDLTREQYKQSNRADQNPITLKQENDDSTTSDELNIALGPHKLPFGHSPRIGSDEIHMNIGEA CLRLHDELNQYMTYEIGGECPVDDILAESLMLKGCEPLPRRRCHPKSPASYVEPTPLPDSLWKIPPDTSIIWDPYSCKSY QCLVDRKNELGGSNDCKDCFDLQGKEKGRWIFDDGGLDFGIDQVLATKAAGTIRIGLDIGGGTGTFAARMKEWNVTIITS TLNLDGPFNNMVASRGLIPMHVTLSQRLPFFENTLDIVHSMNIIGNWIPDTTLEFLLYDIYRVLRPGGIFWLDHFFCFDS QLNQTYVPMLDRVGFNKLRWHVGSKLDPGVHKNVWYISALMEKPMI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 26 | 26 | - | – | |
PANTHER | 8 | 445 | 438 | 1.5E-222 | – | |
PANTHER | 8 | 445 | 438 | 1.5E-222 | – | |
Phobius | 27 | 49 | 23 | - | – | |
TMHMM | 27 | 49 | 23 | - | – | |
Phobius | 50 | 446 | 397 | - | – | |
MobiDBLite | 108 | 129 | 22 | - | – | |
Gene3D | 277 | 437 | 161 | 1.4E-11 | – | |
Pfam | 281 | 391 | 111 | 5.2E-7 | ||
SUPERFAMILY | 293 | 420 | 128 | 1.34E-13 | ||
CDD | 297 | 397 | 101 | 1.82135E-4 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0277100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…