Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi6g1v0277100.2

Overview

Field Value
Gene ID LotjaGi6g1v0277100
Transcript ID LotjaGi6g1v0277100.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G05390.1 S-adenosyl-L-methionine-dependent methyltransferase; Swiss-Prot: sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19; TrEMBL-Plants: tr|G7IFT7|G7IFT7_MEDTR ATRAD3, putative; Found in the gene: LotjaGi6g1v0277100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:59399103..59404859) extracted from Lotus japonicus Gifu genome v1.2.

CAATGACCCAAGCTCATATTTGATCAAAGGAACATGCACATAACGTGGTGCATGTAGAATTAGAATTTTCTTTCCTTGGA TCTGTATATCAGATCATAACCAATTCCCATATGTTATAGTATTAATTAGCAACCTCAAATTAAACATTTCCACCATTCTG CTGTTTCTTTCTCGATCTTGTAAGGAAAGAGAGACATGGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCA CTTAGTCACAACCAAAAGCACAAGCTGAAATCCGTTATGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCAC AGGTCCATTTAGCTTTTTGTACCACTCCTCTCTGAGGCCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCA AAGCTCAACTTGCTGCCAGTCACTCACTCTTGTCTGAGCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGTA AACGAGAATCTAGACTCAACTCTACTAACTTAGTTGCCAAAGTAAAGGAGAATTTGGATGCAGGAGAAATTATGTGCATG TTTTGAAACTCGTTGAAAATCACAGTCAAGGCAAAATCATGGTACCGAAGCAAAAACTAAGAGAAATTGTTTTTGTCCAC CATGATTTTAGTTTCACCATGTTTTTCAAATGAGTTTCTAAACATGCAATATATCTCTATCACAAATTATCTCTATACCC AAATTAGGAAATATGTGTTATATTTAATTAGAATACTCTAATCAACAGTACATTATCAAATTAGGTGTATATGGCAACTT AGATTAGTTTCCATATATTCCATACTCCATAGCTATATTGACATGTTTGCTTATTTTAGATACATGTACTGATGATTTAT TCTTCGTAAATAACCACAATTATGTGATTTTATTATTCTCATCATTCCCTTTCCTTTCAATACCTTAACCTTATAATTTC ATCATCAGGCTTTGCTTATTGATCTTACTCGCGAACAATACAAGCAATCAAACAGAGCAGATCAGAACCCCATCACTTTG AAGCAGGAAAATGATGATTCCACAACATCTGATGAGCTCAACATTGCACTTGGCCCTCACAAGCTCCCATTTGGGCACTC ACCAAGGATAGGATCAGATGAGATTCACATGAATATTGGTGAAGCCTGTTTGAGGCTCCATGATGAGTTAAACCAGTACA TGACATATGAGATTGGAGGGGAATGTCCTGTAGATGATATTCTTGCAGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTC CCACGTCGGCGATGCCACCCCAAGTCTCCTGCAAGTTATGTAGAGCCAACACCTTTGCCAGATAGCCTCTGGAAAATCCC TCCAGACACCAGCATTATCTGGGATCCATATTCTTGTAAAAGCTACCAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAG GGTCCAATGACTGCAAGGATTGCTTTGATTTGCAGGGAAAAGAGAAGGGTAGGTGGATCTTTGATGATGGTGGACTTGAT TTTGGAATAGACCAAGTTCTCGCGACAAAAGCTGCAGGAACAATCCGTATCGGACTCGACATTGGCGGCGGAACCGGAAC ATTTGCTGCCAGAATGAAGGAATGGAATGTGACAATCATTACAAGCACTCTGAATTTGGATGGGCCATTCAACAACATGG TTGCATCAAGGGGTTTGATACCAATGCACGTTACCCTCTCTCAGAGGCTTCCATTCTTTGAAAACACACTGGATATTGTG CACTCCATGAATATCATTGGGAATTGGATACCAGACACCACGCTTGAGTTTTTGTTGTATGATATATACAGGGTTTTGAG GCCAGGGGGGATATTCTGGCTTGACCATTTCTTCTGCTTTGATTCACAACTCAACCAGACTTATGTGCCAATGTTGGATC GAGTTGGATTCAATAAATTGAGATGGCATGTTGGATCGAAACTTGATCCTGGGGTTCACAAGAATGTGTGGTACATTTCA GCACTGATGGAGAAACCAATGATTTGAGGTAGGCATGTGATTTATGCATGCAAGTGCTAAATTAATGAACAAAGTTGCTT TTTTTTTATTGAAAAAAACTTCAAGTAAAAAGTGTGAAAGAGACCAATATGTGTATCATAGTCTTTCTTCTAAGCATGGG ACTCTTCTATTAAGAAACACAGAACTTCACTCCTCATGATTTGGTGATTTCATTTACTGGTGGTGATGCTTATGGTTGTG GGGTTTTCAATCTTATAACCAAATTAAGAGCAGCAAAGATAATTAAAGTGAGTTTATGACGATAAAGGTTTTGATACTTT TCACAAGATCATACGGTTAATGGTGATAATATAGAGTGAAAAATGATGTATCGTACATGTTCCATATCAAAACTGTTATC TACTCTACTACTTACTAAAGCTAAGCTAGAGGGTTTGGAGTACTGTTCATAAGAAAATACCCGCCAGAGCCGGGTCAAGG TCGGGTTATGGGTCGGGTTTGAAGCATGATGCAATGTCGTATCCCCAGATAGCAGACCAAAAACAGTTAGAGAACAATTC ATTCTTCATTATAGAGAAAATGAACAATGTAAGTAAAACATGTGATGAAGGTTGCTATAAAAATTAGTTCGATTTTCATT CACTAACACGTTCAAGAATGGTGAAACTCGATGAAATTCCTGAGAGGGGTGTTTAGAATTGGAACAGTATGATCGCTGGA TATGTGGCTGTTGGGGACCTGGAGGCTGCCATCAGATCACTTCACATGTATATAGCTCTTGACATTATTTTGCCATTCAA CATTAGACTCATCATCAACCAATTCATTGGAAGATGAGGTTAGAAGTTATATAAATAAAGTTAAATCTGAATCTCCAATT TCTGGATCCCTTTTCTCTGCTCCCGGCATTCCTGCTCCATCCGTAGTTTCCACAACTTTACATGTGCTTCCTGGAAAAGT TTTGGTTCCTGCAGCTGTTGATCAGGTTCAGGGGCAAGCACTAGCTGCATTGCAAGTTTTAAAGGTAATTATTTGTTTTC GTTCTCATGTATCAATATTACTATAATATTGTGAAGTTGTAGTTCAATTTTTTTAACACTGCTTGATTTTTATATCTATT CTGCTTAATTTAATTTCACCCAACAAAGAATTATAAAATAATTCAAACCCAAATTTTCTGAAGCTGAGTTGAGTACAAAT GCCTTGATACAAAATCCCGAAGTTACCATGAATGTACTTAGACTTGAGCTGTATTGGTTCACTGTGATGTGTTGCTAACC CAAACGACATATTGAAGGTAGATTACTATGGTGAGTTGAGAATTTTGTGATTATGCATGTGGAGGTTACCTGGAGTCATG TCATGGTTGTTTTTTTTTTTGGATTCTAGGTCATGCATGGTTTGCTTATATTATGATATGTTTATTTTGAAGGGATTCTA ACATATTTGATTTTATAAAACCTTGGCAGGATGAAGTTAGGATGCAGGATATATCATGCCACATGTTTGTTTCTTAGGAG TAGTATGAAAACAAATCAGATCAATCATCAAATAGCTCCATTTCCTGTTGCATTTGATTCTGATTCTGAAGTATCATGGA TATTTTTTTCATTTACTGATTAGAGTTTTATTGCTGTAGACATTCATAATGCTTCGAAGGCAGTGAAGCATGGACCTTAT GTGGGAAAAACTGCAATTGGGGGTCCATTTCACCTTACCAACCATCATGGGAAGCACCTTACTGAAAATGACTTCTTGGG GAAGTGGACAGTGATGTATTTTGGATTTACTGCCTAAATATCTGCCCTGATGAACTACAGAAGTTAGCAGATGCAGTTGA TAAAATAAGTAAGCTTTTGTTGGTGATTTGCTTTGTGTAGCAAACTGAGTTTTATGCATTTCATAGCAAGATATTCTCTT TCTCATAGTTGTTAGCTGCGCTCATAGTTGCATCCTTATACTAATCAGTTATATTTACTTTAACTTTATACTCGATACAT TAACGTAGTACCTATGTTTTCTTTTAAATTTTATAAATCTGTGGTTTGCAGCAAGAAATCTTTTAATAGGGGAAACAAAC AAATGTTGACAAACATGTCTCATGAGATAAGAATTCCACTATCTGGGGTTGTTAACATTGTTGTAATTCTTTCTACCGCA TAACTTGATCTAGAATGAAGACATGTCTTAGATCTCATGCTATCTTTAGGATATTTGGTTCTTCAACTATATACTTGATC TTTCCAAGGCTGATTCAGATACAAGTCTATCCTTGATATATTTCATTTTAGTGTTAAAAGAGACATAATCCTTAAATATA TACTCCATTTGAGCGAATGTATTTTGGCACTATGCCTATCATAGCCGTGAATTTTCTCTGATTTAAAGTAAACTAAGAAA CATCACAGAAACTGAAATTAAGAAAAAGGAGAAGAAAATCTATGGTACACATCTGGCTTATGTGCTGTGTTTTGCATCCT TCTTTAATATGTTGTGCTTTTCTTTTCATTAACCACCCTGAGAAACCTTGCTTCCTCCCTTAATGCAGAATTAGAACAAG TGATGAAAGAGCAAGAGGAACTGAAGGAGAATTAAAAAGCATCAGAAGCTCTTGCTGCTAACCAACTGTTGAAATTCAAA GCAACAAGGAAGAGACAGGTTATGTAGAGGAAAAAGATTCTGATGCATGTTTCTTAACCTATTTGCATTTTTCTAACAAT GTTCTTAAAGGTAGACATATTCTTATTTATTTCTGTTTTGAATGCAATGACATTTCCGACAATTTGTGCTAATAATCCTC TAAATGTTCTGTACTACTTCTGTTGTTGACTCCAGCCTCACTCTCTTAACTAGGACTATTAATTCTAAAATGGTTGTGTT TCTGCTTACTTTCTAATGAGGAATACCTTGTGAGCTATTGCATTACTAGGTTAGTGATCCATTCACCTCTTTATATGGAA TTACATCTCTGCCTTATATTTTTAATTAGTTTTGACTTTCTTCTGTTTTACCCTTCCTTAGGCTTAGTTTAGTTGGTTGA TTGGTACTTTGTGAGTTAATGTATTTTTTTTTTGTCATCTCTGTTTTAATATAGTTTAGTTTAGATCTATTTTAATTGTA TCCTACCCATTAAACATATCTCTACCCATCAAAACAATATCCTACAAAATCTGTTTTAACATACATATTTATTTGGCAAT GGCTTAATTCTATTGAAACTGGTTTGCTCAATAGACACTTTCTATCATTTGTCTTAATTAAATTTATCTAATTCTGCCAA TTATCTATTTGTTGCATGTTGTCTTCATGATAATGAATATCTTTGATATCTTGAAATAGTTAGATGAATAGGTTGCCTTA ATATGTGTTTTAGTTGTTGGATTGATCAACCTATCAAAATGCGTAGGGAAGAAAGGGCTCTAGCACAAAGATGAAGGTTG GTGTGTTCATTCTAAGGGAAGAAAGGGTTTGAGCACAAAGAAGCAGGTTGAATTCTAAATGCTATTGTTCAAGCACAACA ATGCTTTATATGTTTACTCTTTCTATATTGTAAATTGATGTTGGTTGTTTCTACCATACATTTTCCTTTTGTTTTTAGCT TCATGAAACTGTGTTTGATTAAGATATTCACCTGGTTTTTTTAATAGTAAGTAAGATTACAAGGATGATGAATTTTATCA AGTGAGGTCAAATGGATTGGATATGGAGTTGAGGGATAATTTGGGGCAAGACTTTGATGTTAATCTTTTAATACAAT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0277100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCACTTAGTCACAACCAAAAGCACAAGCTGAAATCCGT TATGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCACAGGTCCATTTAGCTTTTTGTACCACTCCTCTCTGA GGCCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCAAAGCTCAACTTGCTGCCAGTCACTCACTCTTGTCT GAGCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGCTTTGCTTATTGATCTTACTCGCGAACAATACAAGCA ATCAAACAGAGCAGATCAGAACCCCATCACTTTGAAGCAGGAAAATGATGATTCCACAACATCTGATGAGCTCAACATTG CACTTGGCCCTCACAAGCTCCCATTTGGGCACTCACCAAGGATAGGATCAGATGAGATTCACATGAATATTGGTGAAGCC TGTTTGAGGCTCCATGATGAGTTAAACCAGTACATGACATATGAGATTGGAGGGGAATGTCCTGTAGATGATATTCTTGC AGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTCCCACGTCGGCGATGCCACCCCAAGTCTCCTGCAAGTTATGTAGAGC CAACACCTTTGCCAGATAGCCTCTGGAAAATCCCTCCAGACACCAGCATTATCTGGGATCCATATTCTTGTAAAAGCTAC CAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAGGGTCCAATGACTGCAAGGATTGCTTTGATTTGCAGGGAAAAGAGAA GGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGAATAGACCAAGTTCTCGCGACAAAAGCTGCAGGAACAATCC GTATCGGACTCGACATTGGCGGCGGAACCGGAACATTTGCTGCCAGAATGAAGGAATGGAATGTGACAATCATTACAAGC ACTCTGAATTTGGATGGGCCATTCAACAACATGGTTGCATCAAGGGGTTTGATACCAATGCACGTTACCCTCTCTCAGAG GCTTCCATTCTTTGAAAACACACTGGATATTGTGCACTCCATGAATATCATTGGGAATTGGATACCAGACACCACGCTTG AGTTTTTGTTGTATGATATATACAGGGTTTTGAGGCCAGGGGGGATATTCTGGCTTGACCATTTCTTCTGCTTTGATTCA CAACTCAACCAGACTTATGTGCCAATGTTGGATCGAGTTGGATTCAATAAATTGAGATGGCATGTTGGATCGAAACTTGA TCCTGGGGTTCACAAGAATGTGTGGTACATTTCAGCACTGATGGAGAAACCAATGATTTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0277100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGIEAHDQQHSKKLPLSHNQKHKLKSVMLIIFTNLVTIYIFTGPFSFLYHSSLRPSDSNSILQELNSTKAQLAASHSLLS ELHHRLNSTNLLIQALLIDLTREQYKQSNRADQNPITLKQENDDSTTSDELNIALGPHKLPFGHSPRIGSDEIHMNIGEA CLRLHDELNQYMTYEIGGECPVDDILAESLMLKGCEPLPRRRCHPKSPASYVEPTPLPDSLWKIPPDTSIIWDPYSCKSY QCLVDRKNELGGSNDCKDCFDLQGKEKGRWIFDDGGLDFGIDQVLATKAAGTIRIGLDIGGGTGTFAARMKEWNVTIITS TLNLDGPFNNMVASRGLIPMHVTLSQRLPFFENTLDIVHSMNIIGNWIPDTTLEFLLYDIYRVLRPGGIFWLDHFFCFDS QLNQTYVPMLDRVGFNKLRWHVGSKLDPGVHKNVWYISALMEKPMI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 26 26 - –
PANTHER
PTHR44067
8 445 438 1.5E-222 –
PANTHER
PTHR44067:SF10
8 445 438 1.5E-222 –
Phobius
TRANSMEMBRANE
27 49 23 - –
TMHMM
TMhelix
27 49 23 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
50 446 397 - –
MobiDBLite
mobidb-lite
108 129 22 - –
Gene3D
G3DSA:3.40.50.150
277 437 161 1.4E-11 –
Pfam
PF03141
281 391 111 5.2E-7
IPR004159
SUPERFAMILY
SSF53335
293 420 128 1.34E-13
IPR029063
CDD
cd02440
297 397 101 1.82135E-4 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0277100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…