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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0277100 |
| Transcript ID | LotjaGi6g1v0277100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G05390.1 S-adenosyl-L-methionine-dependent methyltransferase; Swiss-Prot: sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19; TrEMBL-Plants: tr|G7IFT7|G7IFT7_MEDTR ATRAD3, putative; Found in the gene: LotjaGi6g1v0277100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59399275..59401129) extracted from Lotus japonicus Gifu genome v1.2.
CGATCTTGTAAGGAAAGAGAGACATGGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCACTTAGTCACAAC CAAAAGCACAAGCTGAAATCCGTTATGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCACAGGTCCATTTAG CTTTTTGTACCACTCCTCTCTGAGGCCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCAAAGCTCAACTTG CTGCCAGTCACTCACTCTTGTCTGAGCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGTAAACGAGAATCTA GACTCAACTCTACTAACTTAGTTGCCAAAGTAAAGGAGAATTTGGATGCAGGAGAAATTATGTGCATGTTTTGAAACTCG TTGAAAATCACAGTCAAGGCAAAATCATGGTACCGAAGCAAAAACTAAGAGAAATTGTTTTTGTCCACCATGATTTTAGT TTCACCATGTTTTTCAAATGAGTTTCTAAACATGCAATATATCTCTATCACAAATTATCTCTATACCCAAATTAGGAAAT ATGTGTTATATTTAATTAGAATACTCTAATCAACAGTACATTATCAAATTAGGTGTATATGGCAACTTAGATTAGTTTCC ATATATTCCATACTCCATAGCTATATTGACATGTTTGCTTATTTTAGATACATGTACTGATGATTTATTCTTCGTAAATA ACCACAATTATGTGATTTTATTATTCTCATCATTCCCTTTCCTTTCAATACCTTAACCTTATAATTTCATCATCAGGCTT TGCTTATTGATCTTACTCGCGAACAATACAAGCAATCAAACAGAGCAGATCAGAACCCCATCACTTTGAAGCAGGAAAAT GATGATTCCACAACATCTGATGAGCTCAACATTGCACTTGGCCCTCACAAGCTCCCATTTGGGCACTCACCAAGGATAGG ATCAGATGAGATTCACATGAATATTGGTGAAGCCTGTTTGAGGCTCCATGATGAGTTAAACCAGTACATGACATATGAGA TTGGAGGGGAATGTCCTGTAGATGATATTCTTGCAGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTCCCACGTCGGCGA TGCCACCCCAAGTCTCCTGCAAGTTATGTAGAGCCAACACCTTTGCCAGATAGCCTCTGGAAAATCCCTCCAGACACCAG CATTATCTGGGATCCATATTCTTGTAAAAGCTACCAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAGGGTCCAATGACT GCAAGGATTGCTTTGATTTGCAGGGAAAAGAGAAGGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGAATAGAC CAAGTTCTCGCGACAAAAGCTGCAGGAACAATCCGTATCGGACTCGACATTGGCGGCGGAACCGGAACATTTGCTGCCAG AATGAAGGAATGGAATGTGACAATCATTACAAGCACTCTGAATTTGGATGGGCCATTCAACAACATGGTTGCATCAAGGG GTTTGATACCAATGCACGTTACCCTCTCTCAGAGGCTTCCATTCTTTGAAAACACACTGGATATTGTGCACTCCATGAAT ATCATTGGGAATTGGATACCAGACACCACGCTTGAGTTTTTGTTGTATGATATATACAGGGTTTTGAGGCCAGGGGGGAT ATTCTGGCTTGACCATTTCTTCTGCTTTGATTCACAACTCAACCAGACTTATGTGCCAATGTTGGATCGAGTTGGATTCA ATAAATTGAGATGGCATGTTGGATCGAAACTTGATCCTGGGGTTCACAAGAATGTGTGGTACATTTCAGCACTGATGGAG AAACCAATGATTTGA
CDS sequence (LotjaGi6g1v0277100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTATTGAAGCTCATGACCAACAACACTCAAAAAAGCTGCCACTTAGTCACAACCAAAAGCACAAGCTGAAATCCGT TATGCTAATCATTTTCACCAACCTTGTCACCATTTACATTTTCACAGGTCCATTTAGCTTTTTGTACCACTCCTCTCTGA GGCCCAGTGACTCAAACTCTATACTGCAGGAACTCAACTCCACCAAAGCTCAACTTGCTGCCAGTCACTCACTCTTGTCT GAGCTGCACCATAGGCTCAACTCTACCAATTTACTTATCCAGGCTTTGCTTATTGATCTTACTCGCGAACAATACAAGCA ATCAAACAGAGCAGATCAGAACCCCATCACTTTGAAGCAGGAAAATGATGATTCCACAACATCTGATGAGCTCAACATTG CACTTGGCCCTCACAAGCTCCCATTTGGGCACTCACCAAGGATAGGATCAGATGAGATTCACATGAATATTGGTGAAGCC TGTTTGAGGCTCCATGATGAGTTAAACCAGTACATGACATATGAGATTGGAGGGGAATGTCCTGTAGATGATATTCTTGC AGAAAGCCTCATGCTCAAAGGGTGTGAACCGCTCCCACGTCGGCGATGCCACCCCAAGTCTCCTGCAAGTTATGTAGAGC CAACACCTTTGCCAGATAGCCTCTGGAAAATCCCTCCAGACACCAGCATTATCTGGGATCCATATTCTTGTAAAAGCTAC CAGTGCCTTGTTGATAGAAAGAATGAGCTAGGAGGGTCCAATGACTGCAAGGATTGCTTTGATTTGCAGGGAAAAGAGAA GGGTAGGTGGATCTTTGATGATGGTGGACTTGATTTTGGAATAGACCAAGTTCTCGCGACAAAAGCTGCAGGAACAATCC GTATCGGACTCGACATTGGCGGCGGAACCGGAACATTTGCTGCCAGAATGAAGGAATGGAATGTGACAATCATTACAAGC ACTCTGAATTTGGATGGGCCATTCAACAACATGGTTGCATCAAGGGGTTTGATACCAATGCACGTTACCCTCTCTCAGAG GCTTCCATTCTTTGAAAACACACTGGATATTGTGCACTCCATGAATATCATTGGGAATTGGATACCAGACACCACGCTTG AGTTTTTGTTGTATGATATATACAGGGTTTTGAGGCCAGGGGGGATATTCTGGCTTGACCATTTCTTCTGCTTTGATTCA CAACTCAACCAGACTTATGTGCCAATGTTGGATCGAGTTGGATTCAATAAATTGAGATGGCATGTTGGATCGAAACTTGA TCCTGGGGTTCACAAGAATGTGTGGTACATTTCAGCACTGATGGAGAAACCAATGATTTGA
Protein sequence (LotjaGi6g1v0277100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIEAHDQQHSKKLPLSHNQKHKLKSVMLIIFTNLVTIYIFTGPFSFLYHSSLRPSDSNSILQELNSTKAQLAASHSLLS ELHHRLNSTNLLIQALLIDLTREQYKQSNRADQNPITLKQENDDSTTSDELNIALGPHKLPFGHSPRIGSDEIHMNIGEA CLRLHDELNQYMTYEIGGECPVDDILAESLMLKGCEPLPRRRCHPKSPASYVEPTPLPDSLWKIPPDTSIIWDPYSCKSY QCLVDRKNELGGSNDCKDCFDLQGKEKGRWIFDDGGLDFGIDQVLATKAAGTIRIGLDIGGGTGTFAARMKEWNVTIITS TLNLDGPFNNMVASRGLIPMHVTLSQRLPFFENTLDIVHSMNIIGNWIPDTTLEFLLYDIYRVLRPGGIFWLDHFFCFDS QLNQTYVPMLDRVGFNKLRWHVGSKLDPGVHKNVWYISALMEKPMI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 8 | 445 | 438 | 1.5E-222 | – | |
| PANTHER | 8 | 445 | 438 | 1.5E-222 | – | |
| Phobius | 27 | 49 | 23 | - | – | |
| TMHMM | 27 | 49 | 23 | - | – | |
| Phobius | 50 | 446 | 397 | - | – | |
| MobiDBLite | 108 | 129 | 22 | - | – | |
| Gene3D | 277 | 437 | 161 | 1.4E-11 | – | |
| Pfam | 281 | 391 | 111 | 5.2E-7 | ||
| SUPERFAMILY | 293 | 420 | 128 | 1.34E-13 | ||
| CDD | 297 | 397 | 101 | 1.82135E-4 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0277100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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