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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0280600 |
| Transcript ID | LotjaGi6g1v0280600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF2431 domain protein; TAIR: AT1G55790.1 ferredoxin-fold anticodon-binding domain protein; Swiss-Prot: sp|F4I1X0|HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41; TrEMBL-Plants: tr|I1L063|I1L063_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0280600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59720655..59723484) extracted from Lotus japonicus Gifu genome v1.2.
AAGACAGATGTCCTCTTTCGAGTGCAATCTTGTTTGAGTCGAGAACATCACATCATGGGACTAACTCTCCTAATGAGGTT TTTTCATCCACAAGATTCTAACTCAAAACCTTACTTAAGGGGAATCAAACATGTCCCTATATTGATTCAAACATAACAAA TTAGAATCAACTAACTAGGATTAAAAAAAAAAGTGGAATGAAGTAGCAATAACAAACAAATGGCTCCGTGAAAGGTGCTT TGTGAAAAGCAGGGTATTTGGAGGGACGCAATAAAGTTCTTCACTTTGGTTCATTACGATTCGTCAAATTGGGTTCTCAC TGTAAATCCTTTAGACCAATGCAATGCATTATTCTTGATCAAAACAACAATGGCTAGAATAGAACAAGAACAAGAAGAAG ATAGAGTAGACAATAATGATGAACTTGACATTGATGTCAATGATGATGATCATCATCAAGAGTCAGAGAAATGGAAGAAG CATTACTCATCAAAGCAGAGGATACTCCTTGTTGGAGAGGGTGACTTCTCCTTTTCTCTCTGTTTAGCCACTGCTTTTGG TTCTGCTCACAATCTCGTTGCAACTTCCCTTGATTCCCAGGGTCAGAACAAGTCTAACATTTTCTATTCATTTTCCTCTT TAGCTTCCTGAAAAAAGAAAAAAGATCAAAACTTGGAAATGCCCATTTGATTTTTTTTGGCAGAGAATCTTGCAAAGAAG TATAGTAATGGACTTAGCAATGTGAGGGAGCTTGAAGCAAAGGGTTGCCTTGTCCTTCATGGTGTTGATGCTAAGGACAT GTGCCAGCATTTCTTTCTCAAGACTCAGCGGTTCGATCGCATTGTCTATAACTTCCCTCATGTTGGGTTTCTTTACCCTG AGAATAGCTACTGCCAGATTCAGTAATGTTCCCTTACCTTTTCATCTCTTGTTTGTTTTGCTTAATTTTTTTTAATTTGA TGTTGCTTTACCTTTTTTGTCTTTTGTTAATGGTATTGCTGCTGCTTGAAGCCTGAATTAGGTTGTTCTGAGATTGTTTA AATGTCCATAAGTAACTTTTCTGTGACTGTAATGAACTTAAAAGTAGAGTTTAATCATATAATAGTGCAAGATAACTGCT AAAAGATTGGAAAAGAATAAGTCAATCAGAGTCAACTAATTATAATTGCCAGCAGCTTCCAGCTTTAGAGTCACACTTAT GCACAAGAATGCATAGTATAATTTGTTGCTATGATATGAGTTTTCTACTTCATATATCAAGGCATATATTAAGGCACGAG AGTATAGTGAAAAGAATTTAGTGTTTGTTTGGATACAAGTTCAGTGAAACGTGAATTGATTTTCATTTCAATCTATCGGA AGAGTTTCGTTCACTTTTTGCTTTGAAGTGCATGCTAACGTCCGTTTGCACTAATGTCAACAGATATCTTAACATAGTCA CTAATAGGTAGAAAGTACGAATGTGCGGAACTTGTAACAGAAATTACTCTAGACTCTACACATGCTTGGTAGCACTTAAT CTTAATCCTCTATTTAGTATCATCATACTTTGCACCTACTCAATTAGATTTCCCTTTAAACAAGGGGATTTTGGGTTCTG GAACTGGTATTTGATCATTATGCTGTCTTGCTAAACTTTGATTTATTTAAGATGACAAATGAGAATTTAGTGATACCTGC ATTCTTGCTGAGTTGCTTGATAGATAATAGACTAAGGAGTAAGGAGACATGCAAATATTTTGGTTTCATCTACTGAGCTA GTTACTGATGGATCTGAATTTGTGACAACCAAGCAGGTTGAACAAAAGGTTGGTGAAGGGATTCTTAGCAAATGCCAAAG TGTTGTTAAAGAAAGAGGGAGGGGAGATTCATGTAACACACAAGGAGGGTGATCCATACAACAAATGGGATCTGGTAAAG AAGGCAGAAAAAAAAGGGTTGGTCTTGCAACAAGTTGTGCCATTTTTCAAGGATGACTATCCTGGTTATGACAACAAGAG AGCCTATGGAAAATTATCTGATGCATCTTTTGCGCTCGGGGAATCTAGTACTTACAAGTTCAAGCTCCAAACACCTCCTT TACTCAGTAAATGATGAATGTTCTTACTTCTAAGTGTATGTTTGTTTGGAAGATCAAAATTATTTTATAGATATCCTCTC CCCCTAAGCTTTTATGTGCAAAAGAAAAATGTCAACAATCTTGGACTTGCATCTTTTTGTGGATATGGTGATCTATAAAT ACAGATGAATGGAGTTTAGTTAACTATCATGATTAATTTGTGACAGATTTTGGTTCAAAGATAGGTGCATATTTGGTTTC ACAGTTTGCATAGAATACAAGGCACGTTTATTCAAAAGCTAAGACTTGTAGGTTCAAATTAGAAGTGATTCTACAGCATT ATTCACCCTGAAACCAATGATGTAATGGATAGAAAATGAAAGAAAGAATGAGATTTTATTGATGAGGTTTCCCTTAATAC AAGTTGTCCTTAGAATCTCATGAGCCTGAGATCTGTCCCCCAAGGCCAAGACAGTTTTCTAACTAAAAGTCATGTTATCT TCTCGCCATATCTTTAGTCTTTCTTTCCCATATTTTGCTGGAACTCTATCCAACAACCATTAACTAATTTTTGCTCCTTT AACTAACAGAAACCAGCACAGTGGACTTACCTTGATTTTGCTTCACTTCACTGATGATGTTAACCGGTTGTAGTCTCATT TATTTAGCTCATGAACCTGGGTAGGAAAATGATTTAGTTTCAAAGGGTTAAGGGCCTTAATTCCTCGAAAGTCACCCAAT TCCTCTCTTCTTTTGTGAAATGAGTTTGAG
CDS sequence (LotjaGi6g1v0280600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGAATAGAACAAGAACAAGAAGAAGATAGAGTAGACAATAATGATGAACTTGACATTGATGTCAATGATGATGA TCATCATCAAGAGTCAGAGAAATGGAAGAAGCATTACTCATCAAAGCAGAGGATACTCCTTGTTGGAGAGGGTGACTTCT CCTTTTCTCTCTGTTTAGCCACTGCTTTTGGTTCTGCTCACAATCTCGTTGCAACTTCCCTTGATTCCCAGGAGAATCTT GCAAAGAAGTATAGTAATGGACTTAGCAATGTGAGGGAGCTTGAAGCAAAGGGTTGCCTTGTCCTTCATGGTGTTGATGC TAAGGACATGTGCCAGCATTTCTTTCTCAAGACTCAGCGGTTCGATCGCATTGTCTATAACTTCCCTCATGTTGGGTTTC TTTACCCTGAGAATAGCTACTGCCAGATTCAGTTGAACAAAAGGTTGGTGAAGGGATTCTTAGCAAATGCCAAAGTGTTG TTAAAGAAAGAGGGAGGGGAGATTCATGTAACACACAAGGAGGGTGATCCATACAACAAATGGGATCTGGTAAAGAAGGC AGAAAAAAAAGGGTTGGTCTTGCAACAAGTTGTGCCATTTTTCAAGGATGACTATCCTGGTTATGACAACAAGAGAGCCT ATGGAAAATTATCTGATGCATCTTTTGCGCTCGGGGAATCTAGTACTTACAAGTTCAAGCTCCAAACACCTCCTTTACTC AGTAAATGA
Protein sequence (LotjaGi6g1v0280600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARIEQEQEEDRVDNNDELDIDVNDDDHHQESEKWKKHYSSKQRILLVGEGDFSFSLCLATAFGSAHNLVATSLDSQENL AKKYSNGLSNVRELEAKGCLVLHGVDAKDMCQHFFLKTQRFDRIVYNFPHVGFLYPENSYCQIQLNKRLVKGFLANAKVL LKKEGGEIHVTHKEGDPYNKWDLVKKAEKKGLVLQQVVPFFKDDYPGYDNKRAYGKLSDASFALGESSTYKFKLQTPPLL SK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 34 | 34 | - | – | |
| PANTHER | 14 | 236 | 223 | 1.2E-98 | – | |
| PANTHER | 14 | 236 | 223 | 1.2E-98 | – | |
| SUPERFAMILY | 41 | 204 | 164 | 7.39E-5 | ||
| Pfam | 46 | 212 | 167 | 9.0E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0280600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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