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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0281900 |
| Transcript ID | LotjaGi6g1v0281900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | U-box domain-containing protein; TAIR: AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33; TrEMBL-Plants: tr|I3S183|I3S183_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0281900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:59816719..59825339) extracted from Lotus japonicus Gifu genome v1.2.
CATTTTCTATCTATTTCTCTTTTATCTATCAAACGAATCATCTATCGTATATTTACTTTTTCTCTCATTTTATCCTATCT CTCCCTTCTTCCACCTCCACCTCTTCACACCTCAAAACTAAGGTGGGAAGAGATGATTATTCATCTAAAATATCTATCTT ATGTTTCAGATTCCGGTCCTCTTATTCTGAAGACAAAAATGAAAGTCAAAGTTGATGTTTGTTGAAACTCTGAATTTCCT CGTCCCTGATCCACATGCGGCACTTTTCCTTTCCTCAATTTTTCAAGACTAAGCTGATCAAGCCGTGTTATTATACAACT ACTATCTTTGTATTCTTCACAATCAATTCTATTAGCTACAAATAAGTTACTCATAATTTTTATTTATTTATAGAATCGAT TATATAATGATTTACTTAACTAGTCCATACACTATACCTCTACCTTTCATTTTTGTTAGCAGAAAATAGAATAGAGCATA GTTTCTTTCACTTGTCTTTTCATTTACACTTTCAACAACCCACACAACAAGTTCTTCTTTTCCTCAACCAACTATTCTTA CCCTTCATCTAAAAACCATAAATACAACTAGTATTCAGTATTCACTTGCACAAAAAACCACAATATACAAGCCTGCAATG TTAACTGAGACCTTGCACCATTCAGATGAAGTTGTGACCATGGACAACTCCCACCACTACTACAGCCAAGGCAGCACCAC CACCACCACTGTGAGTGAGATAGAGGAAGAGTGCTCCACCCAGTTGCACTTGAATGATGGTCCTATGACAACAATTAGTG AAGAGAAGGAGAAGGAGGGAGAAGAAGAAGAGCCTGTTTATGTGGCAGTGGGTAAGAGCCAGACTAGCATGGAAGCTCTG TCATGGACCCTCAACAATTTGGTTACTCCATCTACTACACTCTATCTCATACATGTTTTCCCAGAGATCAAGCATATTCC CAATCCTTGTAAGTTTTCTTCCAATTACCCCATCACATAAATTTTCCATTTTTCTGTTATTTTCTTGCTCTGATCACACC CTGGGGCCTGGGCCTAACTGTGACTGTGAGGTTGAAATCTTAACCACCATGTTATTTTTAGACCATAAAAATGTTATCTT TATTGCCTCTAATGATCTAGGGATATAGAAAATGGTTGCAAGTTCGATTCAAGGGAAAATACTTCAATTCAGTTAGCAAG CACTTCTTTAAATTTCTTTAACTTTTTCTTGAGAATTTGGTTTTCTGGTTTCTTCACTTCAATCCATGAACAATTTTGAG GTCCTAAGATGATCCAACAGTCAACAAAGGATGACTAAAGATGGATGTGAAGTCTTAGCTTGGACAAAGATAGGGTCATA CCTAATACAATTATTAAAAGTCCAAAATGTAAAATTCAAGGGCTAAAAGTCAAAACCCACAAGTAGGATTATTAGGATCA CTGTTTTTCCTTTTCTAAATGCAAATGCTGATTTTCTCAAGTTGAAAGTAAAATGCTATTTCTAATTAACCAATTTCTCC ATATGGGCCTGTTCTCTAGTGAATGTGTGCTTTCACTGTGTTTGTGTGATGACAGTGGGAGTGGGAATGGTTCCAAAGGA CCAAGTGAGTACTGAGCAAGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGGAGGGAGCTTCTACACAAGTTCATCC AATTATGCTCTGCTTCCAAGGTACTAATTCTAGTATTATAATATAAGTACTTCAAATCTATTTTCCAATTTCACCCAAAA CCAAGAGATGAAGTGACAAAAGTATCAAACAGGTTAAGGTGGACACCATTCTGATTGAGAGTGACTTGATTGCAAAGGCT ATCATTGATCTCATTCCCATTCTTCAAATAAGAAAACTTGTGATTGGAACAAACAAATCCCAATTAAGGTAAACTAAAAT CCCTTACTACTAGTGCATCTAAGTAGAATTTTAGTTTGGGCCTATATCAGTTTTGTCATAAATGAACCACTAACATAATA ATGTTTGAGCAGAAAACTAAGGTCTAAGAAAGGGAACAGCATGGCTGATCAGATACTTCAGAATGCACCAGAAAGTTGCA AGGTAAGAATTATATGTGAAGGGGAGGAAGTAAATCAACAGACAGCTAATGATACTTCAATGTCCCACAAAGAAGAAGAC CAGAAAAATGATTGGTTTTCATCACTTTCATGTATTTGCTTTTGACTTTGGAGCCTAATTTGTCAGAACAATGAGTGTGT AATGTGAATTGCAGCACAAGGGATGGCTACCTCATTGAATATTAGTTTTAGATTTTAGGCTATGAAAGATCAATAGTGTA GATGAAAATGAAGTGCTTGAAATTAACCAGAATAAGCTTTTCATACAACATCATCAGTTTATGATTTGCTTGGGCTGCCA ATAATTTTAGTTTAAGGTAGTCCTCATCTGTTATCTATTATTGTAATACACTAAATTTGAAGAGCAAAGACAAAGTGTTG TCACTTCAATCATTCGTTTCTGGCACGTTAAGAAACTATAAACCTTAAACATATAAATACATATATCATTTTGTTAGATT TATGATGATAATAATAACATCATTACATATAATTTAGGGGGAGGGTCCACTTAGTTTGATAATTTTTTCCTGCTCTTAAG GTTTGAGCATATACTAAAAATATTTAAAGCATATCAATGACTCACCTGAGCTGCAATCAAAAAGAAGCGTCCATTGATGA TAACCAGATCTCATTTCTAATCACAAACTTTCCCTCAAATCAACTTTTTTTTTAATGCATTTGGGTATAACCTTTTCTGA GATAGACTTGTCATTGGGTTTGATAATAGTAAAACATTCATACAGGACATGAATAAGAGAAGTGATGTTAACATAAAGAA TGCATTTTGAATAAAGTTTTGGTCTGCAAAGTTTTTTTATTTATCATTCAACATCGATGGCTTTATAATTAATATAATAA CATTTATTTGCACATATCACTTTCTTAATATTATTTATTTATGCAATTATTCTCTCCATATCACTTTCTTTAATTTTGTT AAATAAAACTTTGTCTGTACCCTTTTGTAGTTTTGTTTGTACACACAAATACGTCCTATATTTTTTTAGCATTTAAAATA CATGAATACTCAAATTGCGGAAGTTTCGTCTTAGTTACACTTACATGATGAAACTCCAATCCAATCAACTCCAAAATCCT GGTCATTTTCTCTTGATCACAAAGTTCATGTGTGTGTTTGAATACCAATGTGAATAGACTTTCATCCCGGTTCATAAGAG AGTTTTGTTGACTTTTTATTTTAAAGTAAGTGTTAACGTCAGTTTGCACCGGTGCGAGCCTGAATCCAAAATAGCCTACA ACTTCATAGGAGAAACCAAGTTGATAGAAACTTGGACACAACAATAGCATGTCAATATTGTCAGGGAAAATGGGGCAAGA CTGTTTGCACTATGATTCCCATGAAGAAACATCCAGTTGCACTTGTTTTCTCATTGGGTTCAGGAGAAAAAACCAAGTGT TAAATTACAGCCATAGCAGCAGCACCAGTGAGATAGGCAACAAGGATTCAGAGGAGCTGTTTGAGATCAATCTGGAGGAG CCATTGGATACAATATCAGAAGACTGTGAGAGCAGTGTGTTCTCTTTTGATATTCACAATGAGAAAGACATTGTTTATGT GGCAGTAGGCCAAGCTGGAGAATCAAGCATGGAAGCGCTTTTGTGGACTTTGAAACATGCTGTCACACCCTCTACCACTG TCTGTTTCATACACGTTTTTCCTGAAATCAGGCTCATTCCAACTCCATGTGAGTCAAGTTCTTCTATTTTTACCCACTTT GTCCTTCTCCTCCTCTGTTCCTATATCAGATGATTGTAAACTTCCACTCCGTCCGTTCGTGATTATAAGACCCCATAAGT TGGAAAAGCTTTTTTCTAAGACTAAGCTCCGTTTGGAAAAACTTATTTGAGCTTATCTTATAGTATAAATGCTTATGAAG TGTTTGGAAGAATATATTTAAATAGCTTATGGTCAAGCTATAAGTTGTTTTAAGCTTATTTTCAAAAACTGTTTAGATTA GCTTATGAATAAGAGTTTATACTTACCTAAAACGGTAATACCTATTATCAGCTTATAATAGGCGATTATGCGATAAGCGC TTATGTGATTATGTCAATGTTTATCGTATAAGATTAGCTCAAATAAGCTCTTCCAAACAACCTTAGGGTTTCGGTCAACA ACTTAATTAAGCGCTTATGACTTATCTAAAAGTTGTTTTGAGTTTATATTAACCTTCCTTAACTTACGAATAAGCGTTCA TGGATATATAAGCCCATAACGCCCATAACTTTTGTTGAGCTTATTTCAACAGGCTTCTCACGTAAAAGTTTAATTTGTTT AAACACACCATAAGTCCTAGTATAACTGCATGTTTAGATTTCACCTTTAAACCTTATAGAAATACTTCTCCCCTGCAAAA ACTACTCCTATACAACTGCTGAAGTTAATAAAAAATGAGGAATAGAAAAGTTTTATTGGCTTCTCATACAAAATTTCTCA CAACTTACTCATTTAGCTATGGCTTTGGGTGCTTCATCCTATTGTTTTTTAATGTTTAATGGCAGTTGGAAAAATTCCAA GGAATCTTGTAGATCCAGAGTATGTTAATTTTCACTTAACTCAAGAGAAAGGCAAGAAGAAAGAGCTCCTTCAAAGGTTC ATTGACTTGTGCACTGATTCAAAGGTACATAAATCACAGCTGAGAAATAATAAAGCCCATGACACGAGTTTATTTGGACA ATCACTAGTCACTAGGCTTTTTGATGTGGTAGTTGAAGATTAAAAAATAATAATGAAATTCAGGTTAAGGTGGAGATCAT GCTCACTGAAGGTGACAACATTTCCAAAGCCATCGTGGACCTTGTTAGGAATCTTGGTATAAGGAAATTGGTGATTGGAA CTAGCAAATCTAATTTAAGGTACCAAGCCCTGCAAAATCTGAAATAAATATAAATTAGTGCATGTTTGTAAATCATTCTA TAATTGATTATAAGGTCAGTATCAATTCTGAAGATAAGTTTCTGTGAGTAGCTTCTTAGTTTCAGAATTGATTCTGATGA AAGAAAGTTGATCTAAACATGTTATTAATAACAATAGTGTATTATTAACCTGTCAGTAATTTTGTTTTTGGGATTTGCAG TAAGTATGTCTCTAGAAGGAGAAATGTCATAGCAGATAAGGTCCTAAAGAATGCCCCAGAAATATGTGATGTTAAAATTA TATGCGATGGAAAGGAAGTGATTGATCAAATGATTGTTAGCTCTTCATATTTATGCCCAAGTTCTGGTAGAAGTTCCAGA GTTTCACTAGAAGAAGCTAAATCCCATGGCTTTGTTCAATCGTTGCGTTTTATGCCAAATACTGCATGGTTATCTAGATT CTAGACCCAGATTTTAATAAACAATATCAGTAGAGATTGAATATGTATAAGAAGACTTCAAATATGGTTGATCCGATTGT TAGACTTGGTTAGTGCAGGTCTTAGACAATAATGCATTAGTCATATATGAATGTTTTTTATAAACAAAAAGGATCTTTAT CTATTTGGGATGAATGGGATGATCTTTATAGTAGTTTTAGTGGTTGAAGACTTTGCATATATGTGCTCAATGTGAAAAGA ACACAGAGAACAGGTTTTGAATGTATGAAACTTACTAGATGGAAAGATATTTTTGTAAACAGCCTGCAGCTTAATTGTTA ATTTGTTAGTTGATCTATGATGAACGACATGTTCAAAATCAACATGCTTATGATGGTTCACCGGTGGACCACTTTTAAAA TGGTATATCAAACGACCCAAATTAAAATGGTCAGATACTCAATAGTAGTATTTTTCCACTTGCACCGTCTACTGTTGACG CTACCACCCTCAAACATCACTTGACACCCTTTGTCCTATCACCACCATTACCAGACAATATCCACCTCTACCATAGCTTA ACACCTTCAACCGTTGTTGACAATACCATAGCTTGGCACCTTCCACCATTGTTGTCATTGTAGATACCCTTGTCCACCAT TGTTGTCATTGTAGATACCCTTGTCCACCATTGTTGTCATTGTAGATACCCTTGTCCACCATTGACACTCTTCACCATAG CCCAGCCACCTTACATATGGATAATTTAATTACTTACATGTGATTTGCATTCACGGTTTCTAGTGTGCATCAAATATTAA ATAAACTAAATATGTATCATGTTTATACCCTATCATAATCTCATCTTTCCACCAAACAAGCTGTTGGTATCAAAATATTG TAATGCATTACATTTGTCCATTTGAGGAAATTTTGTGAAGAGAAGATCACAACACAACCCTCCTCTCCTGCATGTGCATC TATAACGTCCATGAGTGTTGAGCTTCTCAAATGAACACTCAAAGAAAGATAAATCTTATTAAACCATATTGTCATGATTA AAACACAAACTAGTGTGTATTTTAATTGATTTTGGGTTCAGATGCTCCACTTTCTAATGTTGACAATGCGTACAGGCCAT GGTTCAGTCCTTATGCCAACAAAGGTCCTTATTTTCCATGACGTGACAATGTTGTTGTTTTCATCATACAATGTGGAGAA AAGTAGATTCATGCCTTTGAGATGACAGAAGCCATGCATTAATAATGCCATACAAATCTGAAACTGCAAATAGCCAACAA AAACAAACATACAATTCCTCATCATCTGTTCCTGAAACATTGAAAAACAGTTCCTCCCCTCTAACAGATCAAACCATTTG TAATCAATATTGTCTATCTAGAAGAAATCGAACTCCAGATAATTATCAGAGCCTTTCTGATTTGCTGGCGGCATATTGCT AACAGCCTTTTCGCCAGTTGATGAGGCTGGGGAAGGTATCTTCTCAAACTCTACAGCCTTTGGGATCTCAGGTGGGGTAG CACAACGGATCAATGCCCAATTCACACCTTCAAAAAAGGGATGTTGCTTAATCTCAGTAGCGCCTCTTTTATATGCCAAT CTGTGCTGTGGTTCCTTTACAAGCAGCCCCCTTATAAGATCCCTTGCTGCAAAACTGACAACAGGTGCTTCTGGGAACCG CAAGGGTTGGCCTACAACATTAAACAACGTCGCTCGGTTCCCCGATCCCTTAAAAGGAGTTTTACCAAACAACAGCTCAT ATAGAAAGATTCCAAAAGTCCACCAATCAACTGCACTCCCATGACCTTCACCCTTAATGATCTCAGGTGCCAAGTATTCA TGTGTTCCAACAAATGACATGGACCGAGCATCGGTAGGCTCGGCAATGAGTTCCGGTAATGGGCTCACCTGGTTGCCTAT TTCGTTTTTAGGCTTCCGGTCCTTCTTTGATTTGCTAGAAAAGAGACGAGGTGAAAAGCATGAAGTAGGAGCAACACAGG AAGGCTGGATGCAAGAAGGCGGCTCAATACATGCAGGCTGAACACAATAAGCAGAATTCTTTCTTAAAGGCTCAGAATCT ATGGATGAGGATTTAACGAGGGTTGGGCTAACAGCACATCGGAGGGAAAGATCAAAGTCAGAAAGCATAATATGTCCATC ATCCCTAACAAGGACATTTTCAGGCTTAAGGTCACGGTAGACAATCCCAAGCATGTGGAGGTACTCCATAGCCAGTAGGA CCTCTGCCACATAAAATCTGCAAGTTACAACGAAATTAGCAGTTGTTACCATCAAATCAAATTAATAAAAATACCCAGAA ATAAAGAAACAGGAAAAGAAACCATGATTCAACTTAAGAAGTATCAAACATTGTGAGTGGACCCTCTCATATTGTAACTT CACATGACCTCACATTTTAAACTTTTAAGCCTTTCTCTCTATTCATTTATATTAAAAAGATGGGGCCCTATCAAAACTTG TGAATATTTATAAAGAGATAGACAATATTTACATAGCCATGTCAAGTGAAAAATCAATTTCAGAGGGATCCGTTCACACG AAACGTCTCCCTTCCCGCAGCCAGACTTTTTAAGAAATAAAAGAGGCTAAGGAAATAAGGAATCCAAGCATGACAAAAAA TTCATCTACATGGATAGATTATCCCAGCAAAAGAAACAAAACAGATGCCTTGTTGTTATAAGATAACTGACAATTAAGAT TTCCACTTAATTTACCATTCCACAGACAAGCTTCCGAAGATTTTCTTTTCCTCTGGTTGAGATTATGTATTAGTTTGGAC ATTCAGACAAAATGAAGGAGTCATCAACCTCAAAAAACAATTTGATATCTGAAATTGTCGGGAGTTCATTACTTCACCTC ATATAAGATTTAAAAAAAAAAAACCAGAGGCATGATAAGCAGACCATAGTAGTCAATAGCGGCAAATAGCGGCGCTATAG CGGCGTAGCGGAGCGGAGCGGCTCCCTGCCGCTATTGAGATGAAATAGCGGCCAACTTCACAATAGCGGTCATAGCGGCG CGAATAGCGGCCAAAATAGCGGCAGATCGCGGCCAATAGCGGGAAATAGCGGCGCTATATGAACGAAGGAGAAAATGACT CAAGCCCCTTCGTTTTAAATCGTTGGGGAACCTTTTTATGGGCATGTTAGGACTTCTCAGG
CDS sequence (LotjaGi6g1v0281900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAACTGAGACCTTGCACCATTCAGATGAAGTTGTGACCATGGACAACTCCCACCACTACTACAGCCAAGGCAGCAC CACCACCACCACTGTGAGTGAGATAGAGGAAGAGTGCTCCACCCAGTTGCACTTGAATGATGGTCCTATGACAACAATTA GTGAAGAGAAGGAGAAGGAGGGAGAAGAAGAAGAGCCTGTTTATGTGGCAGTGGGTAAGAGCCAGACTAGCATGGAAGCT CTGTCATGGACCCTCAACAATTTGGTTACTCCATCTACTACACTCTATCTCATACATGTTTTCCCAGAGATCAAGCATAT TCCCAATCCTTTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTACTGAGCAAGTGGAGAGCTATATGGCCCAAGAAA GAGGTAAGAGGAGGGAGCTTCTACACAAGTTCATCCAATTATGCTCTGCTTCCAAGGTTAAGGTGGACACCATTCTGATT GAGAGTGACTTGATTGCAAAGGCTATCATTGATCTCATTCCCATTCTTCAAATAAGAAAACTTGTGATTGGAACAAACAA ATCCCAATTAAGAAAACTAAGGTCTAAGAAAGGGAACAGCATGGCTGATCAGATACTTCAGAATGCACCAGAAAGTTGCA AGGTAAGAATTATATGTGAAGGGGAGGAAGTAAATCAACAGACAGCTAATGATACTTCAATGTCCCACAAAGAAGAAGAC CAGAAAAATGATTGGTTTTCATCACTTTCATGTATTTGCTTTTGA
Protein sequence (LotjaGi6g1v0281900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTETLHHSDEVVTMDNSHHYYSQGSTTTTTVSEIEEECSTQLHLNDGPMTTISEEKEKEGEEEEPVYVAVGKSQTSMEA LSWTLNNLVTPSTTLYLIHVFPEIKHIPNPLGVGMVPKDQVSTEQVESYMAQERGKRRELLHKFIQLCSASKVKVDTILI ESDLIAKAIIDLIPILQIRKLVIGTNKSQLRKLRSKKGNSMADQILQNAPESCKVRIICEGEEVNQQTANDTSMSHKEED QKNDWFSSLSCICF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 242 | 230 | 2.2E-95 | – | |
| PANTHER | 13 | 242 | 230 | 2.2E-95 | – | |
| Gene3D | 51 | 218 | 168 | 2.1E-12 | ||
| CDD | 66 | 221 | 156 | 6.34475E-31 | – | |
| SUPERFAMILY | 67 | 210 | 144 | 2.93E-12 | – | |
| Pfam | 67 | 210 | 144 | 2.2E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0281900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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