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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0286100 |
| Transcript ID | LotjaGi6g1v0286100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-binding protein 39, putative, expressed; TAIR: AT5G47540.1 Mo25 family protein; Swiss-Prot: sp|Q9FGK3|MO25N_ARATH Putative MO25-like protein At5g47540; TrEMBL-Plants: tr|G7IP83|G7IP83_MEDTR Calcium-binding protein; Found in the gene: LotjaGi6g1v0286100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60346525..60352084) extracted from Lotus japonicus Gifu genome v1.2.
TGACAAGTTGAATCTTGTAACAGATAGATCGTATCAGGAATGCATATTCAGTGTGGATTATCCTCTCGTTCCATCACCAT ATGATTTTTCCGTAAAATTCGGAAGCAAAAATAAGATCAATAATTCACAAAAAAAAAAAAAACCAAAAACTCACCCCTCT CCTTCTCCTTCTCCTTCTCCTCCTTCTCCCAATTCCACGAGAATCAGAAACCCTAACCGGTCTGTGGGACTCGAAGAAGA AGAAGAAGAAGATGAAGGGTCTCTTCAAGCCCAAGCCACGCACTCCTGTTGAAATCGTGCGCCAGACCAGAGATCTTCTC CTCTTCTTCGATCGTCCTCCCGAAACCCGCGAAACCAAGCGCGAAGAAAAGGTTCCCTGTTTATCTCTTCATTCCTGCAT TTTTTTCGAAAATTTCATTTCCATGATTGTGATCTTGTCCAGCTCTATGCGTTTGTGTATGGCGTTGCATTGAGTTTCTG ATGCTTGATTCGTGAATCACAATAATCTCTCCTCTGTGCTGTTTATGATGCTTTTTGTAAACATTTCTCTTATAGCATGT TTATGATTTTTTCTACAATTGATTTCAAATCAAAATCAATTACGTGAAGAAGCTTCGCTAAGTAGCTTGTGTGTGCGAGA ATTGATTATGGGAAAAAAGTAAGCTGATCCGAACATGATATTAGTGTTGTGCCAGAATTGATTATGAGAAAAAAAGTAAG CTGATCCAAACATGATATTAGTTTTGGGCTTGTGCAGTTAATGGCTCTAGTAGGCAATACACTCTCCTCTGTGTTGTGAT GCTTTTTTTAAATATTTTTCTTATAGCATATTTAGAAATTTTTCTACAATTGATTTTAAATCAAATTCAATTACGTGAAG AAGCTTCTCTAATTCGCTAAGTAGCTTGTGGGTGCGAGAATTGATTATGGGTAAAAAGTTAGCTGATCCAAACATGATAT CAGTGGTGTGCCTTATCAGAACAGTTATCTATTGCCAATTTGCAATTAGTTTTGGGTTTGTGCAGTTAATGGCTCTAGTA GGCTGTAATTTGTTTTAAATATTTCAATTTTTGGTTGTTCTTTTATCATACTTTATCATTGCAGTTTCCTTCTTGTTATC CATCTGAAATTTTCAGTGTAAATTCTGTTTGTGTCTTTGGTTTTGCAAGGAAAACTTAAACTAGCATGTAGGTGACTAGG TGTAATCGTGCTTGACATGCCATCGGGTATCATATAGGGCAGTAAGAAAGTAAAACTTGTGTAAGCAAAAATAAAACAGC AAGAGCTATAAGGCAAACAAATCATTTAGAGAGGTTTAGAAGTGAATGATCTATTTATGAGCTTATACATGACAGGGCAC TATGGTGTAAGATGATACATGTATGTAACCAACCCCACTTAGTGACGTTCAAAAAAAAAAAACCCACTTAGTGAGAATAG ACTTAGTTGTTGTAAAAATGAAACGGCTGGAATCAATTCTATTTAGTCATTTTATATGATCTTGACTGTGTATGACAGCA ATGTCGCCCATTCTTACTGGATGTATGTTTAATATGTTCTTGTGATGCATCTAACAGCAAATGTCCGAGCTGTGTAAAAA TATCAGGGAGCTAAAGTCAATCCTTTATGGAAATAGTGAATCTGAACCAGTTTCAGAAGCTTGTGCACAATTGACTCAGG AATTCTTCCAAGAGAACGTGCTCCCACTGCTTATCAAATTTCTTCCAAAATTGAATTTGGAGGTAATAAGGAATTTAATT AGAGAGCCCCATATATTTGCAATTCAATAAGCATGATATTAGATTTACTTGTAGCCTTTGTGGACGGGTATGCTTGATAG GATTTTAGCATTCTTGCATCATCTGGGTGAGGGTTGGAACTTGGAATGGCATATGAATATTTATCTCGGTTCTGTACTGT GGTTATTTTGTATTTGCTAATGTTTAGAGTTGAGACTATATCTTTTGCAGGCCAGAAAAGATGCCACTCAAGTGGTTGCA AATTTACAAAGGCAACCGGTTCAGTCTAAGTTGATTGCATCTGATTTCCTGGAGAAAAATATAGATCTTTTGGATATTTT GATACTTGGGTAAGAAATCATTGGATCAATATGTTGGTTGCTTGGTGTTTGTGTTGAAACCAGTGTGGTGGACTCTTCTG CTGGATCTAGTGAATGGAAATATAAAATTTATTTTCTTACCAAGTGTCAAGACATGATTATCCCATTCCCCTGATTACCA GATTTTATGATTTTTAGCTCAAATTTAGTTTTGTCTCGTGTGTTTTGTTCATATCTTGATTTGCTGTGTTTTGGATTTCA TATGTTTCTTACTGTGCTTGTCACTAGATGATGCTTTAACTTGTATTGATTCTAGTATACAATTGACTAACTGATGCCAT TTTTAGCTATGAAAACACAGATATGGCTTTACACTACGGCGCAATGCTGAGGGAGTGCATAAGACACCAGATTGTTGCAC AGTAAGGAAAATTAAGCTGATAAATTCATTGTGTTATTTTTTCATAAATCGTACTATCAAGTTTTCAGCTTGTAATGATG ACTGCTAGAACCACAATCCTTATGGTCAGTGCTGTGATCTATGTTGTAGAATAGTATAACATCTTCTGGTCATATATAGG CACCTTTAGTTCATATAATTCCACTTAATTGTACCTCTGAGGGATATGTCGTAAATGAGAAGGGTGCTGTATTATTGAAG TGAAAATGGCCTAGGTGTGGAACATTTTTCTCCACCTCTACTGATACCGTAATTGCTCGTGTTTTTATATCAGATATGTT CTGAACTCACCTCATATGAAGAAGTTTTTCGACTATATTCAACTTCCTAATTTCGACATAGCTGCAGATGCTGCAGCAAC TTTTAAGGTGGGTTTCATCGGAAAGAATTTTATGATCACTGTTTCGTTATTTTGTGCCAAACACATTTTTGCAGCAGAGT CAATGTTTTATAGTTTTATTTTTTTTCAGGAACTCTTGACAAGACATAAATCCACTGTAGCTGCATTCCTTTCTACTAAT TATGAATGGGTAGGTTCATCATCAACCTAAGTATAAAGTAGCATCACAATTTTAATACATACACTGTCTATTGACATCAC ATTCACACCTATTTTCTTATCCTTAAATTCTTTTGTTGCTTAACATGCCTGAATTTGTTTCCTTTATTGATAAAGGTTCT TTCCTATATATGAGCTTGTAATTTGTTGCTTATTGAGCATGAGCTAAATCAAGATTTTAGTTTTGTAATGAATTTTGGAC GGAATTACATTATGATATCTGAGAAAAAGAATTTTATAACCTCCTTTTCTGGTTATTATTTTAATTTTTTTTTCTTTCCA TTCATCTGGTGTGGTCCTATACTCCTATTAGATCTATAGTTTTTGTTTCTTTACTTTTAAATGTAGATTTCTGATACAGA TAAGAATATCCACTTTTGGAAATTGATTCTTCAATGGATGTACACATTTTCTATTAGATATATTCGTATTTTTTTATTCT GGTTATTAACCTCTCATTTTCTTTCTTAACTATTATCAAACACGCGCTTTTAATTTTTCCTTGTCTAGGAATAAAGATTT AGAATATTACTAGTGGATTTATTTTGAAAGTTTCTGCTGCTTGCGTACAATCATTTGGTTGTCAGTTCATCTTAATGTGT TCTATTGTATCTGGTTTATTTAATAAGTTATATGTCAATTACTTATCAACTACTCTCTAACTTCGCTGCGGCCGGTTTCA GTTTTTTGCAGAATATAACTCTAAGCTGTTGGAGTCTACCAATTATATTACCAGGCGCCAAGCTGTCAAGGTGCTATATA AATTGAGCTTTTTATCTTAATTGTAACTTGCTAATTCGTAAGAAAACTGAATGAAGCAACCATACTGGGCATTAGAAATT CTCCCTGTCAAAAACTTTGAGTTTGAGAAATATTTGCTTGTTTGCCTGCAAATTGTTTGACCTTATGTTATTGAAAAATA AAATATCCATCACAACTATTCAACAATTATGTTGCTAGTGCAATGATTTCTTTTGTTTTCCATGTGACGTTTGGTTGTTG GTCCTTGCAGTTTTATGTTATAATTAATATGTCAATGATGAATGAACTATTATCGCAATTTTTATTTTGTTGTTTCATGT TATGGTGATGTATAGATAACTGCTAAGTCGATTCCTTTCTCTTTCAGTTGTTGGGAGATATGTTACTTGATCGTTCAAAT TCAGCTGTAATGACTCGATATGTGAGCTCAAGAGACAACATGAGGATTTTGATGAATCTTCTACGAGTATGGTCTTTCAA AAATTTATATAAAGCTTAATGACATGAATTATTACTTATCTTTGATGTGTTCCTTTCCTCTACCCTTTTGCTGTTTTTAC TTTAGCATGTGAAAGTGCATTAGTTCCATCAAAATATATAGCGCTTGAACCTCTTATTACGAATTTACAGTTACAGCTTG TCCAAGCATCAAAATTTAGAAAACTGAACACTTAAGCTCAAGTTTTGTTTCTGATGAAAATTAAGAACTCAAGATAGATG TGTGAAAGTGACCATTTAATGGGTCATTGCGGGTTTCTTTCTGCAGGAGTCCAGCAAGAGCATACAGCTAGAAGCATTTC ATGTTTTCAAGGTACTTTAATTATATGGCAGCACGCATTTGGAACCTGATTATTCTTAACCAGTGCCGGCCCGTTACTGA TATTTGCTTGTCCAAACAGCTATTTGCTGCTAACCAAAATAAACCAGCTGATATTGTGGGCATACTCGTTGCAAACAAAA GCAAGATTCTGAGACTTTTGGACGATTTCAAAATCGATAAAGGTAAGTGATGCCATCATTAGTAGGTGCTGTTATGGTGA TTGTGCAGAGGATGAACAGTTTGAAGCTGACTAAGCTCCCATGATCACATATTTGTTTTGATTTTGCAGAGGATGAACAG TTTGAAGCTGATAAAGCTCAAGTGATGGAGGAAATTGCTGCTCTTGAACTTAGGGAATAACCTGTCTGAGCTGCAAGTGC AGAGTTGCAATGTGGCATTTCACTTTAGTGAACTGTGTATTGTAGTAGTTCTGTTAGTCTTCTTCATCAAGATGAGACTA TTACTTCATACAGATTTGGATGCTTTTATTCTGTAATTTTATAACCTTCCTGTAAAATATTAGATAAATAAATTGCTTAC ACGCGGTCCATGGTTTTCCAGGTATTAGAAAGCAATAAAGCATTCCTTTCTGCCACGTGAGTTATAAATTATATGCAGTA ATCTGACCTTCACAAATATGTTTGACTAATATTTTCTACTTATGTATGGTGCCTTCTACTGCTACCACTAGCCGCTAAAC TAGTTTCCCTCCTACCGCTTAGATTTTTGCTAGAAGATCGTCACTTTGATGAACTTTCAGTAGCGAGTGATGATTTATTT ACATAAATTTTCTCTTTTATTTCATTTTCACTAACTTTTTTATCCGATATTTTTCTGGGATCTAAATAGTATTCTTCAGT AGCTTTTTTAAGGCTTCTCATGAGCAACAATAGAGCAGTC
CDS sequence (LotjaGi6g1v0286100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTCTCTTCAAGCCCAAGCCACGCACTCCTGTTGAAATCGTGCGCCAGACCAGAGATCTTCTCCTCTTCTTCGA TCGTCCTCCCGAAACCCGCGAAACCAAGCGCGAAGAAAAGCAAATGTCCGAGCTGTGTAAAAATATCAGGGAGCTAAAGT CAATCCTTTATGGAAATAGTGAATCTGAACCAGTTTCAGAAGCTTGTGCACAATTGACTCAGGAATTCTTCCAAGAGAAC GTGCTCCCACTGCTTATCAAATTTCTTCCAAAATTGAATTTGGAGGCCAGAAAAGATGCCACTCAAGTGGTTGCAAATTT ACAAAGGCAACCGGTTCAGTCTAAGTTGATTGCATCTGATTTCCTGGAGAAAAATATAGATCTTTTGGATATTTTGATAC TTGGCTATGAAAACACAGATATGGCTTTACACTACGGCGCAATGCTGAGGGAGTGCATAAGACACCAGATTGTTGCACAA TATGTTCTGAACTCACCTCATATGAAGAAGTTTTTCGACTATATTCAACTTCCTAATTTCGACATAGCTGCAGATGCTGC AGCAACTTTTAAGGAACTCTTGACAAGACATAAATCCACTGTAGCTGCATTCCTTTCTACTAATTATGAATGGTTTTTTG CAGAATATAACTCTAAGCTGTTGGAGTCTACCAATTATATTACCAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATGTTA CTTGATCGTTCAAATTCAGCTGTAATGACTCGATATGTGAGCTCAAGAGACAACATGAGGATTTTGATGAATCTTCTACG AGAGTCCAGCAAGAGCATACAGCTAGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAAAATAAACCAGCTGATA TTGTGGGCATACTCGTTGCAAACAAAAGCAAGATTCTGAGACTTTTGGACGATTTCAAAATCGATAAAGAGGATGAACAG TTTGAAGCTGATAAAGCTCAAGTGATGGAGGAAATTGCTGCTCTTGAACTTAGGGAATAA
Protein sequence (LotjaGi6g1v0286100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGLFKPKPRTPVEIVRQTRDLLLFFDRPPETRETKREEKQMSELCKNIRELKSILYGNSESEPVSEACAQLTQEFFQEN VLPLLIKFLPKLNLEARKDATQVVANLQRQPVQSKLIASDFLEKNIDLLDILILGYENTDMALHYGAMLRECIRHQIVAQ YVLNSPHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAAFLSTNYEWFFAEYNSKLLESTNYITRRQAVKLLGDML LDRSNSAVMTRYVSSRDNMRILMNLLRESSKSIQLEAFHVFKLFAANQNKPADIVGILVANKSKILRLLDDFKIDKEDEQ FEADKAQVMEEIAALELRE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 336 | 335 | 3.8E-205 | – | |
| PANTHER | 2 | 336 | 335 | 3.8E-205 | ||
| Gene3D | 3 | 335 | 333 | 1.3E-129 | ||
| Pfam | 4 | 335 | 332 | 7.4E-120 | ||
| SUPERFAMILY | 10 | 335 | 326 | 4.99E-106 | ||
| Coils | 318 | 338 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0286100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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