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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0291400 |
| Transcript ID | LotjaGi6g1v0291400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT1G17930.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|Q9LMT7|MAIN_ARATH Protein MAINTENANCE OF MERISTEMS; TrEMBL-Plants: tr|A0A0S3RPZ5|A0A0S3RPZ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0291400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60935473..60937203) extracted from Lotus japonicus Gifu genome v1.2.
AGCAACATAAGAGGGTATCGTCTGAAGAGTTGGCCGATCGTCATGCCTATCTCCACGCTTCTCATAGGCGAGGTGATCAT GATACAGATGTGTCGACTTCTCGGAAGGGGGCTAGGAAGGGGGCTCCGAAGGCGACCACTGAGGTTCCTGCTACTGAGGT TCCTGCCACTGAGGTTCCTGCTACTGAGGTTCCTGCTACTCAGGTTCCTGCTACTGAGGTTCTTGCTCTCTCGACGCCTG AGGTTACTGCTACTGAGGTTTCTCCTCAGTCGACGCCTGAGGTTACTGCCCACGATACTGTTGAGCCTTCCACCTCTTCA CTTGATATTGATGCAGTTGAGGAGCCATTGGAGTCGGAGTCGGAGTCGGGGTCTGAGTCTGAGATTGAGGGTGAGGATGT AGAGGTAGAGGATCCGAATATGTCGCCGCTCCAGAGAGATCCACTGTTTCCTGGTGGGCCGGTTGAGTTTTCACTTCTGC AGCATTACCCGGATCACATAGCGCCGTGGACGTGGCATACCCTACTAGGCACCACTGACCACCTCGTTATTATGAGCGAG GTTATTTGAGGCTTGCCACTGCTGGTACGAAGCTCGGGCTGATGACGTGTGAGGGGGACAATTACAGGGAGGTCCACTTG ATTGTGGAGAGGAGCGGACTGTATCCACTGGTCAGGTGCAGCTATGTAGAGACGGACCCAGGGCTTATATCGGCCCTTTT GGAGAGGTGGCACGAGGAGACTAGTAGTTTCCACATGCCATTCGGGGAGATGACTGTCACCCTTGACGACGTCTCCGCTC TTCTTCACATCCCGGTTGGTGGGAGATTCTACACTCCAGGAGTGGCCTCGAGATATGATGTGGCAGAGACCTGCGCTTTG CTGTTAGGGGGGGATGCAGATTTGTACATGGCTGAGTTTGATGTGAAGAGGGGTCCGACTATGAGGTTCAGCTTCTTGCG AGACCTTTACCCGACAGCTGTTGCAGGTTTGTTTCATTCATTATCTGAACTTTTTCCAACTATTATTTATATTTACTTAA TCATAATTGGTATTACATTGTAATGTAGAGGGGCGGTACGAGCATGCAGCCAGGATGTACCTGATGCATCTTGTTGGCGC GACATTGTTCGCCGACAAGAGTGGGGGGCACTCATTCTCCGCCCGTTGGATCGGCATGCTACAGAATCTTGAGCGGGTGT CGGAGTTCGCGTGGGGCGCCATGGCCCTTGCCACATTGTACGACCAGCTTGGACAGTCTTCTCGCAGCGGGGTCAAACAG ATGGGCGGTTACATGTCCCTGTTGATGGCCTGGGTCTTTGAGCACTTTCCAGACAAGCTTGTTCGCCGGTATGCGAACCC GTCTTACACAAAGGACCAGCCCAGAGCTTGTAGGTGGACAGAGTCACGGTCGGGGCATGCTAGGCTTGACGAGAGGCGAG TACTACTTGATGAGTTGACGGCCGACGACGTCACTTGGACTCCATATGAGGCCCACAGGGAATGGCGACAGCGGGATGAG AGGGCTTTGTTCTCAGGCTACATTCGGTGTCCCTATCCCCCTGCTGTGCGACCTCATCTTTCGGAGCGGGTCATGCGACA GTTTGGGTATATACAGACGATCCCGCGCCACCCTAGTGAGATGGATAGATCTCCCGCAGCTGAGGCTGTTGATGCGGCAT TCGCAGATTATGTGTAGTACTTGTTCCCTGAGGGCGACCCTGCTATAGAGG
CDS sequence (LotjaGi6g1v0291400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCTGATGCATCTTGTTGGCGCGACATTGTTCGCCGACAAGAGTGGGGGGCACTCATTCTCCGCCCGTTGGATCGG CATGCTACAGAATCTTGAGCGGGTGTCGGAGTTCGCGTGGGGCGCCATGGCCCTTGCCACATTGTACGACCAGCTTGGAC AGTCTTCTCGCAGCGGGGTCAAACAGATGGGCGGTTACATGTCCCTGTTGATGGCCTGGGTCTTTGAGCACTTTCCAGAC AAGCTTGTTCGCCGGTATGCGAACCCGTCTTACACAAAGGACCAGCCCAGAGCTTGTAGGTGGACAGAGTCACGGTCGGG GCATGCTAGGCTTGACGAGAGGCGAGTACTACTTGATGAGTTGACGGCCGACGACGTCACTTGGACTCCATATGAGGCCC ACAGGGAATGGCGACAGCGGGATGAGAGGGCTTTGTTCTCAGGCTACATTCGGTGTCCCTATCCCCCTGCTGTGCGACCT CATCTTTCGGAGCGGGTCATGCGACAGTTTGGGTATATACAGACGATCCCGCGCCACCCTAGTGAGATGGATAGATCTCC CGCAGCTGAGGCTGTTGATGCGGCATTCGCAGATTATGTGTAG
Protein sequence (LotjaGi6g1v0291400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLMHLVGATLFADKSGGHSFSARWIGMLQNLERVSEFAWGAMALATLYDQLGQSSRSGVKQMGGYMSLLMAWVFEHFPD KLVRRYANPSYTKDQPRACRWTESRSGHARLDERRVLLDELTADDVTWTPYEAHREWRQRDERALFSGYIRCPYPPAVRP HLSERVMRQFGYIQTIPRHPSEMDRSPAAEAVDAAFADYV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 185 | 184 | 1.8E-21 | – | |
| PANTHER | 2 | 185 | 184 | 1.8E-21 | – | |
| Pfam | 2 | 180 | 179 | 4.9E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0291400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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