Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0294800 |
| Transcript ID | LotjaGi6g1v0294800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | senescence regulator (Protein of unknown function, DUF584); TAIR: AT1G11700.1 senescence regulator (Protein of unknown function, DUF584); TrEMBL-Plants: tr|I1M104|I1M104_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0294800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61292332..61294308) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATCTCAAGGTGGAGGTTTGTTTTATAGGTATACAAAACTTTACTATTCATTGCCACCACAGTGGCGGGCCATTCA TCACAACATTTGTTAATGTTTCATTTATTTTTAATGTTCAATGTCGTCATTACTTCAATTCATATGATCCATTTTTTTTC TTTCATTTTTAATTTGTTTTCACCATAACACAACAGAGTCAACTAAATTCAGACAAAATGAACCCCAAACTCAAATGAAA TTCCAAACATTCTAGTTAAATACAGAGCAAGTGGCACACTCTCATGTCTCAACCAAAAACTAACAGCAATAGCAATGGAC TCATAATAGTAGTAGTTGTAGTAGTATACACCCCATTTACATCTTCACAATCAACTCTCCGAGCGGTGGCGCAACCCGAT TCCGCCGCCGCAGATGGCGAAAGGTCGCAAGTTGACTACAAGCCGGAGCGAGCGCTTCTTGGGAGCCTACGCCAACAATC ACACCCAAGCCCCCAGCGACTCATCCGAGCTCCGGGAAGAGGATATCTGGTCCACCGGCGATGATGCCGGCGGCGATGTC TCCGTTTGGGAGCCAGACGATGTCGCCGATGAGAGCTCCGGCGGCTCCGCCTACCGGCGCCGGATTCACCGGGATGTGAA CAAGAGCAACCACCACCAATTCGGTGGCCTGTCGCTGGCGTTCGAGGACCCGCCGGCTGGTGGTCCGGTGACGGCGTCGG CGAGGATCGTGCACCAGCTCCGCGCGCATGATGGTCTGGCCTCGACTCCGAGAGGACGCCACGTGGCGTCCTCCGCGCCG ATGAACGTGCCGGACTGGAGCAAGATACTCCGGGTTGACTCGGTCGAGTCGCTGCACGGTGTGGACGACGATCTCGATGA GAGCGAGTTGGAGGTTGTTCCGCCGCATGAGTACTTGGCGCGCAGCCGTAAGAAGGCGGCGGATTCGGTTTTCGTGGGAG TGGGCCGGACGTTGAAGGGCCGGGACTTGAGCCGGGTTCGTGACGCCGTTTGGAGCCAGACCGGGTTCAACGGTTGATGG CCCGGTTCAGGTGGGTAAGTTAAGTGAGTGGTTCTTTCTTCCTTCCACCCTGTTTGTAATCTGAGTTGATTGTTAAGTAT GATTATTGTTGTTAATTAATCAGATTCAACTTAGTGGTTTGTTAAAGTAATTAAATTACTACTACTTGTTTAATTTGAAT GGGTGGGGCGATGACTCGGTTGGGTGGACTCAGCTGAAGGGAGTTCAACTCAGTGGCCAGTGAGCCTAAGCAGTAATTAG CATGTAATTGGTAAATTTATATTTCTGAGGATAAGGGTTTTGATTTTGGATATTACTATGTCTTTCAAGTTTCAACCTCT GTTTGTTCAAGGGAGAATTAGCTATTGTTAATTGTCAAGGACAAGCAAATTGTAAATATAAGTTGTTAATTAGTTCACAA TCACTTTTTCTTCTTTTTTTTTTTCTCTTTTTATTTCCTTATTTTGTCTTATCATGTATTCATTATTAGACCTTTCATTT TTCTATTCTATATCCCATTTTTCTGTGGCCGAGTTTAATTGGAATTTCAACCAAAAAATTTTCTATATATACATCAATTT GCACCAAACACAGTTAAACTAACAAGTTACATGTCATGGCAGACAGGAAGCAACTTGTCATTAACTTAATTAATAGTTTT GTTAGAACTAAAAACCAAATGCCAAATAATTATGGTTTGGCAATAATGAGACTTGCATCACCCTCTTTTAAAAAAAGTAG TGTTGTGGCTTGTGAGGACACTTTGGTGGAAAGGAATCATTTGAATTGTTAAAAAAAATTAATTATGTCAAGTTTCATCA CCTAATCATTAATTTTAAAATTTTAAAATATTTAATTATCAAACACTCAAAAACTAATAATAATTAATTATATAACTTGT CATGATCATTTTTTTAAGATGAGGTGATCTATCTCGCACTTTTGTTGGTTGGTTCTA
CDS sequence (LotjaGi6g1v0294800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAAGGTCGCAAGTTGACTACAAGCCGGAGCGAGCGCTTCTTGGGAGCCTACGCCAACAATCACACCCAAGCCCC CAGCGACTCATCCGAGCTCCGGGAAGAGGATATCTGGTCCACCGGCGATGATGCCGGCGGCGATGTCTCCGTTTGGGAGC CAGACGATGTCGCCGATGAGAGCTCCGGCGGCTCCGCCTACCGGCGCCGGATTCACCGGGATGTGAACAAGAGCAACCAC CACCAATTCGGTGGCCTGTCGCTGGCGTTCGAGGACCCGCCGGCTGGTGGTCCGGTGACGGCGTCGGCGAGGATCGTGCA CCAGCTCCGCGCGCATGATGGTCTGGCCTCGACTCCGAGAGGACGCCACGTGGCGTCCTCCGCGCCGATGAACGTGCCGG ACTGGAGCAAGATACTCCGGGTTGACTCGGTCGAGTCGCTGCACGGTGTGGACGACGATCTCGATGAGAGCGAGTTGGAG GTTGTTCCGCCGCATGAGTACTTGGCGCGCAGCCGTAAGAAGGCGGCGGATTCGGTTTTCGTGGGAGTGGGCCGGACGTT GAAGGGCCGGGACTTGAGCCGGGTTCGTGACGCCGTTTGGAGCCAGACCGGGTTCAACGGTTGA
Protein sequence (LotjaGi6g1v0294800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKGRKLTTSRSERFLGAYANNHTQAPSDSSELREEDIWSTGDDAGGDVSVWEPDDVADESSGGSAYRRRIHRDVNKSNH HQFGGLSLAFEDPPAGGPVTASARIVHQLRAHDGLASTPRGRHVASSAPMNVPDWSKILRVDSVESLHGVDDDLDESELE VVPPHEYLARSRKKAADSVFVGVGRTLKGRDLSRVRDAVWSQTGFNG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| PANTHER | 1 | 207 | 207 | 6.5E-74 | – | |
| PANTHER | 1 | 207 | 207 | 6.5E-74 | – | |
| MobiDBLite | 14 | 28 | 15 | - | – | |
| Pfam | 31 | 205 | 175 | 5.2E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0294800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…