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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0298200 |
| Transcript ID | LotjaGi6g1v0298200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT3G06120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE; TrEMBL-Plants: tr|A0A0S3S3P6|A0A0S3S3P6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0298200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61597077..61598822) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCTCACATAACCGTGGAGAGAAACAGAAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGGACCTTGACTCCATG TTTCTATATTAAAAGGGTACTATTATACCTCTATTTCTCTAATTTCTTAATATTGGTTTGTTTGTTGTGTTTTTGTGATC GGTTCATGATGATTGAGTATTTTTCATGGTGTTTGATTTTATTAGGGAGATCAAGCATCTATAATAGGGGGAGTGATAGA GTTCATCAAGGAGTTGCACCAAGTCCTTCAAGCTTTGGAGTCTCAAAAGAGAAGGAAGAGTTTGAGCCCTAGCCCAGGCC CAAGCCCAAGAACAGTTAAGCCAAAACTAGTTCATCATGATCAATTTGATGGCTCCAATGGAATTGGGAGTAACAGTTTC AAGGAACTTGGAGCAAGCTGCAATTCTTCCGTTGCGGATGTGGAAGTGAAAATCTCGGGTTCGAATGTGATTTTGAAAGT GATTTCTCACAGGATTCCAGGACAAGTTGCGAAGATCATCACCGTTTTGGAAAGCCTTTCATTTGAGGTCCTTCATCTGA ACATCAGTAGCATGGAGGAGACTGTCCTATACCAATTTGTTGTCAAGGTAATTAAGAGATTCTTTTGATAATTAATGGTT TCAGAAATTTCATATTTAGTAACATTAATCTCCCTTGATTTTTTTTAGACTTATATACAGTAATTAAAAAATACACAGTG GGATTCTCAATTAATCTAATCTATTCTCGTAGCTATTAGAATTTATTGCTTGTCAATTAGGGTTTCAAGCCAATTTGATT ATCAACAATTATTTATTTGTTCTTACATGAGCACATTATTTGTAAACACCAATAATCAAAAGCTCTAAATAACTTATTTA TGAACTATCCATCTCTAGTTTTTCTTATCCAAAATGAATTCATAAATAAGCAGAAGGGGTGCTTAAACTCGGTTTACAAA AAGAAAAGAAAAGCTAACTTTCAATCTCAAAGAGAGATTTGCAAGAAAAAAATGAGGGGGTTAAACAATAGCACAACCAG ATGCAGTGTCAAGTACAAAGGAAATTAAAACCAAACAAGCCACAACAGGGTACCACACAAAAACAGTCACTGCAACACAC AGCGAGAGGCACACAGACAGACACAGCAAGTCGAGCAACAGTGGCCAAAGTACTTCCAAGCAATATCAATAAATACTCCA CGAGCAGTGCTATGTGGCTCGAATGATCATCAATTTATTGAATAATTTGTTGTGGTGCTTTGTCCAGCAACATTTGTGTT CATTCAAAACTGAAATTCCTCGGCTATTCATGTCCCATGAATCCATACGTAAACTTCGAACATGTATTCTTCTAGGATAT ATAGCCAGCATATCATGCATATAACAATGAACTAGTGAGAAATAACCCAGTTCTATGAGGATGCTGATCGCACACGAGTG AAAGAGAATATAAGTAACAAATTTAATGTAAGAAATATTGAAATTTTCAAGTACATAAATATTGGATATATGATCTTTAT CAATTAGAGTGTCCATTATCTTTGCTTATTTTTTGGTTCAAATATAATTAATGAATCTAACTTGCAATATTTTGATTTTG GTTATTAATATTACTCATCGTGCTCTTTTGTTTTATTCTTCTCACTATTACAGATTGGGCTGGGATGTCAACTAAGCCTG GAGGAACTAGCGATGGAAGTACAACAAAGCTTCTGCTCAGAATAAATGAAGTTAACTGTGCTGTGA
CDS sequence (LotjaGi6g1v0298200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCACATAACCGTGGAGAGAAACAGAAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGGACCTTGACTCCATG TTTCTATATTAAAAGGGAGTTGCACCAAGTCCTTCAAGCTTTGGAGTCTCAAAAGAGAAGGAAGAGTTTGAGCCCTAGCC CAGGCCCAAGCCCAAGAACAGTTAAGCCAAAACTAGTTCATCATGATCAATTTGATGGCTCCAATGGAATTGGGAGTAAC AGTTTCAAGGAACTTGGAGCAAGCTGCAATTCTTCCGTTGCGGATGTGGAAGTGAAAATCTCGGGTTCGAATGTGATTTT GAAAGTGATTTCTCACAGGATTCCAGGACAAGTTGCGAAGATCATCACCGTTTTGGAAAGCCTTTCATTTGAGGTCCTTC ATCTGAACATCAGTAGCATGGAGGAGACTGTCCTATACCAATTTGTTGTCAAGATTGGGCTGGGATGTCAACTAAGCCTG GAGGAACTAGCGATGGAAGTACAACAAAGCTTCTGCTCAGAATAA
Protein sequence (LotjaGi6g1v0298200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSHITVERNRRRQMNEHLKVLRTLTPCFYIKRELHQVLQALESQKRRKSLSPSPGPSPRTVKPKLVHHDQFDGSNGIGSN SFKELGASCNSSVADVEVKISGSNVILKVISHRIPGQVAKIITVLESLSFEVLHLNISSMEETVLYQFVVKIGLGCQLSL EELAMEVQQSFCSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 173 | 173 | 3.2E-83 | – | |
| PANTHER | 1 | 173 | 173 | 3.2E-83 | – | |
| ProSiteProfiles | 1 | 50 | 50 | 9.953 | ||
| CDD | 1 | 34 | 34 | 2.37523E-5 | ||
| SUPERFAMILY | 1 | 49 | 49 | 1.7E-7 | ||
| Pfam | 2 | 43 | 42 | 2.4E-5 | ||
| MobiDBLite | 44 | 64 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi6g1v0298200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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