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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0298800 |
Transcript ID | LotjaGi6g1v0298800.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Cytochrome P450 family protein, putative; TAIR: AT3G06150.1 cytochrome P450 family protein; Swiss-Prot: sp|Q52KP5|NXPE4_MOUSE NXPE family member 4; TrEMBL-Plants: tr|I1M151|I1M151_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0298800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:61648960..61654698) extracted from Lotus japonicus Gifu genome v1.2.
GGGTGCCAAACCCAACTCCCCTCATCATGTGTTCAATTCTGAGAGTTAAAGTTACCATAACCAAGGTTAGTGATTCTGCA ACTTCTGTGCCACCACTCAACTGTCTCTGAAATGGGTCACATGCCATTAAAACCCACCTTCACCTTGTGAGAGAGAGAGA ACCCAAGTCCCAGAGTTTCATTTTTATTTTATTTTTCCCTTCTCTTTCTCGAGAAAATCCACCTTTTTCTATGCTTTGAA GGTACTCTTTTGGAGTGTTGTAGTTAAAGTTACCAACGTTGCTGTGTTGGGTAACTTTGGCATTTTGGGATATCATAGCT TTGATTTGTTTGTTGCTGTTCTTCTGTTGTGGTGGTGATTTTGGAAGTTTCTCATGATGCCAGAAAAGGTGGAGAAAAAC AAGCCTTTTTGGTCTAATCCAATACTCAATTGGCGTGTTGGGTTGCTCACAGTTCTTGTTTTGGTTGGCATGTTCGTGAT TTGGAGTGTTGATGGCTGCACTGTTAGCAACTTCATTGATGCTTGGAGGTACCATCAAGATTCTTTTTCTCTAAGGTCTC ATTCTCCTAATGTGTCTCATTCACATCAAAATATCAGTTTTATTCCCCCTTATAGTCCTGTTAGTTTGAATCAAAACCAA ACCAATACTACAAACTTTGATTCCTACAGTGAAACAGTTTCTGCTGTGAAATCTAGTTTATCTGATAAGCTTGAGAAAAC TCCAGTTAGAGCTGAAGTTCTGGGGCATTCAACTTGGCTTTCAACTGAATTAGAGCCCAATTTTACTTCAAATCTTCTAG CTAGATGGTTAGCTCGTGGAGGAGAACCTTGTAAAGATTCTAAGACTGTGAAAATTTCAATTCCTGGGTTGGATAATGAT GGGAAAATGATTGAGCTTTCAGCTGGAGATTTGCATGAGTTTAGTTTTCAAGCATTGGATGATTTAGGGAAGCCTCGCTG TTTAGGTGGGGATTACTTTGAGACTGATCTTTCAGGTGAATCATGGAAATCTAGGCCTTTGGTGAAGGATTTCAGTAATG GTTCTTACTCCATTTCACTGCAGGTCCATCCTGATTTTAATGGGGTGTACAATCTCACTGTAATTTTACTTTATAGACAC TTTGAGGGTCTGAAATTCACTCCATGGAAATTTGTTTATGATAGATTGCTTTGCAATGTTCAAATCAGATTCTACAAAAG CACTGCTCGGTTACCGGAACTAGAGACTTGCAAAGCTTCTGATTTTGGCAAGGATGTTTGGTGTGGAAGGTGGACAAGGC ATGGGAAAAATGATGATTGCCAGATAGGTAATGATGGTAGGTATAGATGCTTAGCACCTGATTTTCCTTGCAAAGCTCCA TGGTGTGATGGTTCCTTGGGAATTCTAGAGAGTAATGGTTGGGTTTACTCAGCACATTGCTCATTCAAGATGTATTCAGC AGAGTCTGCTTGGAAGTGCTTGAAAAATAGGTGGATTTTCTTCTGGGGTGATTCAAATCATGTTGACACGATACGCAACA TGCTCAATTTTGTTCTAGAATTGCCAGAAATACACTCAGTCCCTAGAAGGTTCGACATGAACTTTTCTAATCCGAAGGAC TCATCTCAAACAGTTAGGATTACAAGCATCTTCAATGGACATTGGAATGAAACAAAAAACTACCTAGGATTGGATTCTCT GAGAGATGAAGGGTTCCAAAATCTGTTGAGGAAGTACTTCTCAGGGGACACAATCCCAGATACCGTGATCATGAACTCGG GCTTGCACGATGGTGTTCACTGGCGTAATGTGAGAGCTTTTTCAACCGGAGCAGACTATGCAGCGTCATTCTGGAAAGAT GTTATGGGAGCAGTGAGGCAAAGGGGGTTAGCATGGCCAAGAGTATTTTACAGGACCACAGTTGCAACTGGTGGATATGC GAGATCACTGGCATTTAATCCTAACAAAATGGAGGTGTTCAATGAAGTGTTCTTGGAGAAGTTGAAGGAAGCTGGGATTG TATCCGGGGTGATTGACAATTTTGACATGACATTTCCATGGCATTTTGATAACAGGTGCAATGATGGAGTTCATTATGGA AGAGCTCCTATAAAGATGAAGTGGCGAGATGGCCAAATTGGTCATCAGTATTTTGTAGATCTCATGTTAGCTCATGTTTT GCTCAATGCACTTTGTGAAAGATAGCTAATGGAATGGAAAACTTGCCTGTAAAGGAGTCTATGGGTTGAAGTATAGGCAT GCTCTAGAATAATGCACAGAATTCTAGTGGTTGGAAACAGCCTCTTGCGTAAAAAGCATGGTAAGACTATGTACAATAGA CTTAGTGGTCGGACCCTTCCACGGACCCGCTCATAGCGAGACTGCGAGAGCTTTGATCAACCGGGCTGCCCTTTTTATTG TGGTGGCTGGATAATGATGATTGAAGTGGCTTCCACCTTGTTGGTACTCTTTTGTTTCCATATTATATGAGTTAGATTAA GCATTGGATGAAATGAGATTAAGCATTCTTTCTTGTTCATAGATTGTAAGCTAAGTTGTTGATACAGGAGTTCAGATTCT AGATTAGCCGAGGATTTGTATTCCTTCAAATTCATTTGTCTATGTATAATTCATGTAAAATTTTACAGGGATTGCAGATA TGTACTAGACCAGGTCTTTTTCCAAGAGCACTACAACTTTGGTATAAAAAAATGGGAGCAGATTATGCAATGGTTAATTA ATGTGCATGTAAATGCAGCTCAGACAGATTTTCAACCATGTAGTTCCACTGGTACGCTATTCTTTTTTTTGAAAAGCGCT ACTCCCTCACTTTCTTCCTTGTGCTTTTGAGAGTCAAAAATAGCCTGTAAATTTTAGCAGCAGTGTCTTTCACTAAGGGC CAATCTTGGCCTTCTTGAGGCATGCTTCAGACAGGAAGCCAATATTGCATCAATCCAGGAGCTTTGAATCCCTTTGATAC TTCAACATAATCTTCTGATATTAATGTCACAATTTCTGATTGATTTGCTGGTAGGATAAGGAAAGTTCCTACTTCCTTGA AAGCATTCATGTTTTTATTCATGTTCCTATTTAAAAGAAAAAAGAAAAAGAAAAAAAAGGATAAGCTTTTACTCGGCCTA ACCATATAGTATTCTAATATTGTTCATGTAATACTAAAACTCCTTCCATAAAAGCCCCTGATAATTTTCAATTACCAGTC CTAATTACTCGTGAATCTAAGTTTTTAAGTGTTGATGAAAAGCTTTTATAAATCACTTACATATGCAGTGTACTCATGAG TCATGACACTTCCATTTAAATGAATGGCACAACCATATGTCTCCTTTGTAGTCCTAGGTATCCAGCATAAGTGCTATAGA ACTAGGGGGTGTCAAAGTGTGTTCAACCAACCAACCTGCAATTGCGAGACGGGACGAGCAAGACAATTACAACCCGCGAA CTAGTAAAAACTTCCCCGCACAACCTGTTAGCCTGTCGGGTCAGGCCGACACCAGTGAGTCATTCCACAGGTTTCAGTTA TTTTTTAAAAAATCTTAAACTCGCTTCCCTGGTCCAAAACCTCAGCCCATTTTATTAAAAATAAATCCCTGAAGTTAGAG ATTGTCCAGATACATCAACACTGGTTCCTCAAACTTGCTCAGTTCCTCTCACTCATCTATTCAGCTCCCCCACCCCTCTC AGGTTAGGGTTTAACTACACCGCCGCCGGAAGCCCTCTCCTCGCAGCCCAGCCGCCGTGACAGCTCGCCGGTTAGTGACT CATGGGAGACACTGTATGCTCTGCTCTCATGAACACCCCTCTTCCACCTAAGCTGTCGCAGCAGCACCTCCCTGAAGCCC TCATTGCTGAAGTGTTATCATGGCTTCCGGTGAAAGACCTCACCCGATTCAGGTGCACGTGCAAGGGTTGGAACACCCTC ATCTCTGATCCCACCTTCATCAAATTGCACCTCCGTAGATCAGCAACACGGAACCCCCACCTCTTGTTAGATTTCACCCC CTTACCTGTAAGTCGTTTACTTGAGAATTCACCGACCATGCTTGTCTATGATCGTCCCCGCCGGTTGAAGAGTAATGGAT TGAAACCCTACATAGTCGTCGGTTCATGCAACGGGTTGATATGCTTGCACTGTCTTTCTTACAAAAGCCGAAAGAGCTGG CTTTGTTTCTGGAACCCGGCCCCGAGGTTAATGTGTGATAAATTAGGGTATTTTTGTACTGATAGCATGAATTTCAAGCT CACCTTTGGATATCATAATTCAACGGACACTTTTAAGGTTGTGCTTTTTGATTTTAAAAGAGCTCAGGTGAGAGTTTTCA CCTTGGGTAGTAATTTGTGGAGGGACATTCAAAATTTGCCCCAGTCTACTATTCTGCACAACACTTCCAGACCAAATGGA GTGAATTTGAGTGGCACTCTTAATTGGTTGGCACTTCCTCACAATTGCCATGCTTCTTATGAACATAATAAGGATATTAC TGTTGAGCAATTTATGATTATTTCGCTTGATCTGGGAACGGAGACTTACACCCAGATTCTGATGCCTCGAGGTTTTGATG AAGTGCCTTTTCTTGAGCCAAATATTGGGGTTTTGATGGATTGTCTGTGTTTTAGTCATATTTGGAAGAGAACCCACTTT GTGATATGGCAGATGAAGGAGTTCGGCGTTGAGAAGTCTTGGACTCAATTACTGAAGATTAAGTATCAGGATCTTCATAT GGATCCTCATACTAGTGCCTTCGAAAATCAATATCAACTGTTTCCATTGTGCTTTTACAATGGTGACACATTGGTGTTGG CAAGTTTTGCCGGCGATCAAGCGATACTATATAATAGGAGAGACAATACATCAGAGACAACTAGATTTACAAATATAATT GGTTGGTTGACTTGGTTCCGTGCCATGGATTACGTTGAAAGCTTGGTTTCCCCTTACTGAGACTTGAGAGTAAGTTAATT TTCAACACTTTATTTGTATGAATTAATTTTAAATCACTGTTTTAAAATCCTTGTCATTTCATACGAGAATATAGTAAAAC AATCATTGATCGATAAACCTGTTAATAGTTGCTTTGCAATGTCCAAATCAGATTCTTAATCCATTTTGCTGCTGCAACCT GAATTCTTGATTTTAATGGGATGTGCAATCTCACTATAATTTTACTTTATATACACTTAGAGGGTCTGAAATTCACCCCG TGGTAATTTGCTTATGATCAATTGCTTTGCAGTATTCAAATCAGATTCTACTGAAGCAATGTTCATTTACCGGAACTACA GAGTTGCAAAGCTTCTTAGTTTGGCAAGGATGTATGGTGTTGAAATGGACAAGGCATGGGGAGAATGATGATTTCCAGAT AGGTAATGATGGTAGATATAGATAGCACCAGATTTTCCTTGCAAAGCTCCATGGTGTGATGGTTTCTTGGGAATTCTAGA GAGTAATGGATGGGTTTACTCAGCTCACTGCTCATTCAAGATGTATTCAGCCGAGTCTGCTGGTAGTGCTTGAAAAATAG GTGATTCAAATCATGTTGACACAATCCGCCATATGCTCAATTTTGTTTTAAATTTTCTTGAAATACACTCAGCCCTCCGA AGATTTTGTTTCAACCTTTTTGATTATTCTTAACTGAATTAATATATCGGAATGTAACGTATCAGTTACAATCTATTTTA TTTAATATGTATTATGACATTAAAGTATGATTATAATGACATTTTATATATTTGTTTGC
CDS sequence (LotjaGi6g1v0298800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCCAGAAAAGGTGGAGAAAAACAAGCCTTTTTGGTCTAATCCAATACTCAATTGGCGTGTTGGGTTGCTCACAGT TCTTGTTTTGGTTGGCATGTTCGTGATTTGGAGTGTTGATGGCTGCACTGTTAGCAACTTCATTGATGCTTGGAGGTACC ATCAAGATTCTTTTTCTCTAAGGTCTCATTCTCCTAATGTGTCTCATTCACATCAAAATATCAGTTTTATTCCCCCTTAT AGTCCTGTTAGTTTGAATCAAAACCAAACCAATACTACAAACTTTGATTCCTACAGTGAAACAGTTTCTGCTGTGAAATC TAGTTTATCTGATAAGCTTGAGAAAACTCCAGTTAGAGCTGAAGTTCTGGGGCATTCAACTTGGCTTTCAACTGAATTAG AGCCCAATTTTACTTCAAATCTTCTAGCTAGATGGTTAGCTCGTGGAGGAGAACCTTGTAAAGATTCTAAGACTGTGAAA ATTTCAATTCCTGGGTTGGATAATGATGGGAAAATGATTGAGCTTTCAGCTGGAGATTTGCATGAGTTTAGTTTTCAAGC ATTGGATGATTTAGGGAAGCCTCGCTGTTTAGGTGGGGATTACTTTGAGACTGATCTTTCAGGTGAATCATGGAAATCTA GGCCTTTGGTGAAGGATTTCAGTAATGGTTCTTACTCCATTTCACTGCAGGTCCATCCTGATTTTAATGGGGTGTACAAT CTCACTGTAATTTTACTTTATAGACACTTTGAGGGTCTGAAATTCACTCCATGGAAATTTGTTTATGATAGATTGCTTTG CAATGTTCAAATCAGATTCTACAAAAGCACTGCTCGGTTACCGGAACTAGAGACTTGCAAAGCTTCTGATTTTGGCAAGG ATGTTTGGTGTGGAAGGTGGACAAGGCATGGGAAAAATGATGATTGCCAGATAGGTAATGATGGTAGGTATAGATGCTTA GCACCTGATTTTCCTTGCAAAGCTCCATGGTGTGATGGTTCCTTGGGAATTCTAGAGAGTAATGGTTGGGTTTACTCAGC ACATTGCTCATTCAAGATGTATTCAGCAGAGTCTGCTTGGAAGTGCTTGAAAAATAGGTGGATTTTCTTCTGGGGTGATT CAAATCATGTTGACACGATACGCAACATGCTCAATTTTGTTCTAGAATTGCCAGAAATACACTCAGTCCCTAGAAGGTTC GACATGAACTTTTCTAATCCGAAGGACTCATCTCAAACAGTTAGGATTACAAGCATCTTCAATGGACATTGGAATGAAAC AAAAAACTACCTAGGATTGGATTCTCTGAGAGATGAAGGGTTCCAAAATCTGTTGAGGAAGTACTTCTCAGGGGACACAA TCCCAGATACCGTGATCATGAACTCGGGCTTGCACGATGGTGTTCACTGGCGTAATGTGAGAGCTTTTTCAACCGGAGCA GACTATGCAGCGTCATTCTGGAAAGATGTTATGGGAGCAGTGAGGCAAAGGGGGTTAGCATGGCCAAGAGTATTTTACAG GACCACAGTTGCAACTGGTGGATATGCGAGATCACTGGCATTTAATCCTAACAAAATGGAGGTGTTCAATGAAGTGTTCT TGGAGAAGTTGAAGGAAGCTGGGATTGTATCCGGGGTGATTGACAATTTTGACATGACATTTCCATGGCATTTTGATAAC AGGTGCAATGATGGAGTTCATTATGGAAGAGCTCCTATAAAGATGAAGTGGCGAGATGGCCAAATTGGTCATCAGTATTT TGTAGATCTCATGTTAGCTCATGTTTTGCTCAATGCACTTTGTGAAAGATAG
Protein sequence (LotjaGi6g1v0298800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMPEKVEKNKPFWSNPILNWRVGLLTVLVLVGMFVIWSVDGCTVSNFIDAWRYHQDSFSLRSHSPNVSHSHQNISFIPPY SPVSLNQNQTNTTNFDSYSETVSAVKSSLSDKLEKTPVRAEVLGHSTWLSTELEPNFTSNLLARWLARGGEPCKDSKTVK ISIPGLDNDGKMIELSAGDLHEFSFQALDDLGKPRCLGGDYFETDLSGESWKSRPLVKDFSNGSYSISLQVHPDFNGVYN LTVILLYRHFEGLKFTPWKFVYDRLLCNVQIRFYKSTARLPELETCKASDFGKDVWCGRWTRHGKNDDCQIGNDGRYRCL APDFPCKAPWCDGSLGILESNGWVYSAHCSFKMYSAESAWKCLKNRWIFFWGDSNHVDTIRNMLNFVLELPEIHSVPRRF DMNFSNPKDSSQTVRITSIFNGHWNETKNYLGLDSLRDEGFQNLLRKYFSGDTIPDTVIMNSGLHDGVHWRNVRAFSTGA DYAASFWKDVMGAVRQRGLAWPRVFYRTTVATGGYARSLAFNPNKMEVFNEVFLEKLKEAGIVSGVIDNFDMTFPWHFDN RCNDGVHYGRAPIKMKWRDGQIGHQYFVDLMLAHVLLNALCER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 19 | 19 | - | – | |
PANTHER | 11 | 602 | 592 | 3.6E-290 | – | |
PANTHER | 11 | 602 | 592 | 3.6E-290 | – | |
TMHMM | 17 | 39 | 23 | - | – | |
Phobius | 20 | 39 | 20 | - | – | |
Phobius | 40 | 603 | 564 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0298800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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